CK935398

Overview
NameCK935398
Unique NameCK935398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13444 contig Csv1_Contig13444:266..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_PELCD (CTP synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=pyrG PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.169e-31
Identity = 72/159 (45.28%), Postives = 100/159 (62.89%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSK-THMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+RIP+ GICLGMQ+AV+EFAR+V  + D  S+EF  +  NP +  M    K T  GGTMRLG+      V+   + +++G    ++ERHRHRYE N     RLE  GL  +G       +EIVE+ +HP+F+G QFHPE++SRP +P PLF   + A+
Sbjct:  371 ENRIPFFGICLGMQMAVVEFARNVCGIDDCFSSEFKEDAANPVIHIMENQKKVTRKGGTMRLGAYPCQL-VEGTLARRIFGTGD-VEERHRHRYEFNNAYQERLEKGGLVISGVYRDVGLVEIVEIEDHPWFLGCQFHPEFRSRPMEPHPLFESFVGAS 527          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_LISMF (CTP synthase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=pyrG PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.169e-31
Identity = 67/158 (42.41%), Postives = 100/158 (63.29%), Query Frame = 2
Query:    8 HRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT-HMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            +++PY GICLGMQ+A +EFAR+VL L  A+S E +P TK+  +  +PE     +MGGT+RLG      + +  K+   YG  T ++ERHRHRYE N +   ++E AG+  +      + +E+VEL +HP+F+  Q+HPE+ SRP +P  LF   + AA
Sbjct:  373 NKVPYFGICLGMQLATVEFARNVLGLEGAHSAEIEPETKHNIIDLLPEQKNIENMGGTLRLGLYPARIK-QGTKAEAAYGT-TLVEERHRHRYEFNNEYREQMEEAGMIVSATSPDGRLVEVVELADHPWFVACQYHPEFISRPNRPQSLFKDFVGAA 528          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_LISIN (CTP synthase OS=Listeria innocua GN=pyrG PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.169e-31
Identity = 67/158 (42.41%), Postives = 100/158 (63.29%), Query Frame = 2
Query:    8 HRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKT-HMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            +++PY GICLGMQ+A +EFAR+VL L  A+S E +P TK+  +  +PE     +MGGT+RLG      + +  K+   YG  T ++ERHRHRYE N +   ++E AG+  +      + +E+VEL +HP+F+  Q+HPE+ SRP +P  LF   + AA
Sbjct:  373 NKVPYFGICLGMQLATVEFARNVLGLEGAHSAEIEPETKHNIIDLLPEQKNIENMGGTLRLGLYPARIK-QGTKAEAAYGT-TLVEERHRHRYEFNNEYREQMEEAGMIVSATSPDGRLVEVVELADHPWFVACQYHPEFISRPNRPQSLFKDFVGAA 528          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_CHLAB (CTP synthase OS=Chlamydophila abortus GN=pyrG PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.169e-31
Identity = 77/159 (48.43%), Postives = 98/159 (61.64%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMP-EGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E  IPY GICLGMQV V+E+AR VL+L  ANSTE D +T +P +  +  + S    GGTMRLG+          K   +YG    + ERHRHRYEVN + I +L++ GL   G        EIVE+ +HP+ IGVQFHPE+ S+  KP PLF+G I AA
Sbjct:  371 ERGIPYFGICLGMQVLVVEYARHVLHLEHANSTEMDKDTPDPVICMLDWQASLIATGGTMRLGAYPCALS-PGSKVYAMYGQPEIM-ERHRHRYEVNFNYIQQLKDHGLDIVGTCPEQGLCEIVEIKDHPWMIGVQFHPEFLSKLIKPHPLFVGFIEAA 527          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_BACC1 (CTP synthase OS=Bacillus cereus (strain ATCC 10987) GN=pyrG PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.169e-31
