CK935398

Overview
NameCK935398
Unique NameCK935398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_BACP2 (CTP synthase OS=Bacillus pumilus (strain SAFR-032) GN=pyrG PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.735e-32
Identity = 71/159 (44.65%), Postives = 99/159 (62.26%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH-MGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+++P+ GICLGMQVA IE+AR+VL L  A+S E DP T  P +  +PE      +GGT+RLG        +D K+   Y N   + ERHRHRYE N +   ++E AG  F+G     + +EI+EL +HP+F+  QFHPE+ SRP +P PLF   + A+
Sbjct:  372 ENKVPFFGICLGMQVASIEYARNVLGLEGAHSAEIDPETAFPIIDLLPEQKDVDDLGGTLRLGLYPCKLN-EDSKAFAAY-NDEVVYERHRHRYEFNNEFRQQMEAAGFVFSGTSPDGRLVEIIELKDHPWFLASQFHPEFVSRPTRPQPLFRDFVGAS 528          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SYNP2 (CTP synthase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=pyrG PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 73/158 (46.20%), Postives = 96/158 (60.76%), Query Frame = 2
Query:    8 HRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT-HMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            ++IP+LG+CLGMQ +VIE+AR+V  L DA+S EF+P  KNP +  +PE      +GGTMRLG         D  + +LYG    I ERHRHRYE N    +     G   +G     + +EI+E  +HP+FI  QFHPE++SRP  P PLF G I AA
Sbjct:  373 NQIPFLGLCLGMQSSVIEWARNVAKLEDAHSAEFNPEAKNPVINLLPEQRDVVDLGGTMRLGLYPCRL-TPDTLTYQLYGQEV-IYERHRHRYEFNNAYRSLFLETGYQVSGTSPDGRLVEIIEYADHPFFIATQFHPEFQSRPNHPHPLFFGFIQAA 528          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_PSYCK (CTP synthase OS=Psychrobacter cryohalolentis (strain K5) GN=pyrG PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 77/169 (45.56%), Postives = 104/169 (61.54%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ +PYLGICLGMQ+AVIE+AR+VL++ DANS+EFD  T  P +  + E              + +GGTMRLG+++    V   K A++YG    I ERHRHRYE+N   I  LE AG++ +G       +E VEL +HP+F+ VQFHPE+ S P    PLF   + AA
Sbjct:  372 ENNVPYLGICLGMQLAVIEYARNVLHI-DANSSEFDRKTAEPIIGLITEWLDERGELQIRSDDSDLGGTMRLGAQQAEL-VAGSKLAQIYGANN-ITERHRHRYEMNNRYIEPLEQAGMTVSGYSAKQHLVESVELADHPWFVAVQFHPEFTSSPRGGHPLFNSFVKAA 537          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_PROM3 (CTP synthase OS=Prochlorococcus marinus (strain MIT 9303) GN=pyrG PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 72/159 (45.28%), Postives = 96/159 (60.38%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT-HMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E R+P+LG+CLGMQ AVIE+AR+   L  A+S E +P+T +P +  +PE      +GGTMRLG         D  + KLYG    + ERHRHRYE N         +G + +G     + +E++EL  HP+F   Q+HPE+ SRPGKP PLF GLI AA
Sbjct:  372 EQRVPFLGLCLGMQCAVIEWARNQAGLTGASSAELEPDTSHPVIHLLPEQQDVVDLGGTMRLGVYPCRI-APDTLAQKLYGEEV-VYERHRHRYEFNNSYRNLFIESGYTISGSSPDGRLVELIELKGHPFFTACQYHPEFLSRPGKPHPLFRGLIEAA 528          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_DINSH (CTP synthase OS=Dinoroseobacter shibae (strain DFL 12) GN=pyrG PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 82/172 (47.67%), Postives = 105/172 (61.05%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKN----PCVIFMPEGSKTH----------MGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            EH+IPYLGICLGMQ+AVIE AR + +L DA S EFD         P V  + E  + +           GGTMRLG+  T   V+  K A++YG+ T I+ERHRHRYEV+     +L+  GL F+G     +  EIVE+ +HP+FIGVQFHPE KS+P  P PLF   + AA
