CK935398

Overview
NameCK935398
Unique NameCK935398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13444 contig Csv1_Contig13444:266..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_PYRAE (CTP synthase OS=Pyrobaculum aerophilum GN=pyrG PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.826e-39
Identity = 85/157 (54.14%), Postives = 107/157 (68.15%), Query Frame = 2
Query:   11 RIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH-MGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            +IP+LGIC GMQ+AV+EFAR+VL L+ ANSTE DP T +P V   PE  +   +GG+M LG+R     V    +A LYG  + I ERHRHRYEVN   + +   AGL  +G     +R+EI+ELP HPYFI  QFHPE+KSRP KP P+FLGL+ AA
Sbjct:  371 KIPFLGICFGMQLAVVEFARNVLGLKGANSTELDPETPHPVVHLAPEQREVDVLGGSMILGNREVEI-VPGTLAASLYGV-SVITERHRHRYEVNLSYLPKFTEAGLVVSGWRRDIKRVEIIELPGHPYFIATQFHPEFKSRPAKPRPVFLGLLKAA 525          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ARCFU (CTP synthase OS=Archaeoglobus fulgidus GN=pyrG PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.691e-39
Identity = 81/159 (50.94%), Postives = 108/159 (67.92%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT-HMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ +P+LGIC G Q+AVIEFAR+V+   +ANSTE D NT +P +  +PE      MGGTMRLG      +     + KLYG+   + ERHRHRYEVNP+ I ++E+ GL F+   +  +RMEI ELP+HP+F   QFHPE+KSRP +PSP F+G + AA
Sbjct:  367 ENGVPFLGICFGFQLAVIEFARNVVGFSEANSTELDENTPHPVIDLLPEQKGIDEMGGTMRLGDIEVTIKPGTI-AHKLYGSEKVV-ERHRHRYEVNPEYIEKIESKGLVFSAYSDGGRRMEIAELPDHPFFFATQFHPEFKSRPYRPSPPFVGFVRAA 523          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_PICTO (CTP synthase OS=Picrophilus torridus GN=pyrG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.124e-38
Identity = 84/159 (52.83%), Postives = 109/159 (68.55%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSK-THMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+RIPYLGICLG QV+VIE +RS+L L+ ANSTEFD NT  P +  +PE S  + +GGTMRLGS++    +KD   AK       I ERHRHRYEVNPD I RLE++G+ F+G D+   RMEI+EL +   +I  Q+H E+KSRP  PS + + L+  A
Sbjct:  361 ENRIPYLGICLGFQVSVIEISRSLLGLKGANSTEFDNNTDYPVIDILPEQSNVSDLGGTMRLGSKKVL--IKDGTIAKNIYKSDIIYERHRHRYEVNPDYIERLEDSGVIFSGTDDEKIRMEILELSDRDNYIATQYHAEFKSRPLNPSKVHMHLVLKA 517          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_NATPD (CTP synthase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=pyrG PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.124e-38
Identity = 81/165 (49.09%), Postives = 112/165 (67.88%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH-MGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDT 496
            E+ +P+LG+CLG Q+AV+E+AR+V  L  A+S E D  T +P +  +PE  +   MGGTMRLG+  T  +     + +LY +     ERHRHRYEVNP+ I  LE+AGL F+G+D+   RMEI+ELP+HP+F G QFHPE++SRPG+ SP F+GL+       DT
Sbjct:  381 ENDVPFLGLCLGFQMAVVEYARNVCGLDGAHSAEIDDETDHPVIDILPEQYEVEDMGGTMRLGAHETDIEAGTL-AHELYADEQ-CTERHRHRYEVNPEYIETLESAGLVFSGQDQN--RMEILELPDHPFFFGTQFHPEFRSRPGRASPPFVGLVETILETTDT 541          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_VIBFM (CTP synthase OS=Vibrio fischeri (strain MJ11) GN=pyrG PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.080e-38