Identity = 71/161 (44.10%), Postives = 97/161 (60.25%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH-MGGTMRLGSRRTYFQVKDCKSAKLYG--NRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+++P+LGICLGMQ+A IEFAR+VL L  ANS+E +P+T    +  +PE      +GGT+RLG     +  K  +    Y   N   + ERHRHRYE N      +E AG  F+G     + +EIVEL +HP+F+  QFHPE  SRP +P PLF   + A+
Sbjct:  372 ENKVPFLGICLGMQLASIEFARNVLGLEGANSSEINPDTPYAIIDLLPEQKDVEDLGGTLRLG----LYPCKLAEETNAYNAYNEPVVYERHRHRYEFNNQFRPDMEKAGFVFSGTSPDGRLVEIVELKDHPWFVAAQFHPELVSRPNRPQPLFHDFVRAS 528          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_TREPS (CTP synthase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=pyrG PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.832e-31
Identity = 76/161 (47.20%), Postives = 99/161 (61.49%), Query Frame = 2
Query:   14 IPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDT 496
            +PYLGICLGMQ+AVIEFAR+VL L  A+S EF  +T +P V  +P    T  GG++RLG  R     +  ++  LYG R  + ERHRHRY +N    AR E + L   G D     +E+VE   HP+F GVQFHPE+ SRP +  PLF  L+AA   + D+
Sbjct:  417 LPYLGICLGMQIAVIEFARNVLLLASAHSREFAVDTPHPVVDLLPGCVDTPTGGSLRLGQYRCLL-AEGSRARALYG-RGEVWERHRHRYGLNAAYRARFEASALRPVGVDSDCGAVEVVEHGEHPWFFGVQFHPEFCSRPNRAHPLFRALVAAGLERKDS 575          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_TREPA (CTP synthase OS=Treponema pallidum GN=pyrG PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.832e-31
Identity = 76/161 (47.20%), Postives = 99/161 (61.49%), Query Frame = 2
Query:   14 IPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDT 496
            +PYLGICLGMQ+AVIEFAR+VL L  A+S EF  +T +P V  +P    T  GG++RLG  R     +  ++  LYG R  + ERHRHRY +N    AR E + L   G D     +E+VE   HP+F GVQFHPE+ SRP +  PLF  L+AA   + D+
Sbjct:  417 LPYLGICLGMQIAVIEFARNVLLLASAHSREFAVDTPHPVVDLLPGCVDTPTGGSLRLGQYRCLL-AEGSRARALYG-RGEVWERHRHRYGLNAAYRARFEASALRPVGVDSDCGAVEVVEHGEHPWFFGVQFHPEFCSRPNRAHPLFRALVAAGLERKDS 575          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_LEGPL (CTP synthase OS=Legionella pneumophila (strain Lens) GN=pyrG PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.832e-31
Identity = 76/169 (44.97%), Postives = 102/169 (60.36%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----GSK------THMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            EH++P+LGICLGMQ AVIEFAR+V+ L  ANSTEF+  T  P +  + E     GSK      T +GGTMRLG +  +   +   + K+YG    I ERHRHRYEVN   +  L   GL  +G+   +  +E++EL +HP+F+  QFHPE+ S P    PLF   + AA
Sbjct:  369 EHKVPFLGICLGMQTAVIEFARNVVGLTGANSTEFNKETLYPVLGLISEWMDADGSKQTRDESTDLGGTMRLGGQYCHL-AEGTLARKVYGKSQII-ERHRHRYEVNNKYVDSLVKHGLIISGRSADNSLVEMIELADHPWFLACQFHPEFTSNPRDSHPLFKEFVFAA 535          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_LEGPH (CTP synthase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=pyrG PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.832e-31
Identity = 76/169 (44.97%), Postives = 102/169 (60.36%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----GSK------THMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            EH++P+LGICLGMQ AVIEFAR+V+ L  ANSTEF+  T  P +  + E     GSK      T +GGTMRLG +  +   +   + K+YG    I ERHRHRYEVN   +  L   GL  +G+   +  +E++EL +HP+F+  QFHPE+ S P    PLF   + AA
