CK935387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935387 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 238.81 bits (608), Expect = 2.391e-62 Identity = 116/225 (51.56%), Postives = 145/225 (64.44%), Query Frame = 1 Query: 85 GSAQNCGSGVVCGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIINEWKPSANDVNAGRLPGYGLTTNIIN 750 G C G CG T + GG + IIS +F+ +L +RND C A+GFYTYDAF+ AA A+P F +G+ KRE+AAF AQT HETTGGW AP G Y+WGYC+ + + + +YYGRGPIQ+T+N NY G+A+G DLLNNPDL+A+D +SFK+A WFWMT Q PKPSCH VI +W PSA+D AGR+PGYG TNIIN Sbjct: 52 GCQSQCSGG--CGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIIN 274
BLAST of CK935387 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 5.326e-62 Identity = 116/225 (51.56%), Postives = 144/225 (64.00%), Query Frame = 1 Query: 88 SAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX---LPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIINEWKPSANDVNAGRLPGYGLTTNIIN 750 SA CG G G+ G + I+SR +F+ +L +RNDA CPA FYTYDAF+ AA AFPGF +G + KRE+AAF AQT HETTGGW AP G YAWGYC+ + A+ +YYGRGPIQL++N NY G+A+G DLL +PDL+A+D +SF +A WFWMT Q PKPSCH V +W PSA+D AGR+PGYG+ TNIIN Sbjct: 61 SAAGCGGG----GPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIIN 281
BLAST of CK935387 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 9.084e-62 Identity = 112/205 (54.63%), Postives = 142/205 (69.27%), Query Frame = 1 Query: 142 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIINEWKPSANDVNAGRLPGYGLTTNIIN 750 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG G + GYC+++Q+ + +YYGRGPIQLT NY R G+ +GV +L+NNPDL+ATDP++SFK+AIWFWMT Q KPSCH VII +W PS D A R+PGYG+ TNIIN Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIIN 207
BLAST of CK935387 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 2.024e-61 Identity = 113/203 (55.67%), Postives = 144/203 (70.94%), Query Frame = 1 Query: 142 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIINEWKPSANDVNAGRLPGYGLTTNIIN 750 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG A G +A GYC++R+ + S +YGRGPIQLT NY G+A+G DL+NNPDL+ATD +SFK+AIWFWMTAQ KPSCH+VI +W PSA D +A R PGYG+ TNIIN Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADG-PFAGGYCFVREGNQMGSG-------------FYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIIN 201
BLAST of CK935387 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.509e-61 Identity = 107/198 (54.04%), Postives = 136/198 (68.69%), Query Frame = 1 Query: 160 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIINEWKPSANDVNAGRLPGYGLTTNIIN 750 + +IS+ +FE +L +RND C A+GFYTY+AFI A + F FG +G+ R +EIAAF AQT HETTGGW AP G Y+WGYCY R+ PG+ Y+GRGPIQ+++N NY G A+GV+LLNNPDL+A D V+SFK+A+WFWMTAQ PKPS H+VI W PS D GR+PG+G+ TNIIN Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQWPCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIIN 202
BLAST of CK935387 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.450e-59 Identity = 113/203 (55.67%), Postives = 141/203 (69.46%), Query Frame = 1 Query: 142 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIINEWKPSANDVNAGRLPGYGLTTNIIN 750 GT +G I++ ++F+ +L RNDARC A FYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG T +P G YA GYC++R+ + + YYGRGPIQLT NY G+A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPSCH+VI W PSA D +A R+PGYG+ TNIIN Sbjct: 20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGNG-------------YYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIIN 208
BLAST of CK935387 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.450e-59 Identity = 112/218 (51.38%), Postives = 146/218 (66.97%), Query Frame = 1 Query: 100 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIINEWKPSANDVNAGRLPGYGLTTNIIN 750 C + + +G G +G +I++ +F +LP R++++CPARGFYTYDAFI AA +FP FG SG + +RE+AAFF QT HETTGG T ++ WGYC+ +++ A+S YYGRGPIQLT NY G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ KPSCH+VI+ W PSA D AGR+PGYG+ TNIIN Sbjct: 14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSPP------------YYGRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIIN 216
BLAST of CK935387 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.666e-58 Identity = 108/197 (54.82%), Postives = 136/197 (69.04%), Query Frame = 1 Query: 160 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIINEWKPSANDVNAGRLPGYGLTTNIIN 750 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FPGFG +G++T R++EIAAFF QT HETTGG A + GYC++RQ + +YYGRGPIQLT NY + G A+G +L+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA D A R+PGYG+ TNIIN Sbjct: 27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD--------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIIN 207
BLAST of CK935387 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.024e-57 Identity = 108/197 (54.82%), Postives = 134/197 (68.02%), Query Frame = 1 Query: 160 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIINEWKPSANDVNAGRLPGYGLTTNIIN 750 +G I++ ++F ++L RND RCPA GFYTYDAFI AA +FPGFG SG++T R++EIAAFF QT HETTGG A + GYC++RQ + +YYGRGPIQLT NY + G A+ DL+NNPDL+ATD +SFK+AIWFWMT Q KPS H+VII W PSA D +A R PG G+ TNIIN Sbjct: 27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD--------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIIN 207
BLAST of CK935387 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.405e-54 Identity = 97/207 (46.86%), Postives = 133/207 (64.25%), Query Frame = 1 Query: 136 GHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIINEWKPSANDVNAGRLPGYGLTTNIIN 750 G+ + I+S +++ L +++DA CPARGFYTY +F+ AA FP F +G RKRE+AAF AQ HETTGGW AP G YAWG CY +++P SS D Y+GRGPIQ++WN NY G+ALG D L NP+++A ++F++A+WFWMT + KPSCH+V++ E++P DV A R G+GL TNI+N Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVN 247 The following BLAST results are available for this feature:
BLAST of CK935387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935387 ID=CK935387; Name=CK935387; organism=Citrus sinensis; type=EST; length=750bpback to top |