CK935398

Overview
NameCK935398
Unique NameCK935398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SODGM (CTP synthase OS=Sodalis glossinidius (strain morsitans) GN=pyrG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.511e-37
Identity = 83/169 (49.11%), Postives = 106/169 (62.72%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E  IPYLGICLGMQVA+IEFAR V  ++DANSTEF P+ K P V  + E             ++H+GGTMRLGS+  +    D  +  LYG  T + ERHRHRYEVN  ++  LE+AGL   G     + +EI+E P+HP+F+  QFHPE+ S P    PLF GL+ AA
Sbjct:  370 EQNIPYLGICLGMQVALIEFARHVAGMQDANSTEFVPDCKYPVVALITEWRDEDGNVEMRSEQSHLGGTMRLGSQLCHL-ADDSLARSLYGEATIL-ERHRHRYEVNNMLLKHLESAGLRVAGWSGDHKLVEIIEYPDHPWFVASQFHPEFTSTPRDGHPLFAGLVKAA 536          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_MESFL (CTP synthase OS=Mesoplasma florum GN=pyrG PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.511e-37
Identity = 80/157 (50.96%), Postives = 104/157 (66.24%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAA 475
            E+ IPYLGICLGMQ+A I  AR  LNL +ANSTEFD +   P   F+      ++GGT+RLG+       +  K+ KLYG+R  + ERHRHRYE N +    LE  GL F+G  E  + +EI+ELPNHP+F+G Q+HPE+ SRP KP+PLF G + A
Sbjct:  372 ENSIPYLGICLGMQIATISIARDWLNLPEANSTEFDHSGAVPIFDFIRGIDVQNLGGTLRLGAFYKTTIKEGTKAEKLYGSRE-VFERHRHRYEFNNEYKKALEEKGLVFSGIYEEKKLVEIIELPNHPFFVGSQYHPEFTSRPNKPNPLFKGFVEA 527          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_PYRAB (CTP synthase OS=Pyrococcus abyssi GN=pyrG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.892e-37
Identity = 84/162 (51.85%), Postives = 108/162 (66.67%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYG--NRTFIDERHRHRYEVNPDMIARLENAGLSFTG-KDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IP+LGIC G Q+ V+EFAR+VL ++ A+STE DP T  P V  MPE  +   +GGTMRLG+    + VK  K    Y    +  + ERHRHR+EVNPD I   E AGL F+G   +  +RMEI+ELP+  YFI  QFHPE+KSRP KP+P+F GL+ AA
Sbjct:  369 ENDIPFLGICFGFQLTVVEFARNVLGMKGAHSTEIDPQTPYPVVDLMPEQRNLDKLGGTMRLGA----YPVKIKKGTLAYELYKKDLVYERHRHRWEVNPDYIEAFEKAGLVFSGIAGDDERRMEILELPDKRYFIATQFHPEFKSRPMKPAPVFHGLVKAA 526          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_HAEIN (CTP synthase OS=Haemophilus influenzae GN=pyrG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.892e-37
Identity = 78/169 (46.15%), Postives = 111/169 (65.68%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-----------KTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E++IPYLGICLGMQ+A+IE+AR+V  L  ANS+EFD + + P V  + E             ++ +GGTMRLG+++ +  V   ++ +LYG  T I+ERHRHRYEVN  ++ ++E AGL  TG     + +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENKIPYLGICLGMQIALIEYARNVAGLTKANSSEFDKDCEQPVVALITEWQDAEGNTEVRTDESDLGGTMRLGAQQCHL-VSGSRARELYGKET-IEERHRHRYEVNNTLLPQIEKAGLKVTGLSADKKLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_HAEIG (CTP synthase OS=Haemophilus influenzae (strain PittGG) GN=pyrG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.892e-37
