CK935406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27_CANFA (60S ribosomal protein L27 OS=Canis familiaris GN=RPL27 PE=2 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 9.480e-23 Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 1 Query: 7 HCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EE++KTGKN+WFF KLRF Sbjct: 40 HALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEEKYKTGKNKWFFQKLRF 136
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27B_SCHPO (60S ribosomal protein L27-B OS=Schizosaccharomyces pombe GN=rpl27b PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.758e-22 Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = 1 Query: 4 GHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 GH +VAG+++YP KV + AK+ AK+SRVK F+K++NY HLMPTRY L++D LK +V+ + ++ A K K EE+++TGK+ WFFT LRF Sbjct: 39 GHAVVAGVERYPLKVTKSMGAKRIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEEKYQTGKSAWFFTPLRF 136
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27_CANAL (60S ribosomal protein L27 OS=Candida albicans GN=RPL27 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.603e-22 Identity = 50/97 (51.55%), Postives = 69/97 (71.13%), Query Frame = 1 Query: 7 HCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVD-LKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 H +VAGI++ P KV +K AKK K+++VK FVKLVNY HLMPTRY+LDV+ K V++++L+ ++ A K KK EE+ + GKN+WFF KL F Sbjct: 40 HAIVAGIERAPLKVTKKMDAKKVTKRTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKKAFEEKHQAGKNKWFFQKLHF 136
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27_CAEEL (60S ribosomal protein L27 OS=Caenorhabditis elegans GN=rpl-27 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.788e-21 Identity = 47/97 (48.45%), Postives = 70/97 (72.16%), Query Frame = 1 Query: 7 HCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 H ++AGI +YP KV + KK K++++K F+K+V+Y HL+PTRY++DV K ++ ++L++ KK A E K + EER+KTGKN+WFFTKLRF Sbjct: 40 HAIIAGIDRYPLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136
BLAST of CK935406 vs. ExPASy Swiss-Prot
Match: RL27_DICDI (60S ribosomal protein L27 OS=Dictyostelium discoideum GN=rpl27 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.416e-18 Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 4 GHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLD-------VDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 294 GHCLVAGI KYP ++R S K K++ +++FVK+VNY H+MPTRY + LK+ V+ +S Q K+ KK E + K GK++WFF+KLRF Sbjct: 42 GHCLVAGIDKYPRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVA-KRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144 The following BLAST results are available for this feature:
BLAST of CK935406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935406 ID=CK935406; Name=CK935406; organism=Citrus sinensis; type=EST; length=480bpback to top |