CK935411

Overview
NameCK935411
Unique NameCK935411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length948
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935411_ssr71 microsatellite CK935411_ssr71:71..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1814 contig Csv1_Contig1814:1..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_PROAC (Adenylate kinase OS=Propionibacterium acnes GN=adk PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.419e-23
Identity = 61/184 (33.15%), Postives = 101/184 (54.89%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKL-LQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRN--QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPKD 756
            +G PG+GKGTQ   I EH+    +S GD+ R  IK+G+E G  ++ ++  G +VP E+T  + + +  ++   + FL+DG+PRN     A +A  K      + V+  D   E + +R+L R   +GR DDN ETIR R KV+   + P++++Y + G +  +D    + EV   + A    K+
Sbjct:    6 MGAPGAGKGTQATAIAEHYSVPAISTGDMFRTNIKNGTELGKKVKAIMDAGDLVPDELTDAIVVDRLNQDDAANGFLLDGYPRNMHQVEALDAYLKEHGQRLDAVISLDVDPELLTQRLLKRAEIEGRTDDNEETIRNRMKVYSSQTEPLLEHYRSAGILVPVDGVGEIDEVRQRIFAALDSKN 189          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_PORGI (Adenylate kinase OS=Porphyromonas gingivalis GN=adk PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.419e-23
Identity = 59/171 (34.50%), Postives = 92/171 (53.80%), Query Frame = 1
Query:  226 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 720
            G PGSGKGTQ   ++  +G+ H+S G+LLRAEIK+ +E G      I EG +VP  + + +++K +      +  + DGFPR      A E +      + + VL     EE +  R+LNR +  GR DDN+ETIRKR  V+   + P+V ++  K  +  +     + E+
Sbjct:    8 GAPGSGKGTQSEELIRRYGFRHISTGELLRAEIKAQTELGQAAAGYINEGHLVPDSLIVDMMEKLISTLVDTEGIIFDGFPRTIPQAEAMETMLAHHGWKVDIVLNLQVPEEMLIERLLNRGKVSGRSDDNIETIRKRLDVYANETAPLVDFFTRKNVLHNVVGTGTIEEI 178          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_PORG3 (Adenylate kinase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=adk PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.419e-23
Identity = 59/171 (34.50%), Postives = 92/171 (53.80%), Query Frame = 1
Query:  226 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 720
            G PGSGKGTQ   ++  +G+ H+S G+LLRAEIK+ +E G      I EG +VP  + + +++K +      +  + DGFPR      A E +      + + VL     EE +  R+LNR +  GR DDN+ETIRKR  V+   + P+V ++  K  +  +     + E+
Sbjct:    8 GAPGSGKGTQSEELIRRYGFRHISTGELLRAEIKAQTELGQAAAGYINEGHLVPDSLIVDMMEKLISTLVDTEGIIFDGFPRTIPQAEAMETMLAHHGWKVDIVLNLQVPEEMLIERLLNRGKISGRSDDNIETIRKRLDVYANETAPLVDFFTRKNVLHNVVGTGTIEEI 178          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_NITSB (Adenylate kinase OS=Nitratiruptor sp. (strain SB155-2) GN=adk PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.419e-23
Identity = 66/188 (35.11%), Postives = 100/188 (53.19%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFG--YTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEP----EFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTPK-DEKA 765
            +G PGSGK T    I +       H S GDLLR E+K G+  G  I + I  G++VP E+ +  ++ A+  S  +  +IDGFPR+ E   A + + +  P    E V+    SEE    R+L R +G  DDNVE    R K++LE    + ++YE KG ++KID  + + E+   +++    K DE A
Sbjct:    8 IGAPGSGKTTDAEIIAKKHSDLIAHYSTGDLLREEVKKGTPLGATIASFIDNGQLVPLEIVMDTIKNAILNSDKEVIIIDGFPRSVEQMEALDKMLQENPSIKLEAVIEVVVSEETARERVLGRARG-ADDNVEVFNNRMKLYLEPLNQIEEFYEKKGLLKKIDGERTIEEIVADMESFILQKIDENA 194          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_EUBR3 (Adenylate kinase OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=adk PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.419e-23
