CK935398

Overview
NameCK935398
Unique NameCK935398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13444 contig Csv1_Contig13444:266..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_NEUCR (CTP synthase OS=Neurospora crassa GN=ura-7 PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.218e-51
Identity = 98/167 (58.68%), Postives = 124/167 (74.25%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKD--CKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTL 499
            E + P+LG+CLGMQVAVIE AR++  L+DA S EFD N ++  +IFMPEGSK  +GGTMRLG+R T+FQ      K   LYG  T I+ERHRHRYEVNPD I +LE +GL F GKD++ +RME+VE+ +HPY++GVQ+HPEY SR   PS  FLG +AAA G LD +
Sbjct:  382 EQKTPFLGVCLGMQVAVIEAARNLCELKDATSEEFDANAEHRVIIFMPEGSKEKLGGTMRLGTRSTHFQPGSEFSKLRALYGEATTIEERHRHRYEVNPDYIEKLEQSGLIFIGKDDSGERMEVVEIKDHPYYVGVQYHPEYTSRVLDPSRPFLGFVAAAIGCLDQI 548          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG1_HUMAN (CTP synthase 1 OS=Homo sapiens GN=CTPS PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 4.203e-51
Identity = 94/163 (57.67%), Postives = 122/163 (74.85%), Query Frame = 2
Query:   17 PYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            P+LG+CLGMQ+AV+EF+R+VL  +DANSTEFDP T +P V+ MPE +   MGGTMRLG RRT FQ K+    KLYG+  +++ERHRHR+EVNP     LE  GL F G+D   +RMEIVEL +HP+F+GVQ+HPE+ SRP KPSP + GL+ A+ G+L   +Q
Sbjct:  394 PFLGVCLGMQLAVVEFSRNVLGWQDANSTEFDPTTSHPVVVDMPEHNPGQMGGTMRLGKRRTLFQTKNSVMRKLYGDADYLEERHRHRFEVNPVWKKCLEEQGLKFVGQDVEGERMEIVELEDHPFFVGVQYHPEFLSRPIKPSPPYFGLLLASVGRLSHYLQ 556          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SCHPO (CTP synthase OS=Schizosaccharomyces pombe GN=ura7 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.495e-48
Identity = 97/169 (57.40%), Postives = 118/169 (69.82%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKD--CKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            E+  PYLGICLGMQVAVIEFARSV  +  A S EFD   +N  V++MPE  K  +GGTMRLG R T+FQ      K  KL+     + ERHRHRYE+NP  ++RLE  G+SF GKDE  +RMEI+E  +HPYF+GVQ+HPEY S+P KPSP   GL+AA+ G LD  IQ
Sbjct:  394 ENNTPYLGICLGMQVAVIEFARSVCGIEGAFSEEFDKECENNVVVYMPEIDKDKLGGTMRLGLRPTFFQPNSEWSKLRKLHKMVDEVLERHRHRYEINPAFVSRLEQGGISFIGKDERGERMEIIEKRDHPYFVGVQYHPEYLSKPLKPSPPIFGLVAASAGLLDEFIQ 562          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_GIBZE (CTP synthase OS=Gibberella zeae GN=URA7 PE=3 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 4.349e-48
Identity = 97/186 (52.15%), Postives = 129/186 (69.35%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQ--VKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGSQGNLSAKLGNGIA 556
            E ++PYLGICLGMQ AVIE+AR+V+ L+ A S EF    ++  VIFMPEGSK  MGGTMRLGSR ++F+   +  K   LYG    ++ERHRHRYEVNPD I  LE AGLS T  D+   R+E +EL +HP+F+G+Q HPEYKS+   P+P  LGL+AA+ G LD +I+ +  + + S    NG++
Sbjct:  394 ERKLPYLGICLGMQTAVIEYARNVMGLKGATSEEFSATAEHRVVIFMPEGSKEQMGGTMRLGSRTSHFKPGTEWSKLRGLYGGVDVVEERHRHRYEVNPDYIEDLEKAGLSLTSMDDQGVRVETIELKDHPFFVGLQAHPEYKSKTLAPAPSLLGLVAASSGCLDEIIEAAHKKQSSS----NGVS 575          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_CANGA (CTP synthase OS=Candida glabrata GN=URA7 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.690e-48
