CK935408

Overview
NameCK935408
Unique NameCK935408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1813 contig Csv1_Contig1813:1..932. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A2_RABIT (Anion exchange protein 2 OS=Oryctolagus cuniculus GN=SLC4A2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.779e-16
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPI---AGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EVKEQR++ LL AL+VG  +    LL++IP +VL+G F +M + +L G QF+ER+ LL   P     V      T+++ V    +  FT  Q    LLC  + W  +   A + FP +++L VP+R  +L + F    ++ LDA E E
Sbjct: 1081 EVKEQRVTGLLVALLVGLSIVIGDLLRQIPLAVLFGIFLYMGVTSLNGIQFYERLHLLLMPPKHHPDV------TYVKKVRTLRMHLFTALQ----LLCLALLWAVMSTAASLAFPFILILTVPLRMVVLTRIFTEREMKCLDANEAE 1218          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A2_HORSE (Anion exchange protein 2 OS=Equus caballus GN=SLC4A2 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.779e-16
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPI---AGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EVKEQR++ LL AL+VG  +    LL++IP +VL+G F +M + +L G QF+ER+ LL   P     V      T+++ V    +  FT  Q    LLC  + W  +   A + FP +++L VP+R  +L + F    ++ LDA E E
Sbjct: 1081 EVKEQRVTGLLVALLVGLSIVIGDLLRQIPLAVLFGIFLYMGVTSLNGIQFYERLHLLLMPPKHHPDV------TYVKKVRTLRMHLFTALQ----LLCLALLWAVMSTAASLAFPFILILTVPLRMVVLTRIFTEREMKCLDANEAE 1218          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A2_RAT (Anion exchange protein 2 OS=Rattus norvegicus GN=Slc4a2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPI---AGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EVKEQR++ LL AL+VG  +    LL++IP +VL+G F +M + +L G QF+ER+ LL   P     V      T+++ V    +  FT  Q    LLC  + W  +   A + FP +++L VP+R  +L + F    ++ LDA E E
Sbjct: 1078 EVKEQRVTGLLVALLVGLSMVIGDLLRQIPLAVLFGIFLYMGVTSLNGIQFYERLHLLLMPPKHHPDV------TYVKKVRTMRMHLFTALQ----LLCLALLWAVMSTAASLAFPFILILTVPLRMVVLTRIFTEREMKCLDANEAE 1215          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A2_PONAB (Anion exchange protein 2 OS=Pongo abelii GN=SLC4A2 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPI---AGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EVKEQR++ LL AL+VG  +    LL++IP +VL+G F +M + +L G QF+ER+ LL   P     V      T+++ V    +  FT  Q    LLC  + W  +   A + FP +++L VP+R  +L + F    ++ LDA E E
Sbjct: 1083 EVKEQRVTGLLVALLVGLSIVIGDLLRQIPLAVLFGIFLYMGVTSLNGIQFYERLHLLLMPPKHHPDV------TYVKKVRTLRMHLFTALQ----LLCLALLWAVMSTAASLAFPFILILTVPLRMVVLTRIFTDREMKCLDANEAE 1220          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A2_MOUSE (Anion exchange protein 2 OS=Mus musculus GN=Slc4a2 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPI---AGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EVKEQR++ LL AL+VG  +    LL++IP +VL+G F +M + +L G QF+ER+ LL   P     V      T+++ V    +  FT  Q    LLC  + W  +   A + FP +++L VP+R  +L + F    ++ LDA E E