Identity = 64/206 (31.07%), Postives = 109/206 (52.91%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKL-LQKAMEESGNDKFLIDGFPRN-EENRAAFEAVTKI--EPEFVLFFDCSEEEMERRILNR----NQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 741
            LG PG+GKGTQ   I   +   H+S GD+ RA IK+G+E G   +  + +G +VP E+T  L + +  ++   + F++DGFPR   + +A  +A+TKI  + ++ +  D  +E +  R+  R    N G                         R+DD  ET++KR  V+ E + P+++YY+ +G ++ +D  KP+ EVF A+  +
Sbjct:    6 LGAPGAGKGTQAKQIAAKYSIPHISTGDIFRANIKNGTELGKKAKTYMDQGALVPDELTCDLVMDRIQQDDCKNGFVLDGFPRTIPQAKALDDALTKIGEKMDYAIDVDVPDENIVNRMGGRRACLNCGATYHIVFNPTKVEGKCDACGADTVLRDDDKPETVQKRLAVYHEQTQPLIEYYDKQGILKSVDGTKPMDEVFSAIVGI 211          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_BACTN (Adenylate kinase OS=Bacteroides thetaiotaomicron GN=adk PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.419e-23
Identity = 68/182 (37.36%), Postives = 105/182 (57.69%), Query Frame = 1
Query:  226 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKIEPE------FVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF-DAVKAV 741
            G PGSGKGTQ   IVE +G  H+S GD+LRAEIK+G+E G   +  I +G+++P E+ I +L    +   + K +I DGFPR     A  EA+ K+  E       +L  +  E+E+  R++ R  + GR DDN ETI+KR  V+   + P++ +Y+ + K + I+    +  +F D  +AV
Sbjct:    8 GAPGSGKGTQSERIVEKYGINHISTGDVLRAEIKNGTELGKTAKGYIDQGQLIPDELMIDILASVFDSFKDSKGVIFDGFPR---TIAQAEALKKMLAERGQDVSVMLDLEVPEDELMVRLIKRGKDSGRADDNEETIKKRLHVYHSQTSPLIDWYKNEKKYQHINGLGTMDGIFADICEAV 186          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_AZOPC (Adenylate kinase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=adk PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.419e-23
Identity = 63/175 (36.00%), Postives = 99/175 (56.57%), Query Frame = 1
Query:  226 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 732
            G PGSGKGTQ   I E +    +S G++LR EIK  +E G + +  I +G+++P  +TI++L    ++  N+K ++ DGFPR      A + + K +      V      E+E+ RR+L R +   R+DDN+ETI+ R  V+ E +  V +YY  KGK+ +I     V EVF+ +
Sbjct:    8 GAPGSGKGTQSELISEKYSLYPISTGEILRREIKDKTELGKIAEEYINQGQLLPDYLTIRILVDLFDKVDNNKGYIFDGFPRTISQAKALDDLLKEQNTSIAIVFSLSVDEKELIRRLLKRGKLFSRKDDNLETIQNRLTVYREQTESVQEYYRKKGKLMEIIGKNSVEEVFENI 182          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_STRM5 (Adenylate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=adk PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.853e-23
Identity = 62/172 (36.05%), Postives = 102/172 (59.30%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 720
            LG PGSGKGTQ   + E  G  H+S GD+LRAEI +GSE G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN     A +  + KI +P + V+  D + E +  RI  R   QGR DD+ E +R+R +V+ + + PVV +Y A+G + ++D    + E+
Sbjct:    6 LGPPGSGKGTQATRLKEKLGIAHISTGDMLRAEIAAGSELGKQAKAVMDAGNLVSDDILLGMLESRLTQADVAKGFILDGYPRNVAQANAMDGLLAKIGQPLDAVVQLDVATELLVDRIAGRAKEQGRADDSPEAVRQRLQVYNDQTAPVVDFYAARGTLARVDGVGELDEI 177          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_THEFY (Adenylate kinase OS=Thermobifida fusca (strain YX) GN=adk PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.420e-23
Identity = 62/172 (36.05%), Postives = 93/172 (54.07%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 720
            +G PG+GKGTQ   +        +S GD+ RA +  G+E G   Q  +  G +VP E+T  +++  + E+     FL+DGFPRN       + +     ++ + VL     EEE+ RR+  R +   R DDN ETIR R  V+ E + P+V +YE +G + KIDA  P+ EV