Identity = 81/169 (47.93%), Postives = 113/169 (66.86%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEG-----------SKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+++PYLGICLGMQVA+IE+AR+V N+  A+S+EF  +TK P V  + E             K+ +GGTMRLGS+  +   K  K+ +LYGN T ++ERHRHRYEVN +++ +LE AGL  +G     + +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENKVPYLGICLGMQVALIEYARNVANMEGAHSSEFSKDTKFPVVGLITEWIDSEGNVEERTEKSDLGGTMRLGSQLCHL-AKGSKARELYGNAT-VEERHRHRYEVNNNLLPQLEKAGLKVSGLSADKKLVEIIEIPNHPWFVAAQFHPEFTSTPRDGHPLFEGFVKAA 536          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_VIBF1 (CTP synthase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=pyrG PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.080e-38
Identity = 81/169 (47.93%), Postives = 113/169 (66.86%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEG-----------SKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+++PYLGICLGMQVA+IE+AR+V N+  A+S+EF  +TK P V  + E             K+ +GGTMRLGS+  +   K  K+ +LYGN T ++ERHRHRYEVN +++ +LE AGL  +G     + +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENKVPYLGICLGMQVALIEYARNVANMEGAHSSEFSKDTKFPVVGLITEWIDSEGNVEERTEKSDLGGTMRLGSQLCHL-AKGSKARELYGNAT-VEERHRHRYEVNNNLLPQLEKAGLKVSGLSADKKLVEIIEIPNHPWFVAAQFHPEFTSTPRDGHPLFEGFVKAA 536          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_FIBSS (CTP synthase OS=Fibrobacter succinogenes (strain ATCC 19169 / S85) GN=pyrG PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 5.329e-38
Identity = 89/164 (54.27%), Postives = 104/164 (63.41%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSK-THMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIAR--LENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQ 487
            E+++P LGICLGMQ  VIEFAR VL  +DANSTEFD NT +P +  M E    T  GGTMRLG+       KD  +AKLY +   I ERHRHRYE N +   R  LE AGL   G     + +E+VEL NHPYF   QFHPE+KSRP  P PLF GL+ AA  Q
Sbjct:  381 ENKVPLLGICLGMQCCVIEFARDVLGWKDANSTEFDENTTHPVIDLMDEQKNVTEKGGTMRLGAYPCKL-AKDSNAAKLYKSEK-ISERHRHRYEFNYNSEFRKELEKAGLKIAGTSPDGKLVEMVELKNHPYFEACQFHPEFKSRPTDPHPLFTGLVKAALEQ 542          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_RUBXD (CTP synthase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=pyrG PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.960e-38
Identity = 83/160 (51.88%), Postives = 102/160 (63.75%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACG 484
            E   PYLG+CLGMQ+AVIEFAR+V  L  ANSTEFD  T +P +  MP+     MGGTMRLGS     +     +A++YG    + ERHRHRYEVN      LE AG+ F+G     + +EI EL  HP+FIG QFHPE+KSRP +P PLF G + A  G
Sbjct:  373 ESGTPYLGLCLGMQIAVIEFARNVAGLEMANSTEFDEETPHPVIDIMPDQVGVEMGGTMRLGSYPCRLR-PGTLAARVYGAEV-VHERHRHRYEVNNAYREVLEEAGMVFSGTSPDGRLVEIAELAGHPFFIGSQFHPEFKSRPLRPHPLFRGFVGACLG 530          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SULTO (CTP synthase OS=Sulfolobus tokodaii GN=pyrG PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 9.090e-38
Identity = 79/161 (49.07%), Postives = 112/161 (69.57%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSK-THMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACG 484
