CK935398

Overview
NameCK935398
Unique NameCK935398
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13444 contig Csv1_Contig13444:266..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOL5 (CTP synthase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOK1 (CTP synthase OS=Escherichia coli O1:K1 / APEC GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOHS (CTP synthase OS=Escherichia coli O9:H4 (strain HS) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECODH (CTP synthase OS=Escherichia coli (strain K12 / DH10B) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECOBW (CTP synthase OS=Escherichia coli (strain K12 / BW2952) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECO8A (CTP synthase OS=Escherichia coli O8 (strain IAI1) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECO81 (CTP synthase OS=Escherichia coli O81 (strain ED1a) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECO7I (CTP synthase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECO5E (CTP synthase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=pyrG PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
[Close]
BLAST of CK935398 vs. ExPASy Swiss-Prot
Match: PYRG_ECO57 (CTP synthase OS=Escherichia coli O157:H7 GN=pyrG PE=3 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 2 
Query:    5 EHRIPYLGICLGMQVAVIEFARSVLNLRDANSTEFDPNTKNPCVIFMPE-----------GSKTHMGGTMRLGSRRTYFQVKDCKSAKLYGNRTFIDERHRHRYEVNPDMIARLENAGLSFTGKDETSQRMEIVELPNHPYFIGVQFHPEYKSRPGKPSPLFLGLIAAA 478
            E+ IPYLGICLGMQVA+I++AR V N+ +ANSTEF P+ K P V  + E             K+ +GGTMRLG+++    V D    +LY   T + ERHRHRYEVN  ++ ++E+AGL   G+    Q +EI+E+PNHP+F+  QFHPE+ S P    PLF G + AA
Sbjct:  370 ENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQL-VDDSLVRQLYNAPTIV-ERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536
The following BLAST results are available for this feature:
BLAST of CK935398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PYRG_ECOL52.239e-3647.34CTP synthase OS=Escherichia coli O6:K15:H31 (strai... [more]
PYRG_ECOK12.239e-3647.34CTP synthase OS=Escherichia coli O1:K1 / APEC GN=p... [more]
PYRG_ECOHS2.239e-3647.34CTP synthase OS=Escherichia coli O9:H4 (strain HS)... [more]
PYRG_ECODH2.239e-3647.34CTP synthase OS=Escherichia coli (strain K12 / DH1... [more]
PYRG_ECOBW2.239e-3647.34CTP synthase OS=Escherichia coli (strain K12 / BW2... [more]
PYRG_ECO8A2.239e-3647.34CTP synthase OS=Escherichia coli O8 (strain IAI1) ... [more]
PYRG_ECO812.239e-3647.34CTP synthase OS=Escherichia coli O81 (strain ED1a)... [more]
PYRG_ECO7I2.239e-3647.34CTP synthase OS=Escherichia coli O7:K1 (strain IAI... [more]
PYRG_ECO5E2.239e-3647.34CTP synthase OS=Escherichia coli O157:H7 (strain E... [more]
PYRG_ECO572.239e-3647.34CTP synthase OS=Escherichia coli O157:H7 GN=pyrG P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935398 ID=CK935398; Name=CK935398; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGCACAGAATTCCTTACCTTGGCATTTGTCTTGGAATGCAAGTTG
CTGTCATCGAGTTTGCGCGATCTGTTCTTAATCTGAGAGATGCTAACAGC
ACAGAATTTGATCCTAACACCAAAAATCCTTGTGTTATATTTATGCCGGA
GGGCTCAAAAACTCATATGGGAGGCACTATGCGTCTTGGGTCAAGAAGGA
CATACTTCCAAGTCAAGGACTGCAAATCTGCAAAATTATATGGAAACAGA
ACTTTCATTGATGAGAGACATCGTCATAGATACGAGGTGAATCCTGATAT
GATAGCACGCTTGGAAAATGCCGGTCTCTCTTTCACTGGCAAGGATGAAA
CTAGCCAACGCATGGAGATTGTTGAGCTGCCTAACCATCCCTACTTCATT
GGTGTTCAATTCCATCCCGAATACAAATCTAGGCCTGGAAAACCGTCTCC
TTTGTTCTTAGGGCTTATAGCAGCAGCATGTGGGCAGTTAGATACTCTCA
TACAAGGATCTGGGAGCCAAGGAAATCTCTCTGCTAAGCTTGGCAACGGC
ATTGCAATGGAGAAGGTATACCAAAAGGGAACTACGAAACCTGCGAAAGT
GTTATCAGATGGTTTATACAGCTATTGCAATGGTGTGCAAGTTTGAAGGC
ATTTTCTGCCATTGGTTTTAGGATCTATTAGTTATCAAGCAGTACTGATT
CTGCCAAAGAGTTTTAGTAGCAATCTTAGGATTTCTCTGTACAGTCATTT
GAGTATGGATAGGTGTTTCAGCTTGCTTTCAAAAGGGACTGCAGACAGAC
CAAACAGAGCTGAATCCCGATCTTTTAAATGGGATAGCCTGTTGTGTTTC
ATAGTTGTAATGTAACCTTTTCTTGACCTATGGCT
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