CK935398

Overview
NameCK935398
Unique NameCK935398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13444 contig Csv1_Contig13444:266..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_KLEP7 (CTP synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 82/169 (48.52%), Postives = 106/169 (62.72%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+IEFAR+V  + +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++      D    +LYG  T I ERHRHRYEVN  ++  +E AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIEFARNVAGMENANSTEFVPDCKYPVVALITEWRDEDGNVEVRSEKSDLGGTMRLGAQQCQLS-DDSLVRQLYGEPT-ITERHRHRYEVNNMLLKPIEAAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_HAMD5 (CTP synthase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 79/169 (46.75%), Postives = 112/169 (66.27%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+RIPYLGICLGMQVA+IEFAR V  +  ANSTEFDP+ + P +  + E             K+++GGTMR+G+++ +  VK   + +LY  +  I ERHRHRYEVN  ++  +E AGLS +G+    + +EI+ELP+HP+F+  QFHPE+ S P    PLF+G + +A
Sbjct:  370 ENRIPYLGICLGMQVALIEFARHVAGMEKANSTEFDPDARYPVIGLITEWQNEDGEIAVRSEKSNLGGTMRVGAQKCHL-VKGSLTHQLY-EKPIIIERHRHRYEVNNMILPIIEAAGLSVSGRSMDKKLVEIIELPHHPWFVACQFHPEFTSTPRDGHPLFIGFVKSA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ESCF3 (CTP synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOUT (CTP synthase OS=Escherichia coli (strain UTI89 / UPEC) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOSM (CTP synthase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOSE (CTP synthase OS=Escherichia coli (strain SE11) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOLU (CTP synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOLI (CTP synthase OS=Escherichia coli (strain K12) GN=pyrG PE=1 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOLC (CTP synthase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOL6 (CTP synthase OS=Escherichia coli O6 GN=pyrG PE=3 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
The following BLAST results are available for this feature:
BLAST of CK935398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_KLEP72.239e-3648.52CTP synthase OS=Klebsiella pneumoniae subsp. pneum... [more]
PYRG_HAMD52.239e-3646.75CTP synthase OS=Hamiltonella defensa subsp. Acyrth... [more]
PYRG_ESCF32.239e-3647.34CTP synthase OS=Escherichia fergusonii (strain ATC... [more]
PYRG_ECOUT2.239e-3647.34CTP synthase OS=Escherichia coli (strain UTI89 / U... [more]
PYRG_ECOSM2.239e-3647.34CTP synthase OS=Escherichia coli (strain SMS-3-5 /... [more]
PYRG_ECOSE2.239e-3647.34CTP synthase OS=Escherichia coli (strain SE11) GN=... [more]
PYRG_ECOLU2.239e-3647.34CTP synthase OS=Escherichia coli O17:K52:H18 (stra... [more]
PYRG_ECOLI2.239e-3647.34CTP synthase OS=Escherichia coli (strain K12) GN=p... [more]
PYRG_ECOLC2.239e-3647.34CTP synthase OS=Escherichia coli (strain ATCC 8739... [more]
PYRG_ECOL62.239e-3647.34CTP synthase OS=Escherichia coli O6 GN=pyrG PE=3 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935398 ID=CK935398; Name=CK935398; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGCACAGAATTCCTTACCTTGGCATTTGTCTTGGAATGCAAGTTG
CTGTCATCGAGTTTGCGCGATCTGTTCTTAATCTGAGAGATGCTAACAGC
ACAGAATTTGATCCTAACACCAAAAATCCTTGTGTTATATTTATGCCGGA
GGGCTCAAAAACTCATATGGGAGGCACTATGCGTCTTGGGTCAAGAAGGA
CATACTTCCAAGTCAAGGACTGCAAATCTGCAAAATTATATGGAAACAGA
ACTTTCATTGATGAGAGACATCGTCATAGATACGAGGTGAATCCTGATAT
GATAGCACGCTTGGAAAATGCCGGTCTCTCTTTCACTGGCAAGGATGAAA
CTAGCCAACGCATGGAGATTGTTGAGCTGCCTAACCATCCCTACTTCATT
GGTGTTCAATTCCATCCCGAATACAAATCTAGGCCTGGAAAACCGTCTCC
TTTGTTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTAGATACTCTCA
TACAAGGATCTGGGAGCCAAGGAAATCTCTCTGCTAAGCTTGGCAACGGC
ATTGCAATGGAGAAGGTATACCAAAAGGGAACTACGAAACCTGCGAAAGT
GTTATCAGATGGTTTATACAGCTATTGCAATGGTGTGCAAGTTTGAAGGC
ATTTTCTGCCATTGGTTTTAGGATCTATTAGTTATCAAGCAGTACTGATT
CTGCCAAAGAGTTTTAGTAGCAATCTTAGGATTTCTCTGTACAGTCATTT
GAGTATGGATAGGTGTTTCAGCTTGCTTTCAAAAGGGACTGCAGACAGAC
CAAACAGAGCTGAATCCCGATCTTTTAAATGGGATAGCCTGTTGTGTTTC
ATAGTTGTAATGTAACCTTTTCTTGACCTATGGCT
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