CK935443

Overview
NameCK935443
Unique NameCK935443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.664e-20
Identity = 70/215 (32.56%), Postives = 101/215 (46.98%), Query Frame = 1
Query:  133 LRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 777
            L+  +AE I T   +FAG GS +A NK+ +     P                       ISG H NPAVT    + G     +  LY IAQL+GS +A   L  + +    + F          ++  EI+++F L++ +   A D +  ++G +A IA+G  +  N+   G   GASMNPA S GPA+V   +   WVY VGP+IG      VY
Sbjct:   42 LQKLIAEAIGTYFVIFAGCGS-VAVNKI-YGSVTFPGICVTWGLIVMVMVYTVGY----ISGAHFNPAVTITFSIFGRFPWKQVPLYIIAQLMGSILASGTLALLFDVTPQAYFGTVPVGSNGQSLAIEIIISFLLMFVISGVATDDR--AIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIVKHVYTGLWVYVVGPIIGTLAGAFVY 248          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP21_MAIZE (Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 6.251e-20
Identity = 63/214 (29.44%), Postives = 105/214 (49.07%), Query Frame = 1
Query:  124 PDALRAALAELISTLIFVFAGEGS----GMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIG 753
            P  L+  ++E++ST + VF   G+    G   ++++  G +                        +ISG H+NPAVT    V  +   ++   YW AQ  GS  A  +LK V +          +G   W+++V EI++TF +++   A A D +  ++G +A +A+G  V    +  GA  G SMNPA + GPAL S  +   W+Y++GP++G
Sbjct:   43 PHLLKKVVSEVVSTFLLVFVTCGAAGIYGSDKDRISQLGQSVAGGLIVTVMIYAVG---------HISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGSICASFVLKAVLHPIAVLGTTTPTGPH-WHSLVIEIIVTFNMMFVTLAVATDTR--AVGELAGLAVGSAVCITSIFAGAVSGGSMNPARTLGPALASNLYTGLWIYFLGPVLG 244          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.375e-19
Identity = 61/183 (33.33%), Postives = 92/183 (50.27%), Query Frame = 1
Query:  307 NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFF-FINQSHEQLPTTEY*AKSLPSM 852
            +ISG H NPAVT      G     +   Y +AQ+LG+T+A   L+ +  G+               ++V EI+ TF L++ +   A D +  ++G +A +A+G  +  N+L  G   GASMNPA S GPALVS  + + WVY VGP++G       Y    F N+   ++  +    KS   M
Sbjct:   96 HISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLRLMFGGRHEHFPGTLPTGSEVQSLVIEIITTFYLMFVISGVATDNR--AIGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGEYTSIWVYVVGPVVGAVAGAWAYNLIRFTNKPLREITKSTSFLKSTSRM 276          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.052e-19
Identity = 71/228 (31.14%), Postives = 107/228 (46.93%), Query Frame = 1
Query:  136 RAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLK------FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKK----GSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV---SWSWDNHWVYWVGPLIGGGLAGIVYE 780
            R  +AE ++T +F++    + M  +K T   A                         +   GH+NPAVTFG  +   +SL R + Y I Q LG+     ++K      ++ NG   +  A   G    + +  EIV TF LVYTV+ +A D K+      +  +AP+ IGF V    LA     G  +NPA S G A++     +W +HW++WVGP IG  LA I ++
Sbjct:   54 RPGIAEFVATFLFLYISILTVMGVSKSTSKCATVGIQGIAWSFGGMILALVYCTAGIS---GHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVA--PGYTKGDGLGAEIVGTFILVYTVF-SATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQ 275          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP12_ORYSJ (Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica GN=NIP1-2 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 5.291e-19
Identity = 68/209 (32.54%), Postives = 96/209 (45.93%), Query Frame = 1
Query:  145 LAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSA------FALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIG 753
            LAE++ T   +FAG G+ +  N+ T      P                      +ISG H NPAVT      G     +   Y +AQ+LGST+A L L+ V  G    A      F  +       A   E V++F L++ V   A D +  ++G +A +A+G  V  N+L  G   GASMNPA S GPA+V+  +   WVY   P+ G
Sbjct:   67 LAEILGTYFMIFAGCGA-VVVNQSTGGAVTFPGICAVWGLVVMVLVYTVS----HISGAHFNPAVTVAFATCGRFRWKQVPSYVVAQVLGSTMASLTLRVVFGGGGGGARGEHLFFGTTPAGSMAQAAALEFVISFFLMFVVSGVATDNR--AIGELAGLAVGATVAVNVLFAGPVTGASMNPARSLGPAMVAGRYGGVWVYVAAPVSG 268          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.911e-19
Identity = 67/211 (31.75%), Postives = 99/211 (46.92%), Query Frame = 1
Query:  145 LAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 777
            +AE+I T   VF+G   G+    + + G  T                       +ISG H NPAVT    +       +  LY  AQ  GS +A L L+ +      + F  +       A+V EI+++F L++ +   A D +  ++G +A IA+G  +  N+   G   GASMNPA S GPALV   + + WVY VGP++G    G VY
Sbjct:   46 IAEMIGTYFIVFSG--CGVVVVNVLYGGTIT---FPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFGTTPADSPARALVAEIIISFLLMFVISGVATDNR--AVGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMGVYKHIWVYIVGPVLGVISGGFVY 249          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.540e-18
Identity = 62/203 (30.54%), Postives = 92/203 (45.32%), Query Frame = 1
