CK935417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.096e-44 Identity = 86/172 (50.00%), Postives = 124/172 (72.09%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKE 670 DY+ K+VVIGDS VGKS +LSR+ KNEF STIGVEF T+T+ I+ K+IK Q+WDTAGQE+Y ++T +YY+GA+GA++VY+I R SF+++ +W+++ R +A I+L+GNKSDL + R VS + +FAE + F E SAL+ +NV+TAF L IY ++ K + Sbjct: 9 DYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIYYSLFKNK 180
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.737e-44 Identity = 92/192 (47.92%), Postives = 127/192 (66.15%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELEC--GNGKVDGPPMLAGSK 724 +Y+FK ++IGD VGKS +L +FT+N+F DS TIGVEF TR V +N K IK QIWDTAGQER+RAVT +YYRGA GA++VYDIT+R +++H+ W+ + R + + I+LIGNK DL R V+ E+A FA+ GL F E+SA G+NV+ AF R + I+ +V + ++ G PP K Sbjct: 6 EYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDLIPDGGITKNPPQTITDK 197
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.669e-44 Identity = 85/190 (44.74%), Postives = 128/190 (67.37%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSK 724 DY+FK+++IGDS VGK+ +L RF+++ F STIG++F+ RT+ ++GK IK QIWDTAGQER+R +T+AYYRGA+G ++VYDIT +SFD++ W+ + HA S + +++GNK D+ D R VS E K A D G+ F E SA + NV+ AFF L ++I +++K + + GP + S+ Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKITESR 195
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 4.669e-44 Identity = 85/190 (44.74%), Postives = 128/190 (67.37%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSK 724 DY+FK+++IGDS VGK+ +L RF+++ F STIG++F+ RT+ ++GK IK QIWDTAGQER+R +T+AYYRGA+G ++VYDIT +SFD++ W+ + HA S + +++GNK D+ D R VS E K A D G+ F E SA + NV+ AFF L ++I +++K + + GP + S+ Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKITESR 195
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.098e-44 Identity = 85/183 (46.45%), Postives = 126/183 (68.85%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGP 703 DY+FK+++IGDS VGK+ +L RF+++ F STIG++F+ RT+ ++GK IK QIWDTAGQER+R +T+AYYRGA+G ++VYDIT +SFD++ W+ + HA S + +++GNK D+ D R VS E K A D G+ F EASA + NV+ AFF L ++I +++K + + GP Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGP 188
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.964e-44 Identity = 86/176 (48.86%), Postives = 120/176 (68.18%), Query Frame = 2 Query: 158 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 685 Y+FK ++IGD+ VGKS +L +FT F TIGVEF R + I+GK IK QIWDTAGQE +R++T +YYRGA GA++VYDIT+R++F+H+A W+E+ R HA+ ++ I+LIGNK DL RAV+ E+ +FA++ GL F E SA NV+ AF +EIY + + N Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.964e-44 Identity = 86/176 (48.86%), Postives = 120/176 (68.18%), Query Frame = 2 Query: 158 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 685 Y+FK ++IGD+ VGKS +L +FT F TIGVEF R + I+GK IK QIWDTAGQE +R++T +YYRGA GA++VYDIT+R++F+H+A W+E+ R HA+ ++ I+LIGNK DL RAV+ E+ +FA++ GL F E SA NV+ AF +EIY + + N Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 1.040e-43 Identity = 84/183 (45.90%), Postives = 125/183 (68.31%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGP 703 DY+FK+++IGDS VGK+ +L RF+++ F STIG++F+ RT+ ++GK IK QIWDTAGQER+R +T+AYYRGA+G ++VYDIT +SFD++ W+ + HA S + +++GNK D+ D R VS E K A D G+ F E SA + NV+ AFF L ++I +++K + + GP Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSAGAGGP 188
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.358e-43 Identity = 84/183 (45.90%), Postives = 125/183 (68.31%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGP 703 DY+FK+++IGDS VGK+ +L RF+++ F STIG++F+ RT+ ++GK IK QIWDTAGQER+R +T+AYYRGA+G ++VYDIT +SFD++ W+ + HA S + +++GNK D+ D R VS E K A D G+ F E SA + NV+ AFF L ++I +++K + + GP Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGP 188
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.774e-43 Identity = 86/176 (48.86%), Postives = 121/176 (68.75%), Query Frame = 2 Query: 158 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGN 685 Y+FK ++IGD+ VGKS +L +FT F TIGVEF R +TI+ K IK QIWDTAGQE +R++T +YYRGA GA++VYDIT+R++F+H+A W+E+ R HA++++ I+L+GNK DL RAVS E+ +FA++ GL F EASA NV+ AF + IY + + N Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180 The following BLAST results are available for this feature:
BLAST of CK935417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935417 ID=CK935417; Name=CK935417; organism=Citrus sinensis; type=EST; length=850bpback to top |