CK935443
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: AQP6_RAT (Aquaporin-6 OS=Rattus norvegicus GN=Aqp6 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.453e-25 Identity = 70/160 (43.75%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 313 SGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 783 SG H NPAVT LVG +ISL R + Y AQL G+TV LL VT G +T + + AV E+V+T LV V+A+ +D ++ +LG+ A + IG V L G F G SMNPA SFGPA++ + HW++WVGPL G LA ++Y F Sbjct: 74 SGAHANPAVTLAYLVGSHISLPRAVAYIAAQLAGATVGAALLYGVTPGGVRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFAS-MDSRQ-TLGSPAAM-IGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNF 230
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.101e-24 Identity = 75/231 (32.47%), Postives = 113/231 (48.92%), Query Frame = 1 Query: 136 RAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX----NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 783 RA +AE ++TL+F++ + + + T A ISGGH+NPAVT G + +SL+R +LY +AQ LG+ C +K + T A L+ G + EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA G +NPA SFG A++ +WD+ W++WVGP+IG A ++F Sbjct: 39 RAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQF 268
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.878e-24 Identity = 75/232 (32.33%), Postives = 114/232 (49.14%), Query Frame = 1 Query: 136 RAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX------NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 780 RA +AE ++TL+F++ + + + T A+ ISGGH+NPAVTFG + +SL+R ILY +AQ LG+ L+K + A L++G + EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA G +NPA S G A+V S +W + W++WVGP IG +A + ++ Sbjct: 36 RAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQ 266
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 5.463e-24 Identity = 79/233 (33.91%), Postives = 115/233 (49.36%), Query Frame = 1 Query: 136 RAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLK-FVTNGQTT---SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQS 801 RA +AE I+TL+F++ + + K T G ISGGH+NPAVTFG + +SL+R + Y IAQ LG+ +K F+ T A ++ G A+ EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA G +NPA SFG A++ +WD+ W++WVGP + G LA Y + + S Sbjct: 38 RALIAEFIATLLFLYVTVATVIGHKKQT--GPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVF-SATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFL-GALAAAAYHQYILRAS 266
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 7.135e-24 Identity = 77/238 (32.35%), Postives = 119/238 (50.00%), Query Frame = 1 Query: 136 RAALAELISTLIFVFAGEGSGMAF-NKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVT----NGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQL 813 RA +AE ++TLIF++ + + + N+ A T +SGGH+NPAVT G G +SL+R +LY +AQ LG+ ++K + + A +S G A A+ EIV TF LVYTV+ +A DPK+ + + + P+ IGF V LA G +NPA S G A++ +W +HW++WVGP+IG LA ++ ++ + L Sbjct: 44 RALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVF-SATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLRGEAAKAL 280
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.217e-23 Identity = 77/231 (33.33%), Postives = 113/231 (48.92%), Query Frame = 1 Query: 136 RAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKF--------VTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYEF 783 RA +AE I+TL+F++ + + T G ISGGH+NPAVTFG + +SL R + Y +AQ LG+ L+K + G T A S+G A+ EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA G +NPA SFG A++ +WD+HW++WVGP +G A +++ Sbjct: 36 RAIIAEFIATLLFLYVTVATVIGHKNQT--GPCGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTG----TALGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDHWIFWVGPFVGALAAAAYHQY 259
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 1.217e-23 Identity = 76/226 (33.63%), Postives = 112/226 (49.56%), Query Frame = 1 Query: 136 RAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG--QTT--SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 780 RA +AE ++T +F++ + M N T A ISGGH+NPAVTFG + +SL R + Y + Q LG+ ++K G +TT A ++ G + + EIV TF LVYTV+ +A D K+ + + +AP+ IGF V LA G +NPA S G A++ +WD+HW++WVGP IG LA I ++ Sbjct: 54 RAGIAEFMATFLFLYITVLTVMGVNNSTSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQ 276
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.590e-23 Identity = 68/161 (42.24%), Postives = 86/161 (53.42%), Query Frame = 1 Query: 313 SGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG---QTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIA-IGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 783 SG H NPAVT LVG +ISL R + Y AQL G+T LL VT G +T + + AV E+V+T LV V+A+ G +P A IG V L G F G SMNPA SFGPA++ + HW++WVGPL G LA ++Y F Sbjct: 74 SGAHANPAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETLGVNVVHNSTSTGQAVAVELVLTLQLVLCVFASM----DGRQTLASPAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGKFAVHWIFWVGPLTGAVLASLIYNF 230
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.541e-23 Identity = 73/232 (31.47%), Postives = 115/232 (49.57%), Query Frame = 1 Query: 136 RAALAELISTLIFVFAGEGSGMAFNKLTH---NGANTPSXXXXXXXXXXXXXXXXXXXXX---NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLK----FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 780 RA +AE ++TL+F++ + + + T NGA+ +SGGH+NPAVT G + +SL+R +LY AQ LG+ L+K + + A L++G + EI+ TF LVYTV+ +A DPK+ + + +AP+ IGF V LA G +NPA S G A+V + +W + W++WVGP IG +A + ++ Sbjct: 39 RALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQ 269
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.541e-23 Identity = 75/225 (33.33%), Postives = 111/225 (49.33%), Query Frame = 1 Query: 136 RAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN----GQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGS----LGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVY 777 RA +AE ++T +F++ + M +K + A ISGGH+NPAVTFG + +SL R + Y + Q LG+ ++K G A A++ G + + EIV TF LVYTV+ +A D K+ + + +AP+ IGF V LA G +NPA S G A+V S +W++HW++WVGP IG LA I + Sbjct: 54 RAGIAEFVATFLFLYISILTVMGVSKSSSKCATV--GIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVF-SATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYH 275 The following BLAST results are available for this feature:
BLAST of CK935443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935443 ID=CK935443; Name=CK935443; organism=Citrus sinensis; type=EST; length=859bpback to top |