Sbjct:  369 EHKVPFLGICLGMQTAVIEFARNVVGLTGANSTEFNKETLYPVLGLISEWMDADGSKQIRDENTDLGGTMRLGGQYCHL-AEGTLARKVYGKPQII-ERHRHRYEVNNKYVDSLVKHGLIISGRSADNSLVEMIELADHPWFLACQFHPEFTSNPRDSHPLFKEFVLAA 535          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_LEGPC (CTP synthase OS=Legionella pneumophila (strain Corby) GN=pyrG PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.832e-31
Identity = 76/169 (44.97%), Postives = 102/169 (60.36%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----GSK------THMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            EH++P+LGICLGMQ AVIEFAR+V+ L  ANSTEF+  T  P +  + E     GSK      T +GGTMRLG +  +   +   + K+YG    I ERHRHRYEVN   +  L   GL  +G+   +  +E++EL +HP+F+  QFHPE+ S P    PLF   + AA
Sbjct:  369 EHKVPFLGICLGMQTAVIEFARNVVGLTGANSTEFNKETLYPVLGLISEWMDADGSKQIRDENTDLGGTMRLGGQYCHL-AEGTLARKVYGKPQII-ERHRHRYEVNNKYVDSLVKHGLIISGRSADNSLVEMIELADHPWFLACQFHPEFTSNPRDSHPLFKEFVLAA 535          
The following BLAST results are available for this feature:
BLAST of CK935398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_PELCD2.169e-3145.28CTP synthase OS=Pelobacter carbinolicus (strain DS... [more]
PYRG_LISMF2.169e-3142.41CTP synthase OS=Listeria monocytogenes serotype 4b... [more]
PYRG_LISIN2.169e-3142.41CTP synthase OS=Listeria innocua GN=pyrG PE=3 SV=1[more]
PYRG_CHLAB2.169e-3148.43CTP synthase OS=Chlamydophila abortus GN=pyrG PE=3... [more]
PYRG_BACC12.169e-3144.10CTP synthase OS=Bacillus cereus (strain ATCC 10987... [more]
PYRG_TREPS2.832e-3147.20CTP synthase OS=Treponema pallidum subsp. pallidum... [more]
PYRG_TREPA2.832e-3147.20CTP synthase OS=Treponema pallidum GN=pyrG PE=1 SV... [more]
PYRG_LEGPL2.832e-3144.97CTP synthase OS=Legionella pneumophila (strain Len... [more]
PYRG_LEGPH2.832e-3144.97CTP synthase OS=Legionella pneumophila subsp. pneu... [more]
PYRG_LEGPC2.832e-3144.97CTP synthase OS=Legionella pneumophila (strain Cor... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935398 ID=CK935398; Name=CK935398; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGCACAGAATTCCTTACCTTGGCATTTGTCTTGGAATGCAAGTTG
CTGTCATCGAGTTTGCGCGATCTGTTCTTAATCTGAGAGATGCTAACAGC
ACAGAATTTGATCCTAACACCAAAAATCCTTGTGTTATATTTATGCCGGA
GGGCTCAAAAACTCATATGGGAGGCACTATGCGTCTTGGGTCAAGAAGGA
CATACTTCCAAGTCAAGGACTGCAAATCTGCAAAATTATATGGAAACAGA
ACTTTCATTGATGAGAGACATCGTCATAGATACGAGGTGAATCCTGATAT
GATAGCACGCTTGGAAAATGCCGGTCTCTCTTTCACTGGCAAGGATGAAA
CTAGCCAACGCATGGAGATTGTTGAGCTGCCTAACCATCCCTACTTCATT
GGTGTTCAATTCCATCCCGAATACAAATCTAGGCCTGGAAAACCGTCTCC
TTTGTTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTAGATACTCTCA
TACAAGGATCTGGGAGCCAAGGAAATCTCTCTGCTAAGCTTGGCAACGGC
ATTGCAATGGAGAAGGTATACCAAAAGGGAACTACGAAACCTGCGAAAGT
GTTATCAGATGGTTTATACAGCTATTGCAATGGTGTGCAAGTTTGAAGGC
ATTTTCTGCCATTGGTTTTAGGATCTATTAGTTATCAAGCAGTACTGATT
CTGCCAAAGAGTTTTAGTAGCAATCTTAGGATTTCTCTGTACAGTCATTT
GAGTATGGATAGGTGTTTCAGCTTGCTTTCAAAAGGGACTGCAGACAGAC
CAAACAGAGCTGAATCCCGATCTTTTAAATGGGATAGCCTGTTGTGTTTC
ATAGTTGTAATGTAACCTTTTCTTGACCTATGGCT
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