Identity = 78/169 (46.15%), Postives = 111/169 (65.68%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-----------KTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E++IPYLGICLGMQ+A+IE+AR+V  L  ANS+EFD + + P V  + E             ++ +GGTMRLG+++ +  V   ++ +LYG  T I+ERHRHRYEVN  ++ ++E AGL  TG     + +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENKIPYLGICLGMQIALIEYARNVAGLTKANSSEFDKDCEQPVVALITEWQDAEGNTEVRTDESDLGGTMRLGAQQCHL-VSGSRARELYGKET-IEERHRHRYEVNNTLLPQIEKAGLKVTGLSADKKLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_HAEIE (CTP synthase OS=Haemophilus influenzae (strain PittEE) GN=pyrG PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.892e-37
Identity = 78/169 (46.15%), Postives = 111/169 (65.68%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-----------KTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E++IPYLGICLGMQ+A+IE+AR+V  L  ANS+EFD + + P V  + E             ++ +GGTMRLG+++ +  V   ++ +LYG  T I+ERHRHRYEVN  ++ ++E AGL  TG     + +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENKIPYLGICLGMQIALIEYARNVAGLTKANSSEFDKDCEQPVVALITEWQDAEGNTEVRTDESDLGGTMRLGAQQCHL-VSGSRARELYGKET-IEERHRHRYEVNNTLLPQIEKAGLKVTGLSADKKLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_PYRHO (CTP synthase OS=Pyrococcus horikoshii GN=pyrG PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 1.005e-36
Identity = 82/160 (51.25%), Postives = 108/160 (67.50%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH-MGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTG-KDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IP+LGIC G Q+ V+EFAR+VL ++ A+STE DP T  P V  MPE      +GGTMRLG+     + K   + +LY  +  + ERHRHR+EVNPD I   E AGL F+G   +  +RMEI+ELP+  YFI  QFHPE+KSRP +P+P+F GL+ AA
Sbjct:  369 ENDIPFLGICFGFQLTVVEFARNVLGMKGAHSTEIDPQTPYPVVDLMPEQRNLEKLGGTMRLGAYPVKIK-KGTLAYRLY-KKELVYERHRHRWEVNPDYIEAFEKAGLVFSGVAGDDERRMEILELPDKRYFIATQFHPEFKSRPMRPAPVFHGLVRAA 526          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_MANSM (CTP synthase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=pyrG PE=3 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 1.005e-36
Identity = 80/169 (47.34%), Postives = 107/169 (63.31%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA IE+AR V  L  ANS+EFD N   P V  + E              + +GGTMRLG+++ +  ++  K+ +LYG  T I+ERHRHRYEVN  ++ ++E AGL  TG     + +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVAFIEYARHVAGLTQANSSEFDKNCPQPVVGLITEWQDADGSVEQRSENSDLGGTMRLGAQQCHL-IEGSKARELYGKET-IEERHRHRYEVNNTLLPQIEAAGLKVTGLSADKKLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_HAEI8 (CTP synthase OS=Haemophilus influenzae (strain 86-028NP) GN=pyrG PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.313e-36
Identity = 78/169 (46.15%), Postives = 110/169 (65.09%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGS-----------KTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E++IPYLGICLGMQ+A+IE+AR+V  L  ANS+EFD + + P V  + E             ++ +GGTMRLG+++ +  V    + +LYG  T I+ERHRHRYEVN  ++ ++E AGL  TG     + +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENKIPYLGICLGMQIALIEYARNVAGLTKANSSEFDKDCEQPVVALITEWQDAEGNTEVRTDESDLGGTMRLGAQQCHL-VSGSHARELYGKET-IEERHRHRYEVNNTLLPQIEKAGLKVTGLSADKKLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536          
