CK935408

Overview
NameCK935408
Unique NameCK935408
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1813 contig Csv1_Contig1813:1..932. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A3_RABIT (Anion exchange protein 3 OS=Oryctolagus cuniculus GN=SLC4A3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.436e-14
Identity = 50/148 (33.78%), Postives = 86/148 (58.11%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EV+EQR++ +L A +VG  +    +L++IP +VL+G F +M + +L G Q  +R+LL+   P++ +   E+ + T ++T     +  FT  Q    L C  + W+     A + FP L++L VP+R+ LLP+ F+   LQ LD+ + E
Sbjct: 1078 EVREQRVTGVLIASLVGLSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIL-MPAKHHP--EQPYVTKVKT---WRMHLFTCIQ----LACIALLWVVKSTAASLAFPFLLLLTVPLRRCLLPRLFQDRELQALDSEDAE 1215          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A5_RAT (Electrogenic sodium bicarbonate cotransporter 4 OS=Rattus norvegicus GN=Slc4a5 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.567e-14
Identity = 47/128 (36.72%), Postives = 76/128 (59.38%), Query Frame = 3
Query:   60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYL 434
            V+EQR++ ++  ++ G  V   P+LK IP  VL+G F +M + +L G QFW+R   LF  P++     + +HA F+  VP + I  FTL Q    +LC  + WI    +A ++FP++I+ L+ VR+ L
Sbjct:  916 VREQRVTGVMVFILTGISVFLAPILKYIPMPVLYGVFLYMGVASLNGIQFWDR-CKLFLMPAKH----QPDHA-FLRHVPLRRIHLFTLVQ----ILCLALLWILKSTMAAIIFPVMILGLIIVRRLL 1033          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A3_MOUSE (Anion exchange protein 3 OS=Mus musculus GN=Slc4a3 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.883e-14
Identity = 51/148 (34.46%), Postives = 85/148 (57.43%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EV+EQR++ +L A +VG  +    +L++IP +VL+G F +M + +L G Q  +R+LL+F  P++ +   E+ + T ++T     I  FT  Q    L C  + W+     A + FP L++L VP+   LLP+ F+   LQ LD+ + E
Sbjct: 1072 EVREQRVTGVLIASLVGLSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIF-MPAKHHP--EQPYVTKVKT---WRIDLFTCIQ----LGCIALLWVVKSTAASLAFPFLLLLTVPLSGCLLPRLFQDRELQALDSEDAE 1209          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A3_HUMAN (Anion exchange protein 3 OS=Homo sapiens GN=SLC4A3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.291e-13
Identity = 50/148 (33.78%), Postives = 85/148 (57.43%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EV+EQR++ +L A +VG  +    +L++IP +VL+G F +M + +L G Q  +R+LL+   P++ +   E+ + T ++T     +  FT  Q    L C  + W+     A + FP L++L VP+R  LLP+ F+   LQ LD+ + E
Sbjct: 1077 EVREQRVTGVLIASLVGLSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIL-MPAKHHP--EQPYVTKVKT---WRMHLFTCIQ----LGCIALLWVVKSTAASLAFPFLLLLTVPLRHCLLPRLFQDRELQALDSEDAE 1214          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A3_CALMO (Anion exchange protein 3 OS=Callicebus moloch GN=SLC4A3 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.291e-13
