CK935417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 5.342e-40 Identity = 78/164 (47.56%), Postives = 115/164 (70.12%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 646 DY+FK+++IGDS VGKS +L RF + + STIGV+F+ RT+ ++GK IK QIWDTAGQER+R +TS+YYRGA G +VVYD+T ++SF++V +W++E+ +A ++ +L+GNK DL + V A +FA+ G+ F E SA N NV+ +F + EI Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 164.851 bits (416), Expect = 5.342e-40 Identity = 78/164 (47.56%), Postives = 115/164 (70.12%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 646 DY+FK+++IGDS VGKS +L RF + + STIGV+F+ RT+ ++GK IK QIWDTAGQER+R +TS+YYRGA G +VVYD+T ++SF++V +W++E+ +A ++ +L+GNK DL + V A +FA+ G+ F E SA N NV+ +F + EI Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB4A_RAT (Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 6.977e-40 Identity = 80/174 (45.98%), Postives = 119/174 (68.39%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 676 D++FK +VIG++ GKS +L +F + +F DS TIGVEF ++ + + GK +K QIWDTAGQER+R+VT +YYRGA GA++VYDIT R++++ + W+ + R A +I IIL GNK DL R V+ +A +FA++ L F E SAL G+NV+ AF + ++I + EL+ Sbjct: 6 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELD 179
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 6.977e-40 Identity = 80/174 (45.98%), Postives = 119/174 (68.39%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 676 D++FK +VIG++ GKS +L +F + +F DS TIGVEF ++ + + GK +K QIWDTAGQER+R+VT +YYRGA GA++VYDIT R++++ + W+ + R A +I IIL GNK DL R V+ +A +FA++ L F E SAL G+NV+ AF + ++I + EL+ Sbjct: 6 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELD 179
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.112e-40 Identity = 83/186 (44.62%), Postives = 124/186 (66.67%), Query Frame = 2 Query: 146 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGP 703 ++ DY+FK+++IGDS+VGKS +L RF + + STIGV+F+ RT+ +GK IK QIWDTAGQER+R +TS+YYRGA G ++VYD T+ +SF++V +W+ E+ +A+ S+ +LIGNK+D+V+ + VS E A++ G+ F E SA + NV+ AF + EI K + K GP Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEI---KKKMGSQTNANKTSGP 185
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 9.112e-40 Identity = 80/174 (45.98%), Postives = 119/174 (68.39%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 676 D++FK +VIG++ GKS +L +F + +F DS TIGVEF ++ + + GK +K QIWDTAGQER+R+VT +YYRGA GA++VYDIT R++++ + W+ + R A +I IIL GNK DL R V+ +A +FA++ L F E SAL G+NV+ AF + ++I + EL+ Sbjct: 6 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELD 179
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 1.190e-39 Identity = 80/164 (48.78%), Postives = 114/164 (69.51%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 646 DY+FK+++IGDS VGKS +L RF + + STIGV+F+ RTV +GK IK QIWDTAGQER+R +TS+YYRGA G +VVYD+T ++SF++V +W+ E+ +A ++ +L+GNK DL + R VS E A++ G+ F E SA + NV+ AF + EI Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI 169
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.190e-39 Identity = 75/172 (43.60%), Postives = 114/172 (66.28%), Query Frame = 2 Query: 158 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKEL 673 Y+ K ++IG +VGKS +L RF N+F S TIGV+F +R V I GK +K QIWDTAGQER+R+V +YYRG+ G +VYD+T R+S++H+ W+ ++++ A + IIL+GNK+DL + R V+ +A + A++ GL F E SAL G+ V+ F + + I + E+ Sbjct: 6 YLVKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQREVTFLEASRIAQENGLLFMETSALTGEGVEEMFLKCTRTIMTKIDSGEV 177
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB1_THEAN (Ras-related protein Rab-1 OS=Theileria annulata GN=rab1 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.554e-39 Identity = 81/171 (47.37%), Postives = 114/171 (66.67%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVAR-WVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 664 DY+FK++VIGDS GKS +L RF N + STIGV+F+ +TV I+ IK QIWDTAGQER+R +TS YYRGA G + VYD+T + SFDH+ W++++ +A S++ +LIGNK DLVD R V A++A AE + + EASA NV+ AF + + + V++ Sbjct: 5 DYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQ 175
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3) HSP 1 Score: 163.31 bits (412), Expect = 1.554e-39 Identity = 78/164 (47.56%), Postives = 114/164 (69.51%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 646 DY+FK+++IGDS VGKS +L RF + + STIGV+F+ RT+ ++GK IK QIWDTAGQER+R +TS+YYRGA G +VVYD+T + SF++V +W++E+ +A ++ +L+GNK DL + V A +FA+ G+ F E SA N NV+ +F + EI Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172 The following BLAST results are available for this feature:
BLAST of CK935417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935417 ID=CK935417; Name=CK935417; organism=Citrus sinensis; type=EST; length=850bpback to top |