CK935400

Overview
NameCK935400
Unique NameCK935400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935400 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 475.322 bits (1222), Expect = 1.992e-133
Identity = 225/295 (76.27%), Postives = 258/295 (87.46%), Query Frame = 2
Query:    5 ETPFSELALRFQEIGLERGWGDTAERVLEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLXRVVHGIDVF 889
            +TP+SE     Q +G ERGWGDTAERVLEM+       +APDP TLETFLGR+PMVFNVVIL+ HGYF Q  VLG PDTGGQ+VYILDQVR+LE EML RIK+QGLD+TP+ILI++RL+PDA GTTC QR+EKV GT+++ ILRVPFR+EKG++RKWISRF+VWPYLET+TED A EI  ELQG+PDLIIGNYSDGNIVASLL+HK+GVTQC IAHALEKTKYPDSDIYWK  +DKYHFSCQF+ADL+AMNH DFIITST+QEIAG+K+TVGQYESH AFT PGL RVVHGIDVF
Sbjct:  166 DTPYSEFEFVIQGMGFERGWGDTAERVLEMMHLLLDILQAPDPSTLETFLGRLPMVFNVVILSVHGYFGQAHVLGLPDTGGQIVYILDQVRSLEHEMLQRIKKQGLDVTPRILIVSRLIPDAKGTTCNQRMEKVSGTEHASILRVPFRSEKGILRKWISRFDVWPYLETFTEDAAGEIIGELQGRPDLIIGNYSDGNIVASLLSHKMGVTQCNIAHALEKTKYPDSDIYWKRFEDKYHFSCQFSADLMAMNHADFIITSTYQEIAGTKNTVGQYESHKAFTFPGLYRVVHGIDVF 460          
BLAST of CK935400 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 474.552 bits (1220), Expect = 3.397e-133
Identity = 227/295 (76.95%), Postives = 258/295 (87.46%), Query Frame = 2
Query:    5 ETPFSELALRFQEIGLERGWGDTAERVLEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLXRVVHGIDVF 889
            +T +SE     Q  G ERGWGDTA RVLEM+       +APDP TLETFLGR+PMVFNVVIL+PHG+F Q +VLG PDTGGQVVYILDQVRALE EML+RIK+QGLD TP+ILI+TRL+PDA GTTC QRLE+V GT+Y+ ILRVPFR+EKG++RKWISRF+VWP+LET+ EDVA EIA ELQ  PD IIGNYSDGN+VASLLA+K+GVTQCTIAHALEKTKYPDSDIYWK  +DKYHFSCQFTADLIAMN+ DFIITST+QEIAG+K+T+GQYESHTAFTLPGL RVVHGIDVF
Sbjct:  224 DTLYSEFEYELQGTGFERGWGDTAARVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALESEMLVRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEYTHILRVPFRSEKGILRKWISRFDVWPFLETFAEDVASEIAAELQCYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTIGQYESHTAFTLPGLYRVVHGIDVF 518          
BLAST of CK935400 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 462.225 bits (1188), Expect = 1.745e-129
Identity = 220/294 (74.83%), Postives = 256/294 (87.07%), Query Frame = 2
Query:    8 TPFSELALRFQEIGLERGWGDTAERVLEMIQXXXXXXEAPDPCTLETFLGRIPMVFNVVILTPHGYFAQDDVLGYPDTGGQVVYILDQVRALEDEMLLRIKQQGLDITPQILIITRLLPDAVGTTCGQRLEKVYGTKYSDILRVPFRTEKGVVRKWISRFEVWPYLETYTEDVAVEIAKELQGKPDLIIGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKNLDDKYHFSCQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLXRVVHGIDVF 889
            TP+SE     Q +G ERGWGDTA++V EM+       +APDP  LETFLGRIPMVFNVVIL+PHGYF Q +VLG PDTGGQVVYILDQVRALE+EMLLRI++QGL++ P+ILI+TRLLP+A GTTC QRLE+V GT+++ ILR+PFRTEKG++RKWISRF+VWPYLET+ ED + EI+ ELQG P+LIIGNYSDGN+VASLLA KLGV QC IAHALEKTKYP+SDIYW+N +DKYHFS QFTADLIAMN+ DFIITST+QEIAGSK+ VGQYESHTAFT+PGL RVVHGIDVF
Sbjct:  219 TPYSEFEFELQGMGFERGWGDTAQKVSEMVHLLLDILQAPDPSVLETFLGRIPMVFNVVILSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIQKQGLEVIPKILIVTRLLPEAKGTTCNQRLERVSGTEHAHILRIPFRTEKGILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYSDGNLVASLLASKLGVIQCNIAHALEKTKYPESDIYWRNHEDKYHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHTAFTMPGLYRVVHGIDVF 512          
The following BLAST results are available for this feature:
BLAST of CK935400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUSY_BETVU1.992e-13376.27Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUS2_PEA3.397e-13376.95Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUS2_ARATH1.745e-12974.83Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_B07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935400 ID=CK935400; Name=CK935400; organism=Citrus sinensis; type=EST; length=891bp
GGGAGAAACGCCATTCTCTGAGTTGGCACTAAGATTTCAGGAGATTGGTT
TGGAGAGAGGTTGGGGTGATACTGCTGAGCGTGTACTTGAGATGATTCAG
CTTCTTTTGGATCTTCTTGAGGCACCTGATCCGTGCACTCTTGAGACTTT
CCTTGGCAGAATCCCCATGGTCTTTAATGTTGTGATCCTTACTCCCCACG
GTTACTTTGCCCAAGACGATGTTTTGGGCTACCCTGATACTGGTGGTCAG
GTTGTTTACATCTTGGATCAAGTTCGTGCCTTGGAGGATGAGATGCTTCT
TCGTATCAAGCAGCAAGGACTTGATATCACCCCTCAAATCCTCATTATTA
CCCGTCTCCTCCCAGATGCAGTAGGCACAACATGTGGTCAGCGACTTGAG
AAAGTTTATGGAACTAAGTATTCAGATATACTTCGAGTTCCCTTTAGAAC
TGAGAAGGGAGTTGTCCGCAAGTGGATCTCACGATTTGAAGTCTGGCCTT
ATCTAGAGACCTACACCGAGGATGTTGCTGTTGAAATTGCCAAAGAGTTG
CAGGGCAAGCCTGATCTAATCATTGGAAACTACAGTGATGGCAACATTGT
TGCTTCCTTGTTAGCACATAAACTAGGTGTTACCCAGTGTACTATTGCTC
ATGCTTTGGAGAAAACAAAATATCCAGATTCTGACATCTACTGGAAAAAT
TTGGATGACAAATACCACTTCTCATGCCAATTTACAGCTGATCTTATAGC
CATGAATCACACTGACTTCATCATCACCAGTACCTTCCAAGAGATTGCTG
GAAGTAAGGACACTGTTGGTCAGTATGAGAGTCACACTGCTTTCACTCTT
CCTGGACTCTNACGTGTTGTACATGGTATTGATGTGTTTGN
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