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_COPPD (CTP synthase OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=pyrG PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.313e-36
Identity = 78/167 (46.71%), Postives = 111/167 (66.47%), Query Frame = 2
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPEGSKTH-MGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAACGQLDTLI 502
            E+++P LG+CLGMQV  IEFAR+VL L+DANSTEFDPNT  P +  +PE  +   +GG+MRLG+      V+  +   LY N+  + ERHRHR+E N +     EN G   +G  E    +E++EL +HP+++GVQ+HPE+KSRP  P PLFLGL++ A  +   ++
Sbjct:  373 ENKMPTLGLCLGMQVMSIEFARNVLGLKDANSTEFDPNTTYPVISLLPEQMQVRDLGGSMRLGAYPCTL-VEGTRVHALY-NKPVVFERHRHRFEFNNEFREAFENNGFQVSGLYEPKDLVEVLELKDHPFYVGVQYHPEFKSRPMVPHPLFLGLLSEAVAKASPVL 537          
The following BLAST results are available for this feature:
BLAST of CK935398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_SODGM4.511e-3749.11CTP synthase OS=Sodalis glossinidius (strain morsi... [more]
PYRG_MESFL4.511e-3750.96CTP synthase OS=Mesoplasma florum GN=pyrG PE=3 SV=... [more]
PYRG_PYRAB5.892e-3751.85CTP synthase OS=Pyrococcus abyssi GN=pyrG PE=3 SV=... [more]
PYRG_HAEIN5.892e-3746.15CTP synthase OS=Haemophilus influenzae GN=pyrG PE=... [more]
PYRG_HAEIG5.892e-3746.15CTP synthase OS=Haemophilus influenzae (strain Pit... [more]
PYRG_HAEIE5.892e-3746.15CTP synthase OS=Haemophilus influenzae (strain Pit... [more]
PYRG_PYRHO1.005e-3651.25CTP synthase OS=Pyrococcus horikoshii GN=pyrG PE=3... [more]
PYRG_MANSM1.005e-3647.34CTP synthase OS=Mannheimia succiniciproducens (str... [more]
PYRG_HAEI81.313e-3646.15CTP synthase OS=Haemophilus influenzae (strain 86-... [more]
PYRG_COPPD1.313e-3646.71CTP synthase OS=Coprothermobacter proteolyticus (s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935398 ID=CK935398; Name=CK935398; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGCACAGAATTCCTTACCTTGGCATTTGTCTTGGAATGCAAGTTG
CTGTCATCGAGTTTGCGCGATCTGTTCTTAATCTGAGAGATGCTAACAGC
ACAGAATTTGATCCTAACACCAAAAATCCTTGTGTTATATTTATGCCGGA
GGGCTCAAAAACTCATATGGGAGGCACTATGCGTCTTGGGTCAAGAAGGA
CATACTTCCAAGTCAAGGACTGCAAATCTGCAAAATTATATGGAAACAGA
ACTTTCATTGATGAGAGACATCGTCATAGATACGAGGTGAATCCTGATAT
GATAGCACGCTTGGAAAATGCCGGTCTCTCTTTCACTGGCAAGGATGAAA
CTAGCCAACGCATGGAGATTGTTGAGCTGCCTAACCATCCCTACTTCATT
GGTGTTCAATTCCATCCCGAATACAAATCTAGGCCTGGAAAACCGTCTCC
TTTGTTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTAGATACTCTCA
TACAAGGATCTGGGAGCCAAGGAAATCTCTCTGCTAAGCTTGGCAACGGC
ATTGCAATGGAGAAGGTATACCAAAAGGGAACTACGAAACCTGCGAAAGT
GTTATCAGATGGTTTATACAGCTATTGCAATGGTGTGCAAGTTTGAAGGC
ATTTTCTGCCATTGGTTTTAGGATCTATTAGTTATCAAGCAGTACTGATT
CTGCCAAAGAGTTTTAGTAGCAATCTTAGGATTTCTCTGTACAGTCATTT
GAGTATGGATAGGTGTTTCAGCTTGCTTTCAAAAGGGACTGCAGACAGAC
CAAACAGAGCTGAATCCCGATCTTTTAAATGGGATAGCCTGTTGTGTTTC
ATAGTTGTAATGTAACCTTTTCTTGACCTATGGCT
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