Identity = 50/148 (33.78%), Postives = 85/148 (57.43%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EV+EQR++ +L A +VG  +    +L++IP +VL+G F +M + +L G Q  +R+LL+   P++ +   E+ + T ++T     +  FT  Q    L C  + W+     A + FP L++L VP+R  LLP+ F+   LQ LD+ + E
Sbjct: 1077 EVREQRVTGVLIASLVGLSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIL-MPAKHHP--EQPYVTKVKT---WRMHLFTCIQ----LGCIALLWVVKSTAASLAFPFLLLLTVPLRHCLLPRLFQDRELQALDSEDAE 1214          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3AT_ONCMY (Band 3 anion exchange protein OS=Oncorhynchus mykiss GN=slc4a1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.905e-13
Identity = 49/155 (31.61%), Postives = 79/155 (50.97%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITW---IPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAE----YEEAP 500
            +V EQR+S +L A MVG  +   P+LK IP + L+G F +M I +L G Q W+R+LLL   P + Y         + + V    +  FTL Q    ++C G  W   +    +  P +++L +P+R  +    F    ++ LDA++    +EE P
Sbjct:  764 KVLEQRISGMLVAAMVGVSILLEPILKMIPMTALFGIFLYMGITSLSGIQMWDRMLLLI-VPRKYYPA-----DAYAQRVTTMKMHLFTLIQ----MVCLGALWMVKMSAFSLALPFVLILTIPLRMAITGTLFTDKEMKCLDASDGKVKFEEEP 908          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A3_PONAB (Anion exchange protein 3 OS=Pongo abelii GN=SLC4A3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.406e-13
Identity = 49/148 (33.11%), Postives = 84/148 (56.76%), Query Frame = 3
Query:   57 EVKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYE 491
            EV+EQR++ +L A +VG  +    +L++IP +VL+G F +M + +L G Q  +R+LL+   P++ +   E+ + T ++T     +  F   Q    L C  + W+     A + FP L++L VP+R  LLP+ F+   LQ LD+ + E
Sbjct: 1077 EVREQRVTGVLIASLVGLSIVMGAVLRRIPLAVLFGIFLYMGVTSLSGIQLSQRLLLIL-MPAKHHP--EQPYVTKVKT---WRMHLFICIQ----LGCIALLWVVKSTAASLAFPFLLLLTVPLRHCLLPRLFQDRELQALDSEDAE 1214          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A4_AMBTI (Electrogenic sodium bicarbonate cotransporter 1 OS=Ambystoma tigrinum GN=SLC4A4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.434e-12
Identity = 47/142 (33.10%), Postives = 74/142 (52.11%), Query Frame = 3
Query:   60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLD 476
            V+EQR++  +  L+ G  V   P+LK IP  VL+G F +M + +L G QF +R+ LL   P  +   +      ++  VP + +  FT  Q V    C  + WI    +A ++FP++I+ LV VR+  +  FF    L  LD
Sbjct:  829 VREQRVTGTVVFLLTGLSVFMAPILKFIPMPVLYGVFLYMGVASLNGVQFMDRLKLLLMPPKYQPDFI------YLRHVPLRRVHLFTFLQVV----CLAMLWILKSTVAAIIFPVMILALVAVRK-AMDYFFSQHDLSFLD 959          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A5_HUMAN (Electrogenic sodium bicarbonate cotransporter 4 OS=Homo sapiens GN=SLC4A5 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.061e-11
Identity = 48/144 (33.33%), Postives = 76/144 (52.78%), Query Frame = 3
Query:   60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQ----------------FWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYL 434
            V+EQR++ ++  ++ G  V   P+LK IP  VL+G F +M + +L G Q                FWER   LF  P++     + +HA F+  VP + I  FTL Q    +LC  + WI    +A ++FP++I+ L+ VR+ L
