CK935398

Overview
NameCK935398
Unique NameCK935398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13444 contig Csv1_Contig13444:266..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SALTY (CTP synthase OS=Salmonella typhimurium GN=pyrG PE=3 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T + ERHRHRYEVN  ++ ++E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGASTIV-ERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SALTI (CTP synthase OS=Salmonella typhi GN=pyrG PE=3 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T + ERHRHRYEVN  ++ ++E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGASTIV-ERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SALSV (CTP synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T + ERHRHRYEVN  ++ ++E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGASTIV-ERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SALPC (CTP synthase OS=Salmonella paratyphi C (strain RKS4594) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T + ERHRHRYEVN  ++ ++E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGASTIV-ERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SALPB (CTP synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T + ERHRHRYEVN  ++ ++E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGASTIV-ERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SALHS (CTP synthase OS=Salmonella heidelberg (strain SL476) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T + ERHRHRYEVN  ++ ++E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGASTIV-ERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SALG2 (CTP synthase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T + ERHRHRYEVN  ++ ++E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGASTIV-ERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SALEP (CTP synthase OS=Salmonella enteritidis PT4 (strain P125109) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T + ERHRHRYEVN  ++ ++E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGASTIV-ERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SALDC (CTP synthase OS=Salmonella dublin (strain CT_02021853) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T + ERHRHRYEVN  ++ ++E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGASTIV-ERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_SALCH (CTP synthase OS=Salmonella choleraesuis GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 81/169 (47.93%), Postives = 107/169 (63.31%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T + ERHRHRYEVN  ++ ++E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMDNANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGASTIV-ERHRHRYEVNNMLLKQIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
The following BLAST results are available for this feature:
BLAST of CK935398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_SALTY2.239e-3647.93CTP synthase OS=Salmonella typhimurium GN=pyrG PE=... [more]
PYRG_SALTI2.239e-3647.93CTP synthase OS=Salmonella typhi GN=pyrG PE=3 SV=2[more]
PYRG_SALSV2.239e-3647.93CTP synthase OS=Salmonella schwarzengrund (strain ... [more]
PYRG_SALPC2.239e-3647.93CTP synthase OS=Salmonella paratyphi C (strain RKS... [more]
PYRG_SALPB2.239e-3647.93CTP synthase OS=Salmonella paratyphi B (strain ATC... [more]
PYRG_SALHS2.239e-3647.93CTP synthase OS=Salmonella heidelberg (strain SL47... [more]
PYRG_SALG22.239e-3647.93CTP synthase OS=Salmonella gallinarum (strain 287/... [more]
PYRG_SALEP2.239e-3647.93CTP synthase OS=Salmonella enteritidis PT4 (strain... [more]
PYRG_SALDC2.239e-3647.93CTP synthase OS=Salmonella dublin (strain CT_02021... [more]
PYRG_SALCH2.239e-3647.93CTP synthase OS=Salmonella choleraesuis GN=pyrG PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935398 ID=CK935398; Name=CK935398; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGCACAGAATTCCTTACCTTGGCATTTGTCTTGGAATGCAAGTTG
CTGTCATCGAGTTTGCGCGATCTGTTCTTAATCTGAGAGATGCTAACAGC
ACAGAATTTGATCCTAACACCAAAAATCCTTGTGTTATATTTATGCCGGA
GGGCTCAAAAACTCATATGGGAGGCACTATGCGTCTTGGGTCAAGAAGGA
CATACTTCCAAGTCAAGGACTGCAAATCTGCAAAATTATATGGAAACAGA
ACTTTCATTGATGAGAGACATCGTCATAGATACGAGGTGAATCCTGATAT
GATAGCACGCTTGGAAAATGCCGGTCTCTCTTTCACTGGCAAGGATGAAA
CTAGCCAACGCATGGAGATTGTTGAGCTGCCTAACCATCCCTACTTCATT
GGTGTTCAATTCCATCCCGAATACAAATCTAGGCCTGGAAAACCGTCTCC
TTTGTTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTAGATACTCTCA
TACAAGGATCTGGGAGCCAAGGAAATCTCTCTGCTAAGCTTGGCAACGGC
ATTGCAATGGAGAAGGTATACCAAAAGGGAACTACGAAACCTGCGAAAGT
GTTATCAGATGGTTTATACAGCTATTGCAATGGTGTGCAAGTTTGAAGGC
ATTTTCTGCCATTGGTTTTAGGATCTATTAGTTATCAAGCAGTACTGATT
CTGCCAAAGAGTTTTAGTAGCAATCTTAGGATTTCTCTGTACAGTCATTT
GAGTATGGATAGGTGTTTCAGCTTGCTTTCAAAAGGGACTGCAGACAGAC
CAAACAGAGCTGAATCCCGATCTTTTAAATGGGATAGCCTGTTGTGTTTC
ATAGTTGTAATGTAACCTTTTCTTGACCTATGGCT
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