CK935377
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935377 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.741e-17 Identity = 53/171 (30.99%), Postives = 83/171 (48.54%), Query Frame = 2 Query: 158 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRNRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-----------RQRHWYIQSTCATSGEGLYEGLDWLS 637 KK+ I+ VGLD AGK+T+L LK T PT + + +I F +D+GG + R LW Y N+ G++F+VDS D +R E+R L +L+ +L +L+ +NK D+ A++ + G+ L QR + + G +G WLS Sbjct: 18 KKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLRSDQRPLEVFPCSVINRFGYTDGFKWLS 188
BLAST of CK935377 vs. ExPASy Swiss-Prot
Match: CIN4_YEAST (GTP-binding protein CIN4 OS=Saccharomyces cerevisiae GN=CIN4 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.274e-17 Identity = 49/137 (35.77%), Postives = 79/137 (57.66%), Query Frame = 2 Query: 161 KEMRILMVGLDAAGKTTILYKLKLGEIVTT---IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRNRIVEARDELHRMLNEDELR---DAVLLVFANKQDLPNAMNAAEITDKLGLH 553 KE+R L++GLD +GK+TI+ KL + +PT+GF + ++ K+++ ++WD+GGQ +RP W +YF TQ +I+ +D + R E EL ++N DE R + ++V NK DL + DK LH Sbjct: 15 KEIRCLILGLDNSGKSTIVNKLLPKDEQNNDGIMPTVGFQIHSLMIKDVTISLWDIGGQRTLRPFWDNYFDKTQAMIWCIDVSLSMRFDETLQELKELINRDENRIGYECAVIVVLNKIDL--------VEDKSELH 143
BLAST of CK935377 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17 Identity = 54/156 (34.62%), Postives = 86/156 (55.13%), Query Frame = 2 Query: 161 KEMRILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRNRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLG-LHSLRQRH-WYIQSTCATSGEGLYE 619 ++ +L++GLD +GK+T L L + +PT GFN + KN + ++G +R W+ + L+F+VDS DR R+ AR EL ++L+ D D +++ ANKQDL AMN E+ +LG L S QR + + ++ A +G G E Sbjct: 75 EQREVLVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDP--DLPVVIVANKQDLSGAMNMVELQQELGLLASYNQREVFLLAASIAPAGSGFGE 228
BLAST of CK935377 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17 Identity = 52/141 (36.88%), Postives = 82/141 (58.16%), Query Frame = 2 Query: 122 LTFTK-LFSRLFAKKEMRILMVGLDAAGKTTILYKLK--LGEIVTT---------IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF-QNTQGLIFVVDSNDRNRIVEARDELHRMLNEDELRDAVLLVFANKQDL 505 ++F K LF L KK ++++G++ GKTT+LY + E +TT IPT GFNVE++ + + F +WD+GG++ R +RHY +IFV DS+D N + E++ E + N+ L++ L+ ANKQDL Sbjct: 5 ISFIKNLFGFLTIKK---VMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDL 142
BLAST of CK935377 vs. ExPASy Swiss-Prot
Match: ARL9_HUMAN (ADP-ribosylation factor-like protein 9 OS=Homo sapiens GN=ARL9 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.128e-15 Identity = 47/132 (35.61%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 158 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRNRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 550 +K +IL++GLD AGKT++L+ L + ++ PT GF+ + ++ ++GG R W Y LIFVVDS D +R+ EA+ LH+++ + + L+VFANKQDL A + +I + L L Sbjct: 16 EKNKQILVLGLDGAGKTSVLHSLASNRVQHSVAPTQGFHAVCINTEDSQMEFLEIGGSKPFRSYWEMYLSKGLLLIFVVDSADHSRLPEAKKYLHQLIAANPV--LPLVVFANKQDLEAAYHITDIHEALAL 145
BLAST of CK935377 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12 Identity = 36/98 (36.73%), Postives = 57/98 (58.16%), Query Frame = 2 Query: 158 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRNRIVEARDELHRMLN 451 +KE +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VDS D+ R E++ EL +L+ Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLS 115
BLAST of CK935377 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.756e-12 Identity = 44/126 (34.92%), Postives = 65/126 (51.59%), Query Frame = 2 Query: 128 FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRNRIVEARDELHRMLNEDELRDAVLLVFANKQDL 505 F LF K IL +G+D AGKTT++ KLK +PT + +E N+ V D+GG R WR YF + G++F+VD +D R E R+ +L+ + + A ++V NK DL Sbjct: 24 FQNFVKSLFGKPSS-ILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVREAYETVLSLE--KRAPVVVLMNKIDL 146 The following BLAST results are available for this feature:
BLAST of CK935377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935377 ID=CK935377; Name=CK935377; organism=Citrus sinensis; type=EST; length=741bpback to top |