CK935398

Overview
NameCK935398
Unique NameCK935398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13444 contig Csv1_Contig13444:266..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_METKA (CTP synthase OS=Methanopyrus kandleri GN=pyrG PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.226e-43
Identity = 90/163 (55.21%), Postives = 115/163 (70.55%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE--GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQ 487
            E+ +P+LGICLG Q+ V+E+ARSVL L DA+STEF+P+T +P V  +PE  G K   GGTMRLG+     + +     +LY +R  + ERHRHRYEVNP  +  LE+ GL F+G      RME +ELP+HPYF+G QFHPE+KSRPG PSP F+GLI AA GQ
Sbjct:  373 ENDVPFLGICLGFQLVVVEYARSVLGLEDAHSTEFNPDTDHPVVDLLPEQRGVK-RKGGTMRLGAEPVVLE-EGSLLRRLYDDREIVLERHRHRYEVNPSYVRELEDHGLRFSGHSPDG-RMEALELPDHPYFVGTQFHPEFKSRPGDPSPPFVGLIKAAAGQ 532          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: URA8_YEAST (CTP synthase 2 OS=Saccharomyces cerevisiae GN=URA8 PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 7.186e-43
Identity = 93/181 (51.38%), Postives = 120/181 (66.30%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNT----KNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKS--AKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSG-SQGN 526
            E  +P+LG+CLG+QVA IEFAR+V+   +++STEF   T    ++  VI+MPE  K HMGGTMRLG R T FQ     S   KLYG    + ERHRHRYE+NP ++  +E+ G  F GKDET QR EI EL  HPY++G Q+HPEY S+  +PS  F GL+AAA G L  +I+    S+GN
Sbjct:  395 ESGVPFLGVCLGLQVAAIEFARNVIGRPNSSSTEFLDETLLAPEDQVVIYMPEIDKEHMGGTMRLGLRPTIFQPNSEWSNIRKLYGEVNEVHERHRHRYEINPKIVNDMESRGFIFVGKDETGQRCEIFELKGHPYYVGTQYHPEYTSKVLEPSRPFWGLVAAASGTLGEVIKDINLSEGN 575          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: URA8_YEAS7 (CTP synthase 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=URA8 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.186e-43
Identity = 93/181 (51.38%), Postives = 120/181 (66.30%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNT----KNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKS--AKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLIQGSG-SQGN 526
            E  +P+LG+CLG+QVA IEFAR+V+   +++STEF   T    ++  VI+MPE  K HMGGTMRLG R T FQ     S   KLYG    + ERHRHRYE+NP ++  +E+ G  F GKDET QR EI EL  HPY++G Q+HPEY S+  +PS  F GL+AAA G L  +I+    S+GN
Sbjct:  395 ESGVPFLGVCLGLQVAAIEFARNVIGRPNSSSTEFLDETLLAPEDQVVIYMPEIDKEHMGGTMRLGLRPTIFQPNSEWSNIRKLYGEVNEVHERHRHRYEINPKIVNDMESRGFIFVGKDETGQRCEIFELKGHPYYVGTQYHPEYTSKVLEPSRPFWGLVAAASGTLGDVIKDINLSEGN 575          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_METBF (CTP synthase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=pyrG PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.943e-41
Identity = 87/160 (54.37%), Postives = 114/160 (71.25%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAAC 481
            E+ IP+LGICLGMQ+AVIEFAR+V  L+ ANSTEFD ++  P +  +PE +    MGGTMRLG        +   +AK+YG   +I ERHRHRYEVNP+ + RLE+ G+ F+GK++   RMEI E+P   +F G QFHPE++SRPG+PSP F GL+AA C
Sbjct:  370 ENDIPFLGICLGMQLAVIEFARNVAKLKGANSTEFDEDSPYPVIDLLPEQTGVAEMGGTMRLGDYEAIL-TEGSIAAKIYGT-NYIVERHRHRYEVNPEFVDRLESYGIVFSGKNK--NRMEIAEIPGKRFFFGSQFHPEFRSRPGRPSPPFNGLVAAMC 525          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_METMA (CTP synthase OS=Methanosarcina mazei GN=pyrG PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.150e-41