Identity = 93/172 (54.07%), Postives = 123/172 (71.51%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDP--NTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQ--VKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQG 508
            E+ IP+LG+CLG+Q+A IEFAR+VL +++ NS EF P  +  N  V+FMPE  K  MGG+MRLG R TYFQ   + C   KLYG+   ++ERHRHRYE+NP+ I RLE  GL F G+DET++R EI E+ +HP+F+  Q+HPEY S+   PS  FLGL+AA+ G LD +I G
Sbjct:  395 ENHIPFLGVCLGLQIATIEFARNVLGVKEGNSAEFFPELDESNQVVVFMPEIDKETMGGSMRLGLRPTYFQQGTEWCAIKKLYGSAESVEERHRHRYEINPNFIERLEEHGLMFVGRDETNKRCEIFEMKDHPFFVATQYHPEYTSKVLDPSKPFLGLVAASSGILDDVIAG 566          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_DROME (CTP synthase OS=Drosophila melanogaster GN=CG6854 PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 4.809e-47
Identity = 95/167 (56.89%), Postives = 112/167 (67.07%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ 505
            E++ P LGICLG+Q AVIEFAR+ L L+DAN+TE DPNT N  VI MPE     +GGTMRLG R T F        +LYGN   + ERHRHRYEVNP  +  LE  G+ F G D    RMEI+EL  HPYF+  Q+HPEY SRP KPSP FLGLI A+  +L+  IQ
Sbjct:  390 ENQKPLLGICLGLQAAVIEFARNKLGLKDANTTEIDPNTANALVIDMPEHHTGQLGGTMRLGKRITVFSDGPSVIRQLYGNPKSVQERHRHRYEVNPKYVHLLEEQGMRFVGTDVDKTRMEIIELSGHPYFVATQYHPEYLSRPLKPSPPFLGLILASVDRLNQYIQ 556          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: URA7_YEAST (CTP synthase 1 OS=Saccharomyces cerevisiae GN=URA7 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 6.281e-47
Identity = 94/172 (54.65%), Postives = 123/172 (71.51%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNT--KNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKD--CKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQG 508
            E+ IP+LG+CLG+Q+A IEF RSVL  +D++S EF P+   KN  V+FMPE  K  MGG+MRLG R T+FQ +    +  KLYG+ + + ERHRHRYE+NP M+  LEN GL F GKD+T +R EI+EL NHPY+I  Q+HPEY S+   PS  FLGL+AA+ G L  +I+G
Sbjct:  395 ENHIPFLGVCLGLQIATIEFTRSVLGRKDSHSAEFYPDIDEKNHVVVFMPEIDKETMGGSMRLGLRPTFFQNETEWSQIKKLYGDVSEVHERHRHRYEINPKMVDELENNGLIFVGKDDTGKRCEILELKNHPYYIATQYHPEYTSKVLDPSKPFLGLVAASAGILQDVIEG 566          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_DROPS (CTP synthase OS=Drosophila pseudoobscura pseudoobscura GN=GA23623 PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 2.387e-46
Identity = 104/213 (48.83%), Postives = 127/213 (59.62%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSA--KLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQ----------GSGSQGNLSAKLGNGIAMEKVYQKGTTKPAKVLS 607
            E++ P LGICLG+Q AVIEFAR+ L L+DAN+TE DP T N  VI MPE     +GGTMRLG R T F  + C S   +LYGN   I+ERHRHRYEVNP  + +LE  G+ F   D    RMEI+EL +HPYF+  Q+HPEY SRP KPSP FLGLI A+  +L   IQ             S       +G    M+ +   GTT P   +S
Sbjct:  390 ENQKPMLGICLGLQAAVIEFARNKLGLKDANTTEIDPQTGNALVIDMPEHHTGQLGGTMRLGKRTTVFS-EGCTSIIRQLYGNPKSIEERHRHRYEVNPKYVPQLEEHGMRFVATDVDKTRMEIIELRDHPYFVATQYHPEYLSRPLKPSPPFLGLILASVDRLPQYIQRGCRLSPRQLSDASSDEEETYVGATKLMKSLQITGTTTPTNGIS 601          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ASHGO (CTP synthase OS=Ashbya gossypii GN=URA7 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.020e-45
Identity = 93/177 (52.54%), Postives = 120/177 (67.80%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNP--CVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSA--KLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSGSQG 523
