CK935411

Overview
NameCK935411
Unique NameCK935411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_STRA1 (Adenylate kinase OS=Streptococcus agalactiae serotype Ia GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 67/213 (31.46%), Postives = 104/213 (48.83%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES--GNDKFLIDGFPRNEENRAAFEAV-------------TKIEPEFVLFFDCSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAVFTPK 753
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E G + ++ I +G++VP EVT  ++++ + E       FL+DG+PR  E   A +A               K++P       C  E +  RI+NR  G                    REDD  ET+++R  V +     ++++Y   G V  I+  + + EVF D  KA+   K
Sbjct:    6 MGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDP------SCLIERLSGRIINRKTGETFHKVFNPPVDYKEEDYYQREDDKPETVKRRLDVNIAQGESILEHYRKLGLVTDIEGNQEITEVFADVEKALLELK 212          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_STAES (Adenylate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 62/203 (30.54%), Postives = 106/203 (52.22%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKIEPEF--VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 732
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  ++ G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  ++  +  + +++++ E   V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P+++YY  KG ++ ID +K + EV + V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIDQAESLSQIMSELDREIDAVINIEVPEEELMNRLTGRRICEKCGTTYHLVFNPPKVDGICDIDGGKLYQREDDNPETVSNRLSVNVKQSKPILEYYNNKGVLKNIDGSKDIDEVTNDV 208          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_STAEQ (Adenylate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 62/203 (30.54%), Postives = 106/203 (52.22%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKIEPEF--VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 732
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  ++ G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  ++  +  + +++++ E   V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P+++YY  KG ++ ID +K + EV + V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKDETDLGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIDQAESLSQIMSELDREIDAVINIEVPEEELMNRLTGRRICEKCGTTYHLVFNPPKVDGICDIDGGKLYQREDDNPETVSNRLSVNVKQSKPILEYYNNKGVLKNIDGSKDIDEVTNDV 208          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_STAAW (Adenylate kinase OS=Staphylococcus aureus (strain MW2) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 64/202 (31.68%), Postives = 101/202 (50.00%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 720
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_STAAS (Adenylate kinase OS=Staphylococcus aureus (strain MSSA476) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 64/202 (31.68%), Postives = 101/202 (50.00%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 720
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_STAAR (Adenylate kinase OS=Staphylococcus aureus (strain MRSA252) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 64/202 (31.68%), Postives = 101/202 (50.00%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 720
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_STAAN (Adenylate kinase OS=Staphylococcus aureus (strain N315) GN=adk PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 64/202 (31.68%), Postives = 101/202 (50.00%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 720
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_STAAM (Adenylate kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=adk PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 64/202 (31.68%), Postives = 101/202 (50.00%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 720
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_STAAC (Adenylate kinase OS=Staphylococcus aureus (strain COL) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 64/202 (31.68%), Postives = 101/202 (50.00%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 720
            +G PG+GKGTQ + IV+ F   H+S GD+ R  IK  +E G   ++ +  G++VP EVT+ ++++ + E    K FL+DGFPR  E     EA+  I  E       V+  +  EEE+  R+  R                                REDDN ET+  R  V ++ S P++ +Y+ KG ++ ID +K +++V
Sbjct:    6 MGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQA---EALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDV 204          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_LEUMM (Adenylate kinase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.265e-21
Identity = 58/177 (32.77%), Postives = 94/177 (53.11%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 741
            LG PG+GKGTQ   IV+ +   H+S GD+ RA +   +E G   +  +  G +VP E+T  ++   + +   +  F++DG+PRNE      +       + V   L+F+ ++  +  R+L R  GR DD  E I  R  V   ++LP+V YY+  G +  ID  + +A+V+  VK V
Sbjct:    8 LGLPGAGKGTQADFIVKDYSIVHISTGDIFRANLAENTELGQKARQFMDAGDLVPDEITNAMVADRLNQQDVETGFMLDGYPRNEAQAVFLDKYLSDNGKSVSATLYFEVADTLLRERLLGR--GRADDTPEVIDNRLAVNKAANLPLVDYYQKAGVLHTIDGGRELADVYHDVKEV 182          
The following BLAST results are available for this feature:
BLAST of CK935411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_STRA12.265e-2131.46Adenylate kinase OS=Streptococcus agalactiae serot... [more]
KAD_STAES2.265e-2130.54Adenylate kinase OS=Staphylococcus epidermidis (st... [more]
KAD_STAEQ2.265e-2130.54Adenylate kinase OS=Staphylococcus epidermidis (st... [more]
KAD_STAAW2.265e-2131.68Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAS2.265e-2131.68Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAR2.265e-2131.68Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAN2.265e-2131.68Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAM2.265e-2131.68Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_STAAC2.265e-2131.68Adenylate kinase OS=Staphylococcus aureus (strain ... [more]
KAD_LEUMM2.265e-2132.77Adenylate kinase OS=Leuconostoc mesenteroides subs... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004562_A12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935411 ID=CK935411; Name=CK935411; organism=Citrus sinensis; type=EST; length=948bp
GGGGACAACAACAAAAAACTAACATTGGCAATTGGCATCCCTCTGCCTTC
TTTCTTTCCCTCCATATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCG
CAATTCGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGA
ACTGTGGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAA
GAAGCCCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGTGGAAAAGGAA
CCCAGTGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCT
GGTGATCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCAT
GATTCAGAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAA
TAAAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTC
ATCGATGGTTTTCCCAGAAACGAGGAAAATCGTGCTGCATTTGAAGCTGT
TACCAAAATTGAGCCAGAATTCGTTCTGTTTTTTGACTGTTCTGAGGAGG
AGATGGAGAGGCGCATTTTGAATAGGAATCAGGGAAGAGAAGATGATAAC
GTTGAGACAATTAGGAAGCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCC
TGTGGTTCAATATTATGAAGCTAAGGGTAAAGTTCGGAAGATTGATGCTG
CAAAGCCTGTTGCAGAGGTTTTTGATGCTGTTAAAGCTGTTTTTACCCCA
AAAGATGAGAAGGCTGCTGCTTGGGTCTTCTCTGTCCAGAGTATCAGATT
TAATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTATTATTGTACTT
TATTATTATGAGGTTATTATGCCACATGTTTTACTAGAATGTCATAGAAG
TTCATAGTGTATCATGATATTTATTCTTGTTTGCCTATGTATTCTTGT
back to top