CK935409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935409 vs. ExPASy Swiss-Prot
Match: H2A_SEPOF (Histone H2A OS=Sepia officinalis PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 67/105 (63.81%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 185 SRSVKAGPQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 499 +RS +AG QFPVGRI R L+KG Y+QRVG GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 16 TRSSRAGLQFPVGRIHRLLRKGNYAQRVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK935409 vs. ExPASy Swiss-Prot
Match: H2A_PARLI (Histone H2A OS=Paracentrotus lividus PE=3 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 67/105 (63.81%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 185 SRSVKAGPQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 499 SRS +AG QFPVGR+ R+L+KG Y++RVG GAP GNAARDNKK+RIIPRH+ LAVRNDEEL KLL GVTIA GGVLPNI VLLPKK+ Sbjct: 16 SRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK935409 vs. ExPASy Swiss-Prot
Match: H2A_MYTGA (Histone H2A OS=Mytilus galloprovincialis PE=3 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 67/105 (63.81%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 185 SRSVKAGPQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 499 SRS +AG QFPVGRI R L+KG Y++RVG GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK935409 vs. ExPASy Swiss-Prot
Match: H2A_MYTED (Histone H2A OS=Mytilus edulis PE=3 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 67/105 (63.81%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 185 SRSVKAGPQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 499 SRS +AG QFPVGRI R L+KG Y++RVG GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK935409 vs. ExPASy Swiss-Prot
Match: H2A_MYTCH (Histone H2A OS=Mytilus chilensis PE=3 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 67/105 (63.81%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 185 SRSVKAGPQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 499 SRS +AG QFPVGRI R L+KG Y++RVG GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK935409 vs. ExPASy Swiss-Prot
Match: H2A_MYTCA (Histone H2A OS=Mytilus californianus PE=3 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 67/105 (63.81%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 185 SRSVKAGPQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 499 SRS +AG QFPVGRI R L+KG Y++RVG GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL+GVTIA GGVLPNI VLLPKK+ Sbjct: 16 SRSSRAGLQFPVGRIHRLLRKGNYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKT 120
BLAST of CK935409 vs. ExPASy Swiss-Prot
Match: H2AX_MOUSE (Histone H2A.x OS=Mus musculus GN=H2afx PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 67/105 (63.81%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 185 SRSVKAGPQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 499 SRS +AG QFPVGR+ R L+KG Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL GVTIA GGVLPNI VLLPKKS Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKS 121
BLAST of CK935409 vs. ExPASy Swiss-Prot
Match: H2AX_CICAR (Histone H2AX OS=Cicer arietinum GN=HIS2A PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 66/104 (63.46%), Postives = 74/104 (71.15%), Query Frame = 2 Query: 185 SRSVKAGPQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 496 SRS KAG QFPVGRI R+LK G+Y++RVG GAP GNAARDNK NRI+PRH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLPKK Sbjct: 21 SRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 124
BLAST of CK935409 vs. ExPASy Swiss-Prot
Match: H2A4_PSAMI (Late histone H2A.2.2 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 67/104 (64.42%), Postives = 74/104 (71.15%), Query Frame = 2 Query: 185 SRSVKAGPQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 496 SRS +AG QFPVGR+ R+L+KG Y+ RVG GAP GNAARDNKK+RIIPRH+ LAVRNDEEL KLL GVTIA GGVLPNI VLLPKK Sbjct: 16 SRSSRAGLQFPVGRVHRFLRKGNYANRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 119
BLAST of CK935409 vs. ExPASy Swiss-Prot
Match: H2A1_PSAMI (Late histone H2A.1 OS=Psammechinus miliaris PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 67/105 (63.81%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 185 SRSVKAGPQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 499 +RS +AG QFPVGR+ R+LKKG Y RVG GAP GNAARDNKK+RIIPRH+ LAVRNDEEL KLL GVTIA GGVLPNI VLLPKK+ Sbjct: 16 TRSSRAGLQFPVGRVHRFLKKGNYGSRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKT 120 The following BLAST results are available for this feature:
BLAST of CK935409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 237
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935409 ID=CK935409; Name=CK935409; organism=Citrus sinensis; type=EST; length=742bpback to top |