Identity = 88/160 (55.00%), Postives = 113/160 (70.62%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAAC 481
            E+ IP+LGICLGMQ+AVIEFAR+V NL +ANSTEFD +T  P +  +PE +    MGGTMRLG      + +   + KLYG   +I ERHRHRYEVNP+ + RLE+ G+ F+GK++   RMEI E+P   +F   QFHPE+KSRPG+PSP F GL+ A C
Sbjct:  370 ENDIPFLGICLGMQLAVIEFARNVANLENANSTEFDEDTPYPVIDILPEQTGVADMGGTMRLGDYDAILK-EGSFATKLYGT-NYIVERHRHRYEVNPEFVDRLESFGIVFSGKNK--NRMEIAEIPGKRFFFASQFHPEFKSRPGRPSPPFKGLVRAMC 525          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_METAC (CTP synthase OS=Methanosarcina acetivorans GN=pyrG PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.726e-41
Identity = 89/161 (55.28%), Postives = 116/161 (72.05%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-KTHMGGTMRLGSRRTYFQVKDCKSA-KLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAAC 481
            E+ +P+LGICLGMQ+AVIEFAR+V+NL +ANSTEFD +T  P +  +PE +    MGGTMRLG       +KD   A KLYG   +I ERHRHRYEVNP+ + RLE+ G+ F+GK++   RMEI E+P+  +F   QFHPE++SRPG+PSP F GL+ A C
Sbjct:  370 ENDVPFLGICLGMQLAVIEFARNVVNLENANSTEFDEDTPYPVIDILPEQTGVADMGGTMRLGDYDAI--LKDGSLATKLYGT-NYIVERHRHRYEVNPEFVDRLESFGIVFSGKNK--NRMEIAEIPDKRFFFASQFHPEFRSRPGRPSPPFKGLVRAMC 525          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_THEGJ (CTP synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pyrG PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.694e-40
Identity = 86/160 (53.75%), Postives = 113/160 (70.62%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT-HMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTG-KDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IP+LGIC G Q+ V+EFAR+VL L+ A+STE DP T  P V  MPE      +GGTMRLG+   + +  +  + +LYG R  + ERHRHR+EVNPD I +LE+AGL F+G   +  +RMEI+ELP+H YFI  QFHPE+KSRP  P+P+F GL+ AA
Sbjct:  369 ENDIPFLGICFGFQLTVVEFARNVLGLKGAHSTEIDPQTPYPVVDLMPEQRDLDRLGGTMRLGAYPVHIK-PNTLAKRLYG-REIVYERHRHRWEVNPDYIEKLESAGLVFSGIAGDDERRMEILELPDHSYFIATQFHPEFKSRPMNPAPVFRGLVRAA 526          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_PYRKO (CTP synthase OS=Pyrococcus kodakaraensis GN=pyrG PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.164e-39
Identity = 84/160 (52.50%), Postives = 110/160 (68.75%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT-HMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTG-KDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IP+LGIC G Q+ V+EFAR+VL L  A+STE DP T  P V  MPE      +GGTMRLG+   + +  +  + +LYG R  + ERHRHR+EVNPD + + E AGL F+G   +  +RMEI+ELP H YFI  QFHPE+KSRP +P+P+F GL+ AA
Sbjct:  369 ENNIPFLGICFGFQLTVVEFARNVLGLEGAHSTEIDPQTPYPVVDLMPEQRDLDRLGGTMRLGAYPVHIK-PNTLARRLYG-REIVYERHRHRWEVNPDYVEKFEEAGLVFSGIAGDDERRMEILELPGHSYFIATQFHPEFKSRPMRPAPVFRGLVEAA 526          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_PYRCJ (CTP synthase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=pyrG PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.164e-39
Identity = 86/160 (53.75%), Postives = 109/160 (68.12%), Query Frame = 2
Query:   11 RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH-MGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQ 487
