CK935414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935414 vs. ExPASy Swiss-Prot
Match: H2B4_WHEAT (Histone H2B.4 OS=Triticum aestivum GN=TH153 PE=1 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 6.118e-37 Identity = 78/88 (88.64%), Postives = 83/88 (94.32%), Query Frame = 1 Query: 175 TVETYKIYIFKVPKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHVVSEGTKAVTK 438 ++ETYKIYIFKV KQVHPDIGISSKAM I NSFINDIFEKLA ES++LARYNKKPTITSREIQT+VRLVLPGELAKH VSEGTKAVTK Sbjct: 44 SMETYKIYIFKVLKQVHPDIGISSKAMSITNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTK 131
BLAST of CK935414 vs. ExPASy Swiss-Prot
Match: H2B4_CHLRE (Histone H2B.4 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.325e-36 Identity = 75/87 (86.21%), Postives = 82/87 (94.25%), Query Frame = 1 Query: 178 VETYKIYIFKVPKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHVVSEGTKAVTK 438 VETYK+YI+KV KQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TSREIQTAVRLVLPGELAKH VSEGTKAVTK Sbjct: 63 VETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTK 149
BLAST of CK935414 vs. ExPASy Swiss-Prot
Match: H2B3_CHLRE (Histone H2B.3 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.325e-36 Identity = 75/87 (86.21%), Postives = 82/87 (94.25%), Query Frame = 1 Query: 178 VETYKIYIFKVPKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHVVSEGTKAVTK 438 VETYK+YI+KV KQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TSREIQTAVRLVLPGELAKH VSEGTKAVTK Sbjct: 63 VETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTK 149
BLAST of CK935414 vs. ExPASy Swiss-Prot
Match: H2B2_CHLRE (Histone H2B.2 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.325e-36 Identity = 75/87 (86.21%), Postives = 82/87 (94.25%), Query Frame = 1 Query: 178 VETYKIYIFKVPKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHVVSEGTKAVTK 438 VETYK+YI+KV KQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TSREIQTAVRLVLPGELAKH VSEGTKAVTK Sbjct: 66 VETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTK 152
BLAST of CK935414 vs. ExPASy Swiss-Prot
Match: H2B1_CHLRE (Histone H2B.1 OS=Chlamydomonas reinhardtii GN=H2B PE=1 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.325e-36 Identity = 75/87 (86.21%), Postives = 82/87 (94.25%), Query Frame = 1 Query: 178 VETYKIYIFKVPKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHVVSEGTKAVTK 438 VETYK+YI+KV KQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TSREIQTAVRLVLPGELAKH VSEGTKAVTK Sbjct: 63 VETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTK 149
BLAST of CK935414 vs. ExPASy Swiss-Prot
Match: H2B4_VOLCA (Histone H2B.4 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36 Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 1 Query: 181 ETYKIYIFKVPKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHVVSEGTKAVTK 438 ETYK+YI+KV KQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TSREIQTAVRLVLPGELAKH VSEGTKAVTK Sbjct: 66 ETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTK 151
BLAST of CK935414 vs. ExPASy Swiss-Prot
Match: H2B3_VOLCA (Histone H2B.3 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 150.599 bits (379), Expect = 6.765e-36 Identity = 74/86 (86.05%), Postives = 81/86 (94.19%), Query Frame = 1 Query: 181 ETYKIYIFKVPKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHVVSEGTKAVTK 438 ETYK+YI+KV KQVHPD GISSKAM IMNSFINDIFEK+A E+S+L+RYNKKPT+TSREIQTAVRLVLPGELAKH VSEGTKAVTK Sbjct: 68 ETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTK 153
BLAST of CK935414 vs. ExPASy Swiss-Prot
Match: H2B_PEA (Histone H2B (Fragments) OS=Pisum sativum GN=HIS2B PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.176e-34 Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 1 Query: 184 TYKIYIFKVPKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHVVSEGTKAVTK 438 T KIYIFKV KQVHPDIGISSKAMGIMNSFINDIFEKLA E+SRLARYNKK TIT REIQTAVRL+LPGE+AKH VSE TKAVTK Sbjct: 31 TVKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASEASRLARYNKKSTITPREIQTAVRLLLPGEVAKHKVSEATKAVTK 115
BLAST of CK935414 vs. ExPASy Swiss-Prot
Match: H2B_SALTR (Histone H2B OS=Salmo trutta PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 4.848e-34 Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1 Query: 181 ETYKIYIFKVPKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHVVSEGTKAVTK 438 E+Y IY++KV KQVHPD GISSKAMGIMNSF+NDIFE++A ESSRLA YNK+ TITSREIQTAVRL+LPGELAKH VSEGTKAVTK Sbjct: 34 ESYAIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 119
BLAST of CK935414 vs. ExPASy Swiss-Prot
Match: H2B_ONCMY (Histone H2B OS=Oncorhynchus mykiss PE=1 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 4.848e-34 Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 1 Query: 181 ETYKIYIFKVPKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHVVSEGTKAVTK 438 E+Y IY++KV KQVHPD GISSKAMGIMNSF+NDIFE++A ESSRLA YNK+ TITSREIQTAVRL+LPGELAKH VSEGTKAVTK Sbjct: 34 ESYAIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGESSRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTK 119 The following BLAST results are available for this feature:
BLAST of CK935414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 204
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935414 ID=CK935414; Name=CK935414; organism=Citrus sinensis; type=EST; length=661bpback to top |