Sbjct:  371 EHKIPYLGICLGMQMAVIESARHLTDLTDAGSEEFDHEAGKRRFTPVVYHLKEWVQGNHKVERKVDDDKGGTMRLGAY-TAKLVEGSKVAQIYGSTT-IEERHRHRYEVDIQYRDQLQAEGLIFSGMSPDGRLPEIVEVKDHPWFIGVQFHPELKSKPFAPHPLFADFVRAA 540          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_CHRVO (CTP synthase OS=Chromobacterium violaceum GN=pyrG PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 78/170 (45.88%), Postives = 104/170 (61.18%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRM-EIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQ+A+IE+AR V  +  ANSTEFD +T  P V  + E              ++MGGTMRLG ++    V    +A++YG+ T I ERHRHRYEVN   I RLE AGL+ +G+    +++ E +EL  H +F   QFHPE+ S P    PLF+  + AA
Sbjct:  369 ENDIPYLGICLGMQIALIEYARDVAGMAGANSTEFDLDTNFPVVALIDEWVNHDGKIEKRDENSNMGGTMRLGGQQCDL-VPGSLAARVYGS-TEITERHRHRYEVNNYYIQRLEQAGLTISGRSAGHEKLVETIELTGHRWFFACQFHPEFTSTPRDGHPLFIAYVKAA 536          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_CHLCH (CTP synthase OS=Chlorobium chlorochromatii (strain CaD3) GN=pyrG PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 74/159 (46.54%), Postives = 94/159 (59.12%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT-HMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E  IP+ GICLGMQ A IEFAR+V +L+DANSTEF+   +   +  M    K    GGTMRLGS      + D   A +   +  ++ERHRHRYE N       E  G+ F+G     + +EIVE+ NH +F+GVQFHPE KSR  K  PLF   +AAA
Sbjct:  381 EQNIPFFGICLGMQCATIEFARNVCDLQDANSTEFNKRARFAIIDLMEHQKKVKEKGGTMRLGSYPCI--ITDGSKAHMAYQKFLVNERHRHRYEFNNSFRTLFEERGMLFSGTSPNGELIEIVEIKNHRWFVGVQFHPELKSRVQKVHPLFHSFVAAA 537          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_BURCM (CTP synthase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=pyrG PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 76/171 (44.44%), Postives = 103/171 (60.23%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPN--HPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E ++PYLGICLGMQ+AVIEFAR V+ L+ ANSTEFD  T    V  + E             ++ +GGTMRLGS+R   +     + ++YG    ++ERHRHRYEVN   + +LE  GL  + +  +    E++ELP   HP+F+GVQFHPE+ S P    PLF   + AA
Sbjct:  374 ESKVPYLGICLGMQLAVIEFARDVVGLKQANSTEFDSETPERVVALITEWYDRDGKVETRTEESDLGGTMRLGSQRCPIK-PGTMAEEIYGKD--VNERHRHRYEVNNRFVPQLEAGGLIISARTPSEDLPEMMELPRSMHPWFVGVQFHPEFTSTPRDGHPLFKSFVEAA 541          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ACIC1 (CTP synthase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=pyrG PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.271e-31
Identity = 79/165 (47.88%), Postives = 99/165 (60.00%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPN--HPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IP LG+CLG+Q  V+EFAR+V+ L  ANSTEFDP T  P +  M +       +  MGGTMRLGS        +    +LYG    + ERHRHRYEVN     +LE AGL  +G     Q +E VELP   HP+++  Q HPE +SRP +P PLF GLI AA