Query:  145 LAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIG 753
            +AE++ T   +FAG  + +A NK T      P                      +ISG H+NPAVT      G     R   Y  AQ+ GS  A   L+ +  G     F  +       ++  E ++TF L++ V   A D +  ++G +A +A+G  V  N+L  G   GASMNPA + GPA++   +   WVY  GP+ G
Sbjct:   57 IAEILGTFFLIFAG-CAAVAVNKRTGGTVTFPGICITWGLAVMVMVYSVG----HISGAHLNPAVTLAFATCGRFPWRRVPAYAAAQVAGSAAASAALRALFGGAPEHFFGTAPAGSDVQSLAMEFIITFYLMFVVSGVATDNR--AIGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGRYTGIWVYIAGPVFG 252          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.479e-18
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  310 ISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFA-------LSSGVGAWNAVVFEIVMTFGLVYTVYATAL-DPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVY 777
            +SG ++NPAVT   L+ G + L+  + Y  AQ+LG    C+    +  G   + +        L+ G+    A + E+++T  L   V  T++ +     L  IAP AIG  +   +  G  F G ++NP    GP+++S  W +HWVYW+GP++G  LA  +Y
Sbjct:   90 VSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILG----CIAGAGILYGCLPNMYRIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTSVFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVRVLGPSIISGVWSHHWVYWLGPIVGAILAAFIY 249          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.979e-18
Identity = 53/159 (33.33%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  307 NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 783
            +ISG H+NPAVT       +   ++   YW AQ  G+  A  +LK V +          SG   W+A++ EIV+TF +++   A A D +  ++G +A +A+G  V    +  G   G SMNPA +  PA+ S  +   W+Y++GP+IG      VY +
Sbjct:  104 HISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLHPIAVIGTTTPSGPH-WHALLIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVIGTLSGAWVYTY 259          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP23_MAIZE (Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.223e-17
Identity = 52/159 (32.70%), Postives = 81/159 (50.94%), Query Frame = 1
Query:  307 NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEF 783
            +ISG H+NPAVT       +   ++   YW AQ  G+  A  +LK V            SG   W+A+  EIV+TF +++   A A D +  ++G +A +A+G  V    +  G   G SMNPA +  PA+ S  +   W+Y++GP++G      VY +
Sbjct:  107 HISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVLQPIAVIGTTTPSGPH-WHALAIEIVVTFNMMFVTCAVATDSR--AVGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASNVFTGLWIYFLGPVVGTLSGAWVYTY 262          
The following BLAST results are available for this feature:
BLAST of CK935443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
NIP1_NICAL3.664e-2032.56Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]
NIP21_MAIZE6.251e-2029.44Aquaporin NIP2-1 OS=Zea mays GN=NIP2-1 PE=2 SV=2[more]
NIP11_MAIZE2.375e-1933.33Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1[more]
PIP11_MAIZE4.052e-1931.14Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
NIP12_ORYSJ5.291e-1932.54Aquaporin NIP1-2 OS=Oryza sativa subsp. japonica G... [more]
NIP41_ARATH6.911e-1931.75Putative aquaporin NIP4-1 OS=Arabidopsis thaliana ... [more]
NIP13_ORYSJ1.540e-1830.54Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica G... [more]
AQPA_DICDI4.479e-1831.71Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE... [more]
NIP22_MAIZE9.979e-1833.33Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1[more]
NIP23_MAIZE2.223e-1732.70Aquaporin NIP2-3 OS=Zea mays GN=NIP2-3 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_F11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935443 ID=CK935443; Name=CK935443; organism=Citrus sinensis; type=EST; length=859bp
GGGGGACCAGTACACTTACGTGAACCAGTAGTAATCACACCCCAAAGGTT
CAATCTTCATCGTTTGTTCTCCATCATGCCGATCAGAAACATTGCCGTTG
GCCATCCCCGTGAGGCGATTCACCCAGATGCCCTAAGGGCAGCCCTAGCA
GAGCTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCAT
GGCCTTCAACAAGCTCACTCACAACGGCGCCAATACCCCCTCCGGCCTCG
TCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTT
GGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGC
CCTCGTTGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATCG
CCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACC
AACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATG
GAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACAG
TGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCA
CCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGGC
GTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGG
TGAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCATC
GGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGTC
GCATGAGCAGCTCCCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCTA
TGTGAGTTT
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