CK935392

Overview
NameCK935392
Unique NameCK935392
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 55/154 (35.71%), Postives = 72/154 (46.75%), Query Frame = 2
Query:  248 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDP 706
            +A +AEFIA            I Y   T    N       G++ IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  V Y VAQ LGA      V      + T           G S   G+  E++ TF LVYTV+ +A DP
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGA-----TVACLLLGFVTHGKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADP 163          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.379e-13
Identity = 53/160 (33.12%), Postives = 75/160 (46.88%), Query Frame = 2
Query:  224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 703
            EL   SF+RA+ AEF A            +G   +  P         + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ Y+VAQ LGA++G  ++ +       R     N L  G S G     EI  T   V  +F+  D
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYD 150          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 56/162 (34.57%), Postives = 78/162 (48.15%), Query Frame = 2
Query:  239 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGV----GLAAEIIGTFVLVYTVF-SATDP 706
            S  +A ++EFIA            + +   T      DG     G++ IA A    +FV V   A ISGGH+NPAVT GL +   ++L+    Y +AQCLG+I     V      + T    G +    G S G+    G+  EI+ TF LVYTV+ +A DP
Sbjct:   16 SSLKAYLSEFIATLLFVFAGVGSAVAFAKLTS-----DGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSI-----VACLLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADP 164          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 47/119 (39.50%), Postives = 64/119 (53.78%), Query Frame = 2
Query:  362 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGTFVLVYTVFSAT 700
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T   +  +  +T
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGST 151          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 47/119 (39.50%), Postives = 64/119 (53.78%), Query Frame = 2
Query:  362 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGTFVLVYTVFSAT 700
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T   +  +  +T
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGST 151          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13
Identity = 47/119 (39.50%), Postives = 64/119 (53.78%), Query Frame = 2
Query:  362 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGL--VKAFQKSYYTRYG---GGANELA-DGYSTGVGLAAEIIGTFVLVYTVFSAT 700
            G+G LG+A AFG  +  + Y   GISGGH NPAV+ GL +A ++     + Y VAQ LGAI+   +  V A  K  ++  G    G  EL+  GYS   GL  EII T   +  +  +T
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGST 151          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13
Identity = 53/160 (33.12%), Postives = 73/160 (45.62%), Query Frame = 2
Query:  224 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 703
            EL   SF+RA+ AEF A            +G   +  P         + +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA  YM AQ LGA++G  ++ +       R     N L  G S G     EI  T   V  +F+  D
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTPGP-------LHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYD 150          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 62/197 (31.47%), Postives = 82/197 (41.62%), Query Frame = 2
Query:  134 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAA------EIIGTFVLVYTVFSATDP 706
            M KD+    HG  +    T   P+    A E+    F+R++I+E +A             G          V       +L  A A G  +  L  C   ISG HINPAVT  L + R +S +RA MY+ AQC G I+G  L+      Y     G    L    S    LAA      E I TF++V   F +TDP
Sbjct:   29 MRKDSHGGGHGVNNRLSSTLQAPKRSMQA-EIRTLEFWRSIISECLASFMYVFIVCGAAAGV--------GVGASVSSVLLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALL------YGVTVPGYQGNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTDP 210          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 53/154 (34.42%), Postives = 73/154 (47.40%), Query Frame = 2
Query:  248 RALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF-SATDP 706
            +A +AEFIA            I Y   T  A         G++ +A A    +FV V   A ISGGH+NPAVT GL +   ++++    Y +AQ LG+     L+K           G    +A G +   G+  EII TF LVYTV+ +A DP
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADA----ALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHG----VAAGLNGFQGVVMEIIITFALVYTVYATAADP 164          
BLAST of CK935392 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 36/109 (33.03%), Postives = 59/109 (54.13%), Query Frame = 2
Query:  380 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 706
            IA+ FG  +  L      ISG HINPAVT G  +  ++S++++V+Y+  QC+GAI+G  ++K       +    G +  +   + G  +  E + TF+LV  V   +DP
Sbjct:   57 IAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDP 165          
The following BLAST results are available for this feature:
BLAST of CK935392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
TIP21_MAIZE5.379e-1335.71Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
MIP_SHEEP5.379e-1333.13Lens fiber major intrinsic protein OS=Ovis aries G... [more]
TIP23_ARATH7.025e-1334.57Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
AQPZ_BRUME7.025e-1339.50Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQPZ_BRUAB7.025e-1339.50Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA27.025e-1339.50Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
MIP_CANFA9.175e-1333.13Lens fiber major intrinsic protein OS=Canis famili... [more]
BIB_DROME1.565e-1231.47Neurogenic protein big brain OS=Drosophila melanog... [more]
TIP2_TOBAC2.669e-1234.42Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
AQP_HAEIX2.669e-1233.03Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_C08 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935392 ID=CK935392; Name=CK935392; organism=Citrus sinensis; type=EST; length=706bp
GGGATACCAAAANNNAGCTACAAAAAGAAAAAGNNNAAGAAAAAGGAAAN
NNNNNNTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCT
GTTTCTCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGG
GGTGGCAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGC
CGGAGCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGA
GCCTTGATAGCTGAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGT
CTTGACTGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCG
ACGGCTGTGCCGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGC
ATGATCTTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACAT
TAACCCGGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGG
TCCGTGCTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGT
GTTGGGTTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGG
TGGGGCCAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCG
CCGAGATCATCGGCACCTTTGTCTTGGTTTACACTGTCTTCTCGGCCACT
GATCCC
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