            E+ +P+LGIC GMQ+AV+EFAR+VL L  A++TE DPNT +P +  + E  K   +GGTMRLGS++   + +   + ++YGN   + ERHRHRYEVNP+ +  L+  GL  +G  E    +E++EL NH +F+G+Q HPEYKSRP  PSP+F+G + AA G
Sbjct:  373 ENNVPFLGICYGMQLAVVEFARNVLGLEKAHTTEVDPNTPHPVITLLDEQKKVVQIGGTMRLGSQKVIVK-EGTLAYRIYGN-IEVYERHRHRYEVNPEYVDLLQKGGLVISGVSENG-LVEMIELKNHKFFLGLQGHPEYKSRPLAPSPVFIGFLRAAAG 530          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_IDILO (CTP synthase OS=Idiomarina loihiensis GN=pyrG PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 9.090e-38
Identity = 89/169 (52.66%), Postives = 107/169 (63.31%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----GSK------THMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  L  ANSTEFD N  +P V  + E     G K      + +GGTMRLGS+  + + K  K+ K+YG  T I+ERHRHRYEVN   I  LE AGL  TG     Q +EI+E P H +F+ VQFHPE+ S P    PLF G I AA
Sbjct:  370 ENNIPYLGICLGMQVAMIEFARNVAGLTGANSTEFDENCSDPVVGLITEWMDASGQKELRDKHSDLGGTMRLGSQECHLE-KGSKALKMYGKET-IEERHRHRYEVNNHYIEPLEKAGLKITGYSHDKQLVEILENPKHRWFVAVQFHPEFTSTPRDGHPLFKGFIEAA 536          
The following BLAST results are available for this feature:
BLAST of CK935398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_PYRAE2.826e-3954.14CTP synthase OS=Pyrobaculum aerophilum GN=pyrG PE=... [more]
PYRG_ARCFU3.691e-3950.94CTP synthase OS=Archaeoglobus fulgidus GN=pyrG PE=... [more]
PYRG_PICTO3.124e-3852.83CTP synthase OS=Picrophilus torridus GN=pyrG PE=3 ... [more]
PYRG_NATPD3.124e-3849.09CTP synthase OS=Natronomonas pharaonis (strain DSM... [more]
PYRG_VIBFM4.080e-3847.93CTP synthase OS=Vibrio fischeri (strain MJ11) GN=p... [more]
PYRG_VIBF14.080e-3847.93CTP synthase OS=Vibrio fischeri (strain ATCC 70060... [more]
PYRG_FIBSS5.329e-3854.27CTP synthase OS=Fibrobacter succinogenes (strain A... [more]
PYRG_RUBXD6.960e-3851.88CTP synthase OS=Rubrobacter xylanophilus (strain D... [more]
PYRG_SULTO9.090e-3849.07CTP synthase OS=Sulfolobus tokodaii GN=pyrG PE=3 S... [more]
PYRG_IDILO9.090e-3852.66CTP synthase OS=Idiomarina loihiensis GN=pyrG PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935398 ID=CK935398; Name=CK935398; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGCACAGAATTCCTTACCTTGGCATTTGTCTTGGAATGCAAGTTG
CTGTCATCGAGTTTGCGCGATCTGTTCTTAATCTGAGAGATGCTAACAGC
ACAGAATTTGATCCTAACACCAAAAATCCTTGTGTTATATTTATGCCGGA
GGGCTCAAAAACTCATATGGGAGGCACTATGCGTCTTGGGTCAAGAAGGA
CATACTTCCAAGTCAAGGACTGCAAATCTGCAAAATTATATGGAAACAGA
ACTTTCATTGATGAGAGACATCGTCATAGATACGAGGTGAATCCTGATAT
GATAGCACGCTTGGAAAATGCCGGTCTCTCTTTCACTGGCAAGGATGAAA
CTAGCCAACGCATGGAGATTGTTGAGCTGCCTAACCATCCCTACTTCATT
GGTGTTCAATTCCATCCCGAATACAAATCTAGGCCTGGAAAACCGTCTCC
TTTGTTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTAGATACTCTCA
TACAAGGATCTGGGAGCCAAGGAAATCTCTCTGCTAAGCTTGGCAACGGC
ATTGCAATGGAGAAGGTATACCAAAAGGGAACTACGAAACCTGCGAAAGT
GTTATCAGATGGTTTATACAGCTATTGCAATGGTGTGCAAGTTTGAAGGC
ATTTTCTGCCATTGGTTTTAGGATCTATTAGTTATCAAGCAGTACTGATT
CTGCCAAAGAGTTTTAGTAGCAATCTTAGGATTTCTCTGTACAGTCATTT
GAGTATGGATAGGTGTTTCAGCTTGCTTTCAAAAGGGACTGCAGACAGAC
CAAACAGAGCTGAATCCCGATCTTTTAAATGGGATAGCCTGTTGTGTTTC
ATAGTTGTAATGTAACCTTTTCTTGACCTATGGCT
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