Sbjct:  924 VREQRVTGIIVFILTGISVFLAPILKCIPLPVLYGVFLYMGVASLNGIQMGTGGSEFKIQKKLTPFWER-CKLFLMPAKH----QPDHA-FLRHVPLRRIHLFTLVQ----ILCLAVLWILKSTVAAIIFPVMILGLIIVRRLL 1057          
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A4_RABIT (Electrogenic sodium bicarbonate cotransporter 1 OS=Oryctolagus cuniculus GN=SLC4A4 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11
Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 3
Query:   60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQ 428
            V+EQR++  L  ++ G  V   P+LK IP  VL+G F +M + +L G QF +R+ LL         +  +    ++  VP + +  FT  Q    +LC  + WI    +A ++FP++I+ LV VR+
Sbjct:  873 VREQRVTGTLVFILTGLSVFMAPILKFIPMPVLYGVFLYMGVASLNGVQFMDRLKLLL------MPLKHQPDFIYLRHVPLRRVHLFTFLQ----VLCLALLWILKSTVAAIIFPVMILALVAVRK 988          
The following BLAST results are available for this feature:
BLAST of CK935408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
B3A3_RABIT4.436e-1433.78Anion exchange protein 3 OS=Oryctolagus cuniculus ... [more]
S4A5_RAT7.567e-1436.72Electrogenic sodium bicarbonate cotransporter 4 OS... [more]
B3A3_MOUSE9.883e-1434.46Anion exchange protein 3 OS=Mus musculus GN=Slc4a3... [more]
B3A3_HUMAN1.291e-1333.78Anion exchange protein 3 OS=Homo sapiens GN=SLC4A3... [more]
B3A3_CALMO1.291e-1333.78Anion exchange protein 3 OS=Callicebus moloch GN=S... [more]
B3AT_ONCMY4.905e-1331.61Band 3 anion exchange protein OS=Oncorhynchus myki... [more]
B3A3_PONAB6.406e-1333.11Anion exchange protein 3 OS=Pongo abelii GN=SLC4A3... [more]
S4A4_AMBTI2.434e-1233.10Electrogenic sodium bicarbonate cotransporter 1 OS... [more]
S4A5_HUMAN2.061e-1133.33Electrogenic sodium bicarbonate cotransporter 4 OS... [more]
S4A4_RABIT2.691e-1132.54Electrogenic sodium bicarbonate cotransporter 1 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_A09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935408 ID=CK935408; Name=CK935408; organism=Citrus sinensis; type=EST; length=932bp
GGGTTGATGAGACTGTTTTTGATGTGGATAAGGATATTGATGATCTTTTA
CCTGTTGAAGTCAAGGAACAACGTCTCAGCAATCTGCTGCAGGCATTGAT
GGTTGGCGGTTGTGTTGCTGCTATGCCTCTCCTGAAGAAGATCCCTACTT
CTGTTCTTTGGGGCTACTTTGCCTTCATGGCCATTGAGAACTTGCCTGGA
AATCAATTTTGGGAGAGGATATTATTGCTTTTCACTGCTCCAAGCCGCAG
ATACAAGGTTTTGGAGGAGAATCATGCAACATTCATTGAGACTGTTCCCT
TCAAATCAATTGCTGCCTTTACTTTGTTCCAGACAGTCTACCTGCTTCTT
TGCTTTGGCATAACATGGATTCCCATAGCTGGCGTCCTTTTCCCACTGTT
GATCATGCTTCTTGTCCCTGTGCGGCAATATTTGCTCCCAAAGTTTTTCA
AAGCTGTTCATCTTCAAGATTTGGATGCTGCAGAATATGAGGAAGCTCCT
GCCATTTCTTACAATATGACATTTGAAGAAAGAGCCATCGACATTGATGG
AGGGGAAATTTTAGATGAAATGATCACACGAAGCCGTGGTGAGATTCGCC
ACTCACAGAGTCCTAAAATTACTAGTTCAACTCCAACTTCACTTGAGGAT
AAAAGATCTCCTCACAGTCCATCGATGCAAAGGGCATATAGTCCCCGTGT
TAGAGAACTGAGGGTGGAAAGAAGCCCCAGCTTGAGCGGAAAAGGGCTAG
AAGTAAAGAAAGTTCCCAGTCCCGGGCCATCTAACCTTGGACAAAGCAGT
AACGGTTCATCTCCATGCTAAAGTCTTGAATGCATAATCCACATGAGTTT
ATTTGTCAATGGTGCTCGAGAGGTCTTGTACTAAGTTCATNNNACTACGT
GTTAGATGTGCTTCTCTTCCTATTTCTAACCA
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