            +IP+LGIC GMQ+AV+EFAR+VL LRDANSTE DP T +P V   PE      +GG+M LG+R     V    +A LY   +   ERHRHR+EVN   + +L+ AGL  +G     +R+EI+ELP HPYFI  QFHPE+KSRP +P PLFLGL++AA  Q
Sbjct:  371 KIPFLGICFGMQLAVVEFARNVLGLRDANSTELDPQTPHPVVHLAPEQESVDVLGGSMILGNREVEI-VPGTLAAALY-KASLTVERHRHRFEVNLAYVPKLQEAGLVVSGWRRDVKRVEIIELPAHPYFIATQFHPEFKSRPTRPRPLFLGLLSAAVEQ 528          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_PHOPR (CTP synthase OS=Photobacterium profundum GN=pyrG PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.164e-39
Identity = 86/173 (49.71%), Postives = 115/173 (66.47%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEG-----------SKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQL 490
            E++IPYLGICLGMQVA+IEFAR+V  L DA+STEF+  TKNP V  + E              +++GGTMRLGS+  + +    K+ +LYGN + I ERHRHRYEVN +++ +LE AGL  +G     + +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA  QL
Sbjct:  370 ENKIPYLGICLGMQVALIEFARNVAGLADAHSTEFNAETKNPVVGLITEWVDSEGKVEERTENSNLGGTMRLGSQLCHLK-NGSKARELYGNAS-IHERHRHRYEVNNNLLPQLEKAGLKISGLSADKKLVEIIEMPNHPWFVAAQFHPEFTSTPRDGHPLFEGFVKAAGQQL 540          
The following BLAST results are available for this feature:
BLAST of CK935398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_METKA3.226e-4355.21CTP synthase OS=Methanopyrus kandleri GN=pyrG PE=3... [more]
URA8_YEAST7.186e-4351.38CTP synthase 2 OS=Saccharomyces cerevisiae GN=URA8... [more]
URA8_YEAS77.186e-4351.38CTP synthase 2 OS=Saccharomyces cerevisiae (strain... [more]
PYRG_METBF3.943e-4154.38CTP synthase OS=Methanosarcina barkeri (strain Fus... [more]
PYRG_METMA5.150e-4155.00CTP synthase OS=Methanosarcina mazei GN=pyrG PE=3 ... [more]
PYRG_METAC6.726e-4155.28CTP synthase OS=Methanosarcina acetivorans GN=pyrG... [more]
PYRG_THEGJ5.694e-4053.75CTP synthase OS=Thermococcus gammatolerans (strain... [more]
PYRG_PYRKO2.164e-3952.50CTP synthase OS=Pyrococcus kodakaraensis GN=pyrG P... [more]
PYRG_PYRCJ2.164e-3953.75CTP synthase OS=Pyrobaculum calidifontis (strain J... [more]
PYRG_PHOPR2.164e-3949.71CTP synthase OS=Photobacterium profundum GN=pyrG P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935398 ID=CK935398; Name=CK935398; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGCACAGAATTCCTTACCTTGGCATTTGTCTTGGAATGCAAGTTG
CTGTCATCGAGTTTGCGCGATCTGTTCTTAATCTGAGAGATGCTAACAGC
ACAGAATTTGATCCTAACACCAAAAATCCTTGTGTTATATTTATGCCGGA
GGGCTCAAAAACTCATATGGGAGGCACTATGCGTCTTGGGTCAAGAAGGA
CATACTTCCAAGTCAAGGACTGCAAATCTGCAAAATTATATGGAAACAGA
ACTTTCATTGATGAGAGACATCGTCATAGATACGAGGTGAATCCTGATAT
GATAGCACGCTTGGAAAATGCCGGTCTCTCTTTCACTGGCAAGGATGAAA
CTAGCCAACGCATGGAGATTGTTGAGCTGCCTAACCATCCCTACTTCATT
GGTGTTCAATTCCATCCCGAATACAAATCTAGGCCTGGAAAACCGTCTCC
TTTGTTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTAGATACTCTCA
TACAAGGATCTGGGAGCCAAGGAAATCTCTCTGCTAAGCTTGGCAACGGC
ATTGCAATGGAGAAGGTATACCAAAAGGGAACTACGAAACCTGCGAAAGT
GTTATCAGATGGTTTATACAGCTATTGCAATGGTGTGCAAGTTTGAAGGC
ATTTTCTGCCATTGGTTTTAGGATCTATTAGTTATCAAGCAGTACTGATT
CTGCCAAAGAGTTTTAGTAGCAATCTTAGGATTTCTCTGTACAGTCATTT
GAGTATGGATAGGTGTTTCAGCTTGCTTTCAAAAGGGACTGCAGACAGAC
CAAACAGAGCTGAATCCCGATCTTTTAAATGGGATAGCCTGTTGTGTTTC
ATAGTTGTAATGTAACCTTTTCTTGACCTATGGCT
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