Sbjct: 1081 EVKEQRVTGLLVALLVGLSMVIGDLLRQIPLAVLFGIFLYMGVTSLNGIQFYERLHLLLMPPKHHPDV------TYVKKVRTMRMHLFTALQ----LLCLALLWAVMSTAASLAFPFILILTVPLRMVVLTRIFTEREMKCLDANEAE 1218          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A2_HUMAN (Anion exchange protein 2 OS=Homo sapiens GN=SLC4A2 PE=1 SV=4)

HSP 1 Score: 85.8853 bits (211), Expect = 3.629e-16
Identity = 54/148 (36.49%), Postives = 82/148 (55.41%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPI---AGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EVKEQR++ LL AL+VG  +    LL++IP +VL+G F +M + +L G QF+ER+ LL   P     V      T+++ V    +  FT  Q    LLC  + W  +   A + FP +++L VP+R  +L + F    ++ LDA E E
Sbjct: 1085 EVKEQRVTGLLVALLVGLSIVIGDLLRQIPLAVLFGIFLYMGVTSLNGIQFYERLHLLLMPPKHHPDV------TYVKKVRTLRMHLFTALQ----LLCLALLWAVMSTAASLAFPFILILTVPLRMVVLTRIFTDREMKCLDANEAE 1222          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A11_HUMAN (Sodium bicarbonate transporter-like protein 11 OS=Homo sapiens GN=SLC4A11 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.352e-15
Identity = 51/145 (35.17%), Postives = 86/145 (59.31%), Query Frame = 3
Query:   54 VEVKEQRLSNLLQALMVGGCVAAMPL-LKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLL--CFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDA 479
            V VKE RL++L  +++VG  +  +P+ L+ IP  VL+G F ++A+ +L GNQ  +R+ LL     +        H  +I  VP + I  FT  Q + LLL   FG++ +P   ++FPL+++ ++P+R  LLP+  +A +L  +DA
Sbjct:  749 VNVKETRLTSLGASVLVGLSLLLLPVPLQWIPKPVLYGLFLYIALTSLDGNQLVQRVALLL----KEQTAYPPTH--YIRRVPQRKIHYFTGLQVLQLLLLCAFGMSSLPYMKMIFPLIMIAMIPIRYILLPRIIEAKYLDVMDA 887          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A2_CAVPO (Anion exchange protein 2 OS=Cavia porcellus GN=SLC4A2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.012e-15
Identity = 52/148 (35.14%), Postives = 81/148 (54.73%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPI---AGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EVKEQR++ LL AL+VG  +    LL++IP +VL+G F +M + +L G QF+ER+ LL   P     V+      +++ V    +  F   Q    LLC  + W  +   A + FP +++L VP+R  +L + F    ++ LDA E E
Sbjct: 1082 EVKEQRVTGLLVALLVGLSLVIGDLLRQIPLAVLFGIFLYMGVTSLNGIQFYERLHLLLMPPKHHPDVM------YVKKVRTMRMHLFKALQ----LLCLALLWAVMSTAASLAFPFILILTVPLRMVVLTRIFTEREMKCLDANEAE 1219          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A3_RAT (Anion exchange protein 3 OS=Rattus norvegicus GN=Slc4a3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.240e-15
Identity = 51/148 (34.46%), Postives = 88/148 (59.46%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EV+EQR++ +L A +VG  +    +L++IP +VL+G F +M + +L G Q  +R+LL+F  P++ +   E+ + T ++T     +  FT  Q    L C  + W+    +A + FP L++L VP+R+ LLP+ F+   LQ LD+ + E
Sbjct: 1072 EVREQRVTGVLIASLVGLSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIF-MPAKHHP--EQPYVTKVKT---WRMHLFTFIQ----LGCIALLWVVKSTVASLAFPFLLLLTVPLRRCLLPRLFQDRELQALDSEDAE 1209          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A11_MOUSE (Sodium bicarbonate transporter-like protein 11 OS=Mus musculus GN=Slc4a11 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.939e-15
