CK935417
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.707e-42 Identity = 84/169 (49.70%), Postives = 115/169 (68.05%), Query Frame = 2 Query: 158 YVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSK 664 Y+FK ++IGD+ VGKS +L +FT F TIGVEF R V I+GK IK QIWDTAGQE +R++T +YYRGA GA++VYDIT+R++F+H+ W+E+ R H+ S++ I+LIGNKSDL R V E+ FA + GL F E SA NV+ A+ +EIY + + Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQ 173
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.661e-41 Identity = 82/164 (50.00%), Postives = 117/164 (71.34%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 646 DY+FK+++IGDS VGKS +L RF + + STIGV+F+ RT+ ++GK IK QIWDTAGQER+R +TS+YYRGA G +VVYD+T ++SF++V +W+ E+ +A ++ +L+GNKSDL R VS + A +FAE G+ F E SA N NV+ AF + +I Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI 169
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB4B_RAT (Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.661e-41 Identity = 83/174 (47.70%), Postives = 119/174 (68.39%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 676 D++FK +VIG + GKS +L +F +N+F DS TIGVEF +R V + GK +K QIWDTAGQER+R+VT +YYRGA GA++VYDIT R++++ +A W+ + R A +I +IL GNK DL R V+ +A +FA++ L F E SAL G+NV+ AF + + I + EL+ Sbjct: 6 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELD 179
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.661e-41 Identity = 83/174 (47.70%), Postives = 119/174 (68.39%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 676 D++FK +VIG + GKS +L +F +N+F DS TIGVEF +R V + GK +K QIWDTAGQER+R+VT +YYRGA GA++VYDIT R++++ +A W+ + R A +I +IL GNK DL R V+ +A +FA++ L F E SAL G+NV+ AF + + I + EL+ Sbjct: 6 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELD 179
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.661e-41 Identity = 83/174 (47.70%), Postives = 119/174 (68.39%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 676 D++FK +VIG + GKS +L +F +N+F DS TIGVEF +R V + GK +K QIWDTAGQER+R+VT +YYRGA GA++VYDIT R++++ +A W+ + R A +I +IL GNK DL R V+ +A +FA++ L F E SAL G+NV+ AF + + I + EL+ Sbjct: 6 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELD 179
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.661e-41 Identity = 83/174 (47.70%), Postives = 119/174 (68.39%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELE 676 D++FK +VIG + GKS +L +F +N+F DS TIGVEF +R V + GK +K QIWDTAGQER+R+VT +YYRGA GA++VYDIT R++++ +A W+ + R A +I +IL GNK DL R V+ +A +FA++ L F E SAL G+NV+ AF + + I + EL+ Sbjct: 6 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELD 179
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.169e-41 Identity = 84/183 (45.90%), Postives = 123/183 (67.21%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGP 703 DY+FK+++IGDS VGKS +L RF + + STIGV+F+ RTV ++GK+IK QIWDTAGQER+R +TS+YYRGA G +VVYD+T ++SF++V +W+ E+ +A ++ +L+GNKSDL + V A FA++ G+ F E SA N NV+ AF + EI ++ + + K GP Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPT---KAGGP 185
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.833e-41 Identity = 81/164 (49.39%), Postives = 117/164 (71.34%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 646 DY+FK+++IGDS VGKS +L RF + + STIGV+F+ RTV ++GK+IK QIWDTAGQER+R +TS+YYRGA G +VVYD+T ++SF++V +W+ E+ +A ++ +L+GNKSDL + V + A FA++ G+ F E SA N NV+ AF + EI Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.699e-41 Identity = 88/214 (41.12%), Postives = 132/214 (61.68%), Query Frame = 2 Query: 146 DKIDYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEIYGAVSKKELECGNGKVDGPPMLAGSKIDVISGADLEISEMKKLSTCS 787 ++ DY+FK+++IGDS+VGKS L RF + + STIGV+F+ RTV + GK +K QIWDTAGQER+R +TS+YYRGA G ++VYDIT +SF++V +W++E+ +A+ S+R +L+GNK DL + RAV A +A++ G+ F E SA NV+ AF + A KK ++ P S + + G ++ + K CS Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAM-----SAAIKKSKAGSQAALERKP----SNVVQMKGRPIQQEQQKSSRCCS 207
BLAST of CK935417 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.699e-41 Identity = 82/164 (50.00%), Postives = 115/164 (70.12%), Query Frame = 2 Query: 155 DYVFKVVVIGDSAVGKSQILSRFTKNEFFFDSKSTIGVEFQTRTVTINGKIIKAQIWDTAGQERYRAVTSAYYRGALGAVVVYDITKRQSFDHVARWVEELRAHADSSIRIILIGNKSDLVDMRAVSAEDAVKFAEDQGLFFSEASALNGDNVDTAFFRLLQEI 646 DY+ K+++IGDS VGKS +L RF+++ F +TIG++F+ RT+ ++GK IK QIWDTAGQER+R +T+AYYRGA+G +++YD+T ++SFD+V W + HA ++ ILIGNK D D R VS E A++ G+ F EASA NVD AFF L +EI Sbjct: 7 DYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170 The following BLAST results are available for this feature:
BLAST of CK935417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935417 ID=CK935417; Name=CK935417; organism=Citrus sinensis; type=EST; length=850bpback to top |