Sbjct:  377 ENGIPTLGLCLGLQCMVVEFARNVIGLAGANSTEFDPATPYPVIATMADQMEVVAGRRDMGGTMRLGSYPAIL-APETLVHELYGCLE-VRERHRHRYEVNNAYRQQLEAAGLVISGTSPDGQLVEFVELPRSVHPFYVATQAHPELRSRPTRPHPLFTGLIRAA 539          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_WOLPM (CTP synthase OS=Wolbachia pipientis wMel GN=pyrG PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.660e-31
Identity = 75/157 (47.77%), Postives = 99/157 (63.06%), Query Frame = 2
Query:    8 HRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            + IP+ GICLGMQ+A+IEFAR+V+ L DA+S EF  N K+P ++ +       +GGTMRLG+ +        K    Y N T I ERHRHRY +N D    LE  GL  +G  E    +E VEL +HP+FIGVQFHPE++S+P  P PLF+  + AA
Sbjct:  373 NNIPFFGICLGMQLAIIEFARNVVKLEDAHSEEFR-NCKHP-IVKLAGDQDDDLGGTMRLGAYKCNINANS-KMMDAYSNTT-ISERHRHRYIINSDYKDDLEKNGLLCSGISEDGTCIEAVELESHPWFIGVQFHPEFQSKPFSPHPLFVSFVKAA 525          
The following BLAST results are available for this feature:
BLAST of CK935398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_BACP29.735e-3244.65CTP synthase OS=Bacillus pumilus (strain SAFR-032)... [more]
PYRG_SYNP21.271e-3146.20CTP synthase OS=Synechococcus sp. (strain ATCC 272... [more]
PYRG_PSYCK1.271e-3145.56CTP synthase OS=Psychrobacter cryohalolentis (stra... [more]
PYRG_PROM31.271e-3145.28CTP synthase OS=Prochlorococcus marinus (strain MI... [more]
PYRG_DINSH1.271e-3147.67CTP synthase OS=Dinoroseobacter shibae (strain DFL... [more]
PYRG_CHRVO1.271e-3145.88CTP synthase OS=Chromobacterium violaceum GN=pyrG ... [more]
PYRG_CHLCH1.271e-3146.54CTP synthase OS=Chlorobium chlorochromatii (strain... [more]
PYRG_BURCM1.271e-3144.44CTP synthase OS=Burkholderia ambifaria (strain ATC... [more]
PYRG_ACIC11.271e-3147.88CTP synthase OS=Acidothermus cellulolyticus (strai... [more]
PYRG_WOLPM1.660e-3147.77CTP synthase OS=Wolbachia pipientis wMel GN=pyrG P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935398 ID=CK935398; Name=CK935398; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGCACAGAATTCCTTACCTTGGCATTTGTCTTGGAATGCAAGTTG
CTGTCATCGAGTTTGCGCGATCTGTTCTTAATCTGAGAGATGCTAACAGC
ACAGAATTTGATCCTAACACCAAAAATCCTTGTGTTATATTTATGCCGGA
GGGCTCAAAAACTCATATGGGAGGCACTATGCGTCTTGGGTCAAGAAGGA
CATACTTCCAAGTCAAGGACTGCAAATCTGCAAAATTATATGGAAACAGA
ACTTTCATTGATGAGAGACATCGTCATAGATACGAGGTGAATCCTGATAT
GATAGCACGCTTGGAAAATGCCGGTCTCTCTTTCACTGGCAAGGATGAAA
CTAGCCAACGCATGGAGATTGTTGAGCTGCCTAACCATCCCTACTTCATT
GGTGTTCAATTCCATCCCGAATACAAATCTAGGCCTGGAAAACCGTCTCC
TTTGTTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTAGATACTCTCA
TACAAGGATCTGGGAGCCAAGGAAATCTCTCTGCTAAGCTTGGCAACGGC
ATTGCAATGGAGAAGGTATACCAAAAGGGAACTACGAAACCTGCGAAAGT
GTTATCAGATGGTTTATACAGCTATTGCAATGGTGTGCAAGTTTGAAGGC
ATTTTCTGCCATTGGTTTTAGGATCTATTAGTTATCAAGCAGTACTGATT
CTGCCAAAGAGTTTTAGTAGCAATCTTAGGATTTCTCTGTACAGTCATTT
GAGTATGGATAGGTGTTTCAGCTTGCTTTCAAAAGGGACTGCAGACAGAC
CAAACAGAGCTGAATCCCGATCTTTTAAATGGGATAGCCTGTTGTGTTTC
ATAGTTGTAATGTAACCTTTTCTTGACCTATGGCT
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