CK935408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A4_PIG (Electrogenic sodium bicarbonate cotransporter 1 OS=Sus scrofa GN=SLC4A4 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQ 428 V+EQR++ L ++ G V P+LK IP VL+G F +M + +L G QF +R+ LL + + ++ VP + + FT Q +LC + WI +A ++FP++I+ LV VR+ Sbjct: 873 VREQRVTGTLVFILTGLSVFMAPILKFIPMPVLYGVFLYMGVASLNGVQFMDRLKLLL------MPLKHQPDFIYLRHVPLRRVHLFTFLQ----VLCLALLWILKSTVAAIIFPVMILALVAVRK 988
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A4_MOUSE (Electrogenic sodium bicarbonate cotransporter 1 OS=Mus musculus GN=Slc4a4 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQ 428 V+EQR++ L ++ G V P+LK IP VL+G F +M + +L G QF +R+ LL + + ++ VP + + FT Q +LC + WI +A ++FP++I+ LV VR+ Sbjct: 873 VREQRVTGTLVFILTGLSVFMAPILKFIPMPVLYGVFLYMGVASLNGVQFMDRLKLLL------MPLKHQPDFIYLRHVPLRRVHLFTFLQ----VLCLALLWILKSTVAAIIFPVMILALVAVRK 988
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A4_HUMAN (Electrogenic sodium bicarbonate cotransporter 1 OS=Homo sapiens GN=SLC4A4 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQ 428 V+EQR++ L ++ G V P+LK IP VL+G F +M + +L G QF +R+ LL + + ++ VP + + FT Q +LC + WI +A ++FP++I+ LV VR+ Sbjct: 873 VREQRVTGTLVFILTGLSVFMAPILKFIPMPVLYGVFLYMGVASLNGVQFMDRLKLLL------MPLKHQPDFIYLRHVPLRRVHLFTFLQ----VLCLALLWILKSTVAAIIFPVMILALVAVRK 988
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A4_BOVIN (Electrogenic sodium bicarbonate cotransporter 1 OS=Bos taurus GN=SLC4A4 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQ 428 V+EQR++ L ++ G V P+LK IP VL+G F +M + +L G QF +R+ LL + + ++ VP + + FT Q +LC + WI +A ++FP++I+ LV VR+ Sbjct: 873 VREQRVTGTLVFILTGLSVFMAPILKFIPMPVLYGVFLYMGVASLNGVQFMDRLKLLL------MPLKHQPDFIYLRHVPLRRVHLFTFLQ----VLCLALLWILKSTVAAIIFPVMILALVAVRK 988
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A4_HUMAN (Anion exchange protein 4 OS=Homo sapiens GN=SLC4A9 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.515e-11 Identity = 50/152 (32.89%), Postives = 74/152 (48.68%), Query Frame = 3 Query: 60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPAI 506 ++EQRL+ L+ ++ G + P+LK IP VL+G F +M + L QF R+ LL + +L H VP + FT Q L C G+ WI A ++FPL+++ LV VR+ L + F L LD EE +I Sbjct: 808 IREQRLTGLVVFILTGASIFLAPVLKFIPMPVLYGIFLYMGVAALSSIQFTNRVKLLLMPAKHQPDLLLLRH------VPLTRVHLFTAIQ----LACLGLLWIIKSTPAAIIFPLMLLGLVGVRK-ALERVFSPQELLWLDELMPEEERSI 948
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A4_RAT (Electrogenic sodium bicarbonate cotransporter 1 OS=Rattus norvegicus GN=Slc4a4 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 3 Query: 60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQ 428 V+EQR++ L ++ G V P+LK IP VL+G F +M + +L G QF +R+ LL + + ++ VP + + FT Q +LC + WI +A ++FP++I+ LV VR+ Sbjct: 873 VREQRVTGTLVFILTGLSVFMAPILKFIPMPVLYGVFLYMGVASLNGVQFMDRLKLLL------MPLKHQPDFIYLRHVPLRRVHLFTSLQ----VLCLALLWILKSTVAAIIFPVMILALVAVRK 988
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: B3A4_RAT (Anion exchange protein 4 OS=Rattus norvegicus GN=Slc4a9 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.591e-11 Identity = 57/185 (30.81%), Postives = 82/185 (44.32%), Query Frame = 3 Query: 60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPAISYNMTFEERAIDIDGGEILDEMITRSRGEIRHS 605 ++EQRL+ L+ ++ G + P+LK IP VL+G F +M + L QF +R+ LL + VL H VP + FT Q L C G+ W+ A ++FPL+++ LV VR+ L F L LD EE I N E + E + M EI S Sbjct: 778 IREQRLTGLVVFILTGVSIFLAPVLKFIPMPVLYGIFLYMGVAALSSMQFMKRVQLLLMPRKHQPDVLLLRH------VPLIRVHLFTAIQ----LACLGLLWVIKSTPAAIVFPLMLLGLVAVRK-ALEWIFSPQELLWLDELMPEEEKTIPENRPEPEHLFSGNDSENSELMYQPKAPEINIS 951
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A10_HUMAN (Sodium-driven chloride bicarbonate exchanger OS=Homo sapiens GN=SLC4A10 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.996e-11 Identity = 45/142 (31.69%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWI---PIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLD 476 ++EQR++ L+ +++G V +LK IP VL+G F +M +L G QF++RI LF P++ + ++ VP + + FT+ Q + C G+ WI A ++FP++++ LV VR+ L+ F L LD Sbjct: 906 IREQRVTGLMIFILMGSSVFMTSILKFIPMPVLYGVFLYMGASSLKGIQFFDRI-KLFWMPAK-----HQPDFIYLRHVPLRKVHLFTIIQ----MSCLGLLWIIKVSRAAIVFPMMVLALVFVRK-LMDLLFTKRELSWLD 1036
BLAST of CK935408 vs. ExPASy Swiss-Prot
Match: S4A8_HUMAN (Electroneutral sodium bicarbonate exchanger 1 OS=Homo sapiens GN=SLC4A8 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11 Identity = 41/125 (32.80%), Postives = 73/125 (58.40%), Query Frame = 3 Query: 60 VKEQRLSNLLQALMVGGCVAAMPLLKKIPTSVLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYL 434 ++EQR++ L+ +++G V +LK IP VL+G F +M + +L G QF++R L LF P++ + ++ VP + + FTL Q L+L + I P A ++FP++++ LV VR+ + Sbjct: 875 IREQRVTGLMIFVLMGCSVFMTAILKFIPMPVLYGVFLYMGVSSLQGIQFFDR-LKLFGMPAK-----HQPDFIYLRHVPLRKVHLFTLIQLTCLVLLWVIKASP-AAIVFPMMVLALVFVRKVM 992 The following BLAST results are available for this feature:
BLAST of CK935408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935408 ID=CK935408; Name=CK935408; organism=Citrus sinensis; type=EST; length=932bpback to top |