Sbjct:    6 VGPPGAGKGTQAQILASKLSIPKVSTGDIFRANVSGGTELGKKAQAYMDRGDLVPDEITNAMVRDRLAEDDARAGFLLDGFPRNLAQAETLDEMLADLGVKLDVVLELVVDEEEVIRRLAERARIDNRSDDNEETIRHRLVVYREQTAPLVSFYEKRGLLEKIDAVGPIEEV 177          
BLAST of CK935411 vs. ExPASy Swiss-Prot
Match: KAD_MYCA9 (Adenylate kinase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=adk PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.420e-23
Identity = 66/171 (38.60%), Postives = 96/171 (56.14%), Query Frame = 1
Query:  223 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENR---AAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF 723
            LG PG+GKGTQ   I E FG   +S GDL R+ I  G+E G   +  +  G +VPSEVT K+++  ++E      F++DGFPR  +     AA E    +  + VL F    EE+ +R+L R  GR DD  + IR R  V+ + + P+++YY+    ++ IDA   V EVF
Sbjct:    6 LGPPGAGKGTQAQLISEKFGIPQISTGDLFRSNISEGTELGLQAKQYLDAGDLVPSEVTNKMVEARLDEPDAAAGFILDGFPRTVDQADALAAMEEARGVTIDAVLEFRVPVEELVQRLLGR--GRADDTEDIIRNRLNVYRDETAPLLEYYQ--NVLQTIDAVGTVDEVF 172          
The following BLAST results are available for this feature:
BLAST of CK935411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PROAC1.419e-2333.15Adenylate kinase OS=Propionibacterium acnes GN=adk... [more]
KAD_PORGI1.419e-2334.50Adenylate kinase OS=Porphyromonas gingivalis GN=ad... [more]
KAD_PORG31.419e-2334.50Adenylate kinase OS=Porphyromonas gingivalis (stra... [more]
KAD_NITSB1.419e-2335.11Adenylate kinase OS=Nitratiruptor sp. (strain SB15... [more]
KAD_EUBR31.419e-2331.07Adenylate kinase OS=Eubacterium rectale (strain AT... [more]
KAD_BACTN1.419e-2337.36Adenylate kinase OS=Bacteroides thetaiotaomicron G... [more]
KAD_AZOPC1.419e-2336.00Adenylate kinase OS=Azobacteroides pseudotrichonym... [more]
KAD_STRM51.853e-2336.05Adenylate kinase OS=Stenotrophomonas maltophilia (... [more]
KAD_THEFY2.420e-2336.05Adenylate kinase OS=Thermobifida fusca (strain YX)... [more]
KAD_MYCA92.420e-2338.60Adenylate kinase OS=Mycobacterium abscessus (strai... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004562_A12 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0001_IF_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935411 ID=CK935411; Name=CK935411; organism=Citrus sinensis; type=EST; length=948bp
GGGGACAACAACAAAAAACTAACATTGGCAATTGGCATCCCTCTGCCTTC
TTTCTTTCCCTCCATATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCG
CAATTCGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGA
ACTGTGGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAA
GAAGCCCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGTGGAAAAGGAA
CCCAGTGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCT
GGTGATCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCAT
GATTCAGAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAA
TAAAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTC
ATCGATGGTTTTCCCAGAAACGAGGAAAATCGTGCTGCATTTGAAGCTGT
TACCAAAATTGAGCCAGAATTCGTTCTGTTTTTTGACTGTTCTGAGGAGG
AGATGGAGAGGCGCATTTTGAATAGGAATCAGGGAAGAGAAGATGATAAC
GTTGAGACAATTAGGAAGCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCC
TGTGGTTCAATATTATGAAGCTAAGGGTAAAGTTCGGAAGATTGATGCTG
CAAAGCCTGTTGCAGAGGTTTTTGATGCTGTTAAAGCTGTTTTTACCCCA
AAAGATGAGAAGGCTGCTGCTTGGGTCTTCTCTGTCCAGAGTATCAGATT
TAATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTATTATTGTACTT
TATTATTATGAGGTTATTATGCCACATGTTTTACTAGAATGTCATAGAAG
TTCATAGTGTATCATGATATTTATTCTTGTTTGCCTATGTATTCTTGT
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