CK935392

Overview
NameCK935392
Unique NameCK935392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.081e-65
Identity = 126/176 (71.59%), Postives = 134/176 (76.14%), Query Frame = 2
Query:  179 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 706
            KDYTDPPP PLFD  EL  WSFYRALIAEFIA            IGYK Q+    + D C GVG LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKVS++RAVMY+VAQCLG I GVG+VK   K  Y   GGGAN +A GYSTG  L AEIIGTFVLVYTVFSATDP
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQS----SADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDP 186          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 6.055e-65
Identity = 125/191 (65.45%), Postives = 143/191 (74.87%), Query Frame = 2
Query:  134 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 706
            ++++  V +HG    KDY DPPP P FD  EL  WSF+RA IAEFIA            IGYK +TDP      CA VG+LGIAW+FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA++YM+AQC GAI GVGLVKAF K  Y ++GGGAN +A GY+ G    AE+IGTFVLVYTVFSATDP
Sbjct:    6 ISEEGQVHQHG----KDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDP------CASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDP 186          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.445e-58
Identity = 121/192 (63.02%), Postives = 135/192 (70.31%), Query Frame = 2
Query:  128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 703
            FP  +  G +   +   KDY +PPP PLF+  EL+ WSFYRA IAEFIA            +G K     A N+  CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAI G G+VK FQ + Y   GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD
Sbjct:   15 FPERQPIGTSAQST--DKDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATD 198          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.887e-58
Identity = 114/184 (61.96%), Postives = 130/184 (70.65%), Query Frame = 2
Query:  158 EHGSYSAK-DYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 706
            E G+ +AK  Y DPPP PL D  EL KWS YRALIAEF+A            IGYK+Q      VD C GVG LG+AW+FG  IFVLVYCT G+SGGHINPAVT GLF  RK+SLVR V+Y+VAQCLGAI+G G+VK   K  Y   GGGAN ++DGYS    L AEI+GTF+LVYTVFSATDP
Sbjct:   13 EGGAAAAKAPYWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQR---ATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDP 193          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.218e-58
Identity = 117/185 (63.24%), Postives = 132/185 (71.35%), Query Frame = 2
Query:  149 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 703
            G A  G+   KDY +PPP PLF+A ELT WSFYRA IAEF+A            +G       +K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAI G G+VK FQ+  Y   GGGAN +  GY+ G GL AEI+GTFVLVYTVFSATD
Sbjct:   22 GTAAQGT-EEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFLYISILTVMGV------SKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATD 199          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 3.218e-58
Identity = 118/192 (61.46%), Postives = 132/192 (68.75%), Query Frame = 2
Query:  128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 703
            F   +  G A  GS   KDY +PPP PLF+  EL  WSFYRA IAEF+A            +G  + T        CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAI G G+VK FQK  Y   GGGAN +A GY+ G GL AEI+GTF+LVYTVFSATD
Sbjct:   15 FSERQPIGTAAQGS-DDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVNNSTSK------CATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATD 199          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.203e-58
Identity = 119/192 (61.98%), Postives = 134/192 (69.79%), Query Frame = 2
Query:  128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 703
            FP  +  G +   + S KDY +PPP PLF+  EL  WSF+RA IAEFIA            +G K      ++ + CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD
Sbjct:   15 FPERQPIGTS---AQSDKDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATD 197          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.203e-58
Identity = 114/185 (61.62%), Postives = 131/185 (70.81%), Query Frame = 2
Query:  149 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 703
            G A  G+   KDY +PPP PLF+  EL  WSFYRA IAEF+A            +G       +K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ+  Y   GGGAN +A GY+ G GL AEI+GTF+LVYTVFSATD
Sbjct:   22 GTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGV------SKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATD 200          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.489e-58
Identity = 113/192 (58.85%), Postives = 133/192 (69.27%), Query Frame = 2
Query:  128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 703
            F   +  G A  G+   KDY +PPP PLF+  EL  WSFYRA IAEF+A            +G       +K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+ G G+VK FQ+  Y   GGGAN +A GY+ G GL AEI+GTF+LVYTVFSATD
Sbjct:   15 FSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGV------SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATD 200          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 9.363e-58
Identity = 120/192 (62.50%), Postives = 135/192 (70.31%), Query Frame = 2
Query:  128 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 703
            FP  +  G +   + + KDY +PPP P F+  EL+ WSFYRA IAEFIA            +G K     A N+  CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAI G G+VK FQ + Y   GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD
Sbjct:   15 FPERQPIGTS---AQTDKDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATD 197          
The following BLAST results are available for this feature:
BLAST of CK935392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
PIP26_ORYSJ2.081e-6571.59Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP1_ATRCA6.055e-6565.45Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP14_ARATH1.445e-5863.02Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP27_ORYSJ1.887e-5861.96Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP15_MAIZE3.218e-5863.24Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP12_ORYSJ3.218e-5861.46Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_ARATH4.203e-5861.98Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP11_ORYSJ4.203e-5861.62Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_MAIZE5.489e-5858.85Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_ARATH9.363e-5862.50Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_C08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935392 ID=CK935392; Name=CK935392; organism=Citrus sinensis; type=EST; length=706bp
GGGATACCAAAANNNAGCTACAAAAAGAAAAAGNNNAAGAAAAAGGAAAN
NNNNNNTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCT
GTTTCTCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGG
GGTGGCAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGC
CGGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGA
GCCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGT
CTTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCG
ACGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGC
ATGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACAT
TAACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGG
TCCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGT
GTTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGG
TGGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCG
CCGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACT
GATCCC
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