Identity = 51/145 (35.17%), Postives = 85/145 (58.62%), Query Frame = 3
Query:   54 VEVKEQRLSNLLQALMVGGCVAAMPL-LKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLL--CFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDA 479
            V+VKE RL+ L  +++VG  +  +P  L+ IP  VL+G F ++A+ +L GNQ + R+ LL     +        H  +I  VP + I  FT  Q + LLL   FG++ +P   ++FPL+++ ++P+R  LLP+  +A +L  +DA
Sbjct:  720 VDVKETRLTALGASVLVGLSLLLLPFPLQWIPKPVLYGLFLYIALTSLDGNQLFSRVALLL----KEQTSYPPTH--YIRRVPQRKIHYFTGLQILQLLLLCAFGMSSLPYMKMVFPLIMIAMIPIRYNLLPRIIEAKYLDVMDA 858          
The following BLAST results are available for this feature:
BLAST of CK935408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
B3A2_RABIT2.779e-1636.49Anion exchange protein 2 OS=Oryctolagus cuniculus ... [more]
B3A2_HORSE2.779e-1636.49Anion exchange protein 2 OS=Equus caballus GN=SLC4... [more]
B3A2_RAT3.629e-1636.49Anion exchange protein 2 OS=Rattus norvegicus GN=S... [more]
B3A2_PONAB3.629e-1636.49Anion exchange protein 2 OS=Pongo abelii GN=SLC4A2... [more]
B3A2_MOUSE3.629e-1636.49Anion exchange protein 2 OS=Mus musculus GN=Slc4a2... [more]
B3A2_HUMAN3.629e-1636.49Anion exchange protein 2 OS=Homo sapiens GN=SLC4A2... [more]
S4A11_HUMAN2.352e-1535.17Sodium bicarbonate transporter-like protein 11 OS=... [more]
B3A2_CAVPO4.012e-1535.14Anion exchange protein 2 OS=Cavia porcellus GN=SLC... [more]
B3A3_RAT5.240e-1534.46Anion exchange protein 3 OS=Rattus norvegicus GN=S... [more]
S4A11_MOUSE8.939e-1535.17Sodium bicarbonate transporter-like protein 11 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_A09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935408 ID=CK935408; Name=CK935408; organism=Citrus sinensis; type=EST; length=932bp
GGGTTGATGAGACTGTTTTTGATGTGGATAAGGATATTGATGATCTTTTA
CCTGTTGAAGTCAAGGAACAACGTCTCAGCAATCTGCTGCAGGCATTGAT
GGTTGGCGGTTGTGTTGCTGCTATGCCTCTCCTGAAGAAGATCCCTACTT
CTGTTCTTTGGGGCTACTTTGCCTTCATGGCCATTGAGAACTTGCCTGGA
AATCAATTTTGGGAGAGGATATTATTGCTTTTCACTGCTCCAAGCCGCAG
ATACAAGGTTTTGGAGGAGAATCATGCAACATTCATTGAGACTGTTCCCT
TCAAATCAATTGCTGCCTTTACTTTGTTCCAGACAGTCTACCTGCTTCTT
TGCTTTGGCATAACATGGATTCCCATAGCTGGCGTCCTTTTCCCACTGTT
GATCATGCTTCTTGTCCCTGTGCGGCAATATTTGCTCCCAAAGTTTTTCA
AAGCTGTTCATCTTCAAGATTTGGATGCTGCAGAATATGAGGAAGCTCCT
GCCATTTCTTACAATATGACATTTGAAGAAAGAGCCATCGACATTGATGG
AGGGGAAATTTTAGATGAAATGATCACACGAAGCCGTGGTGAGATTCGCC
ACTCACAGAGTCCTAAAATTACTAGTTCAACTCCAACTTCACTTGAGGAT
AAAAGATCTCCTCACAGTCCATCGATGCAAAGGGCATATAGTCCCCGTGT
TAGAGAACTGAGGGTGGAAAGAAGCCCCAGCTTGAGCGGAAAAGGGCTAG
AAGTAAAGAAAGTTCCCAGTCCCGGGCCATCTAACCTTGGACAAAGCAGT
AACGGTTCATCTCCATGCTAAAGTCTTGAATGCATAATCCACATGAGTTT
ATTTGTCAATGGTGCTCGAGAGGTCTTGTACTAAGTTCATNNNACTACGT
GTTAGATGTGCTTCTCTTCCTATTTCTAACCA
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