            E++IPYLG+CLG+QVA IEFAR VL + DA S+EF P        V++MPE  K +MGGTMRLG R T FQ     S   KLYG+ + ++ERHRHRYE+NP M+ +LE  GL F G+DET  R EI+EL +HPY++  Q+HPEY S+   PS  FLGL+AAA   L +L+    + G
Sbjct:  395 ENKIPYLGVCLGLQVATIEFARHVLGIADATSSEFYPEVAEDKQVVVYMPEIDKQNMGGTMRLGLRPTIFQEDTDWSIIRKLYGSASSVEERHRHRYEINPKMVQKLEEHGLKFVGRDETGTRCEILELVDHPYYVATQYHPEYMSKVLDPSQPFLGLVAAAANILPSLLAAERAVG 571          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_DICDI (CTP synthase OS=Dictyostelium discoideum GN=ctps PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.917e-44
Identity = 90/162 (55.56%), Postives = 115/162 (70.99%), Query Frame = 2
Query:   17 PYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNP-CVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTF---IDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQL 490
            P+LGICLG+Q+AVIE+AR+V+   +ANS EF  +      V+FMPE SKTHMGGTMRLGSR T F   D K +KLY        ++ERHRHRYEVNP+++  +   GL F GKD T  RMEIVEL +H Y++  QFHPE+KSRP +PSP F+GL+ A+  +L
Sbjct:  405 PFLGICLGLQIAVIEYARNVMGWENANSEEFSASGSGKNVVVFMPEVSKTHMGGTMRLGSRDTIFTDVDNKISKLYNVDKVGQAVEERHRHRYEVNPEVVDEIHAKGLHFVGKDTTGVRMEIVELKDHDYYVACQFHPEFKSRPQRPSPPFIGLLNASLERL 566          
The following BLAST results are available for this feature:
BLAST of CK935398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_NEUCR3.218e-5158.68CTP synthase OS=Neurospora crassa GN=ura-7 PE=3 SV... [more]
PYRG1_HUMAN4.203e-5157.67CTP synthase 1 OS=Homo sapiens GN=CTPS PE=1 SV=2[more]
PYRG_SCHPO1.495e-4857.40CTP synthase OS=Schizosaccharomyces pombe GN=ura7 ... [more]
PYRG_GIBZE4.349e-4852.15CTP synthase OS=Gibberella zeae GN=URA7 PE=3 SV=2[more]
PYRG_CANGA9.690e-4854.07CTP synthase OS=Candida glabrata GN=URA7 PE=3 SV=1[more]
PYRG_DROME4.809e-4756.89CTP synthase OS=Drosophila melanogaster GN=CG6854 ... [more]
URA7_YEAST6.281e-4754.65CTP synthase 1 OS=Saccharomyces cerevisiae GN=URA7... [more]
PYRG_DROPS2.387e-4648.83CTP synthase OS=Drosophila pseudoobscura pseudoobs... [more]
PYRG_ASHGO2.020e-4552.54CTP synthase OS=Ashbya gossypii GN=URA7 PE=3 SV=1[more]
PYRG_DICDI2.917e-4455.56CTP synthase OS=Dictyostelium discoideum GN=ctps P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935398 ID=CK935398; Name=CK935398; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGCACAGAATTCCTTACCTTGGCATTTGTCTTGGAATGCAAGTTG
CTGTCATCGAGTTTGCGCGATCTGTTCTTAATCTGAGAGATGCTAACAGC
ACAGAATTTGATCCTAACACCAAAAATCCTTGTGTTATATTTATGCCGGA
GGGCTCAAAAACTCATATGGGAGGCACTATGCGTCTTGGGTCAAGAAGGA
CATACTTCCAAGTCAAGGACTGCAAATCTGCAAAATTATATGGAAACAGA
ACTTTCATTGATGAGAGACATCGTCATAGATACGAGGTGAATCCTGATAT
GATAGCACGCTTGGAAAATGCCGGTCTCTCTTTCACTGGCAAGGATGAAA
CTAGCCAACGCATGGAGATTGTTGAGCTGCCTAACCATCCCTACTTCATT
GGTGTTCAATTCCATCCCGAATACAAATCTAGGCCTGGAAAACCGTCTCC
TTTGTTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTAGATACTCTCA
TACAAGGATCTGGGAGCCAAGGAAATCTCTCTGCTAAGCTTGGCAACGGC
ATTGCAATGGAGAAGGTATACCAAAAGGGAACTACGAAACCTGCGAAAGT
GTTATCAGATGGTTTATACAGCTATTGCAATGGTGTGCAAGTTTGAAGGC
ATTTTCTGCCATTGGTTTTAGGATCTATTAGTTATCAAGCAGTACTGATT
CTGCCAAAGAGTTTTAGTAGCAATCTTAGGATTTCTCTGTACAGTCATTT
GAGTATGGATAGGTGTTTCAGCTTGCTTTCAAAAGGGACTGCAGACAGAC
CAAACAGAGCTGAATCCCGATCTTTTAAATGGGATAGCCTGTTGTGTTTC
ATAGTTGTAATGTAACCTTTTCTTGACCTATGGCT
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