CK935443

Overview
NameCK935443
Unique NameCK935443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: AQPZ_ECO57 (Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.210e-16
Identity = 56/171 (32.75%), Postives = 84/171 (49.12%), Query Frame = 1
Query:  307 NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-----TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 777
            +ISGGH NPAVT G   GG       + Y IAQ++G  VA  LL  + +G+T      S FA +        G    +A+V E+V++ G +  ++       K +    APIAIG  +    L        S+NPA S   A+    W+ +  W +WV P++GG + G++Y
Sbjct:   56 HISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGAT---DKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIY 223          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16
Identity = 66/220 (30.00%), Postives = 97/220 (44.09%), Query Frame = 1
Query:  148 AELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHE 807
            AE + TLI +FAG  + +   K   +GA T                       +ISG H+NPAVT       +       +Y  AQ++ S  A   LK V    T S       VG   A   E +++F L++ V A A D +  ++G +A IA+G  V  NIL  G    ASMNP  + GPA+ + ++   WVY   P++G  +    Y    + +  E
Sbjct:   84 AEFVGTLILIFAGTATAIVNQKT--DGAET---LIGCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFE-PTMSGGVTVPTVGLSQAFALEFIISFNLMFVVTAVATDTR--AVGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRAIWVYLTAPILGALIGAGTYTIVKLPEEDE 295          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: AQPZ_SHEON (Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16
Identity = 60/176 (34.09%), Postives = 87/176 (49.43%), Query Frame = 1
Query:  307 NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGA-------------WNAVVFEIVMT-FGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYEFF 786
            +ISG H+NPAV+FG   GG       + Y IAQ+ G      +L  + +GQ    F+L++G  +              + ++ EIVMT F L+  + +T     KG     APIAIG  +    L        S+NPA S GPAL    W+    W++W  P+IG  LAG++Y +F
Sbjct:   56 HISGCHLNPAVSFGLWAGGRFPTSELLPYIIAQVAGGIAGAGVLYLIASGQ--EGFSLAAGFASNGFGEHSPGGYSMISVMICEIVMTLFFLLVILGSTDERAPKG----FAPIAIGLCLTLIHLISIPISNTSVNPARSTGPALFVGDWAVSQLWLFWAAPIIGAILAGVIYRYF 225          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16
Identity = 73/242 (30.17%), Postives = 104/242 (42.98%), Query Frame = 1
Query:  136 RAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXX-------------NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLL-LKFVTNGQTT----SAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPK--KGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSW------SWDNHWVYWVGPLIGGGLAGIVYEF 783
            +  +AE I T I VF G GS  A   +  +G  +P+                                  NISG H+NPAVT G            + Y IAQLLG+     + L+    G  T     A A   G+  W A++ E+V TF L+ T+   A+D +  KG  G I    IG  V   I   G   G+S+NPA +FGP L          W+ + +Y +GP++G  LA + Y++
Sbjct:    6 KRCIAEFIGTFILVFFGAGSA-AVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAGII----IGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQY 242          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: AQPZ_BRAJA (Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15
Identity = 59/173 (34.10%), Postives = 83/173 (47.98%), Query Frame = 1
Query:  307 NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNG----QTTSAFALSSGVGAWN--------AVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYEF 783
            +ISG H+NPAVT G   GG     + + Y IAQ+ G+ VA  LL  + +G      T  FA S+G  A +          + E+VMT   ++ +               AP+AIG  +    L        S+NPA S GPAL    W+    W++WV PLIGG L G++Y +
Sbjct:   57 HISGCHLNPAVTVGLAAGGRFPAGQILPYVIAQVCGAIVAAELLYIIASGAPGFDVTKGFA-SNGYDAHSPGQYSMMACFLTEVVMTMMFLFIIMGATHGRAPAG---FAPLAIGLALVMIHLVSIPVTNTSVNPARSTGPALFVGGWAMAQLWLFWVAPLIGGALGGVIYRW 225          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 56/156 (35.90%), Postives = 80/156 (51.28%), Query Frame = 1
Query:  307 NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTN-GQTTSAFALSSGVGAW------NAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIG 753
            ++SG H NPAV+            +   Y  AQLLGST+A  +L+ V +      +      VG +       + V E + TF L++ + A A D  K + G+ A IAIG  +  +IL  G   GASMNPA S GPAL+   + + W+Y V P+IG
Sbjct:   95 HVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYPSNSNTTSFVMEFIATFNLMFVISAVATD--KRATGSFAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWGCYKDLWLYIVSPVIG 248          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 58/172 (33.72%), Postives = 87/172 (50.58%), Query Frame = 1
Query:  307 NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGA-------------WNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVY 777
            +ISG H+NPAV+FG +VGG       + Y IAQ++G+ +A  ++  + +G+  + F LS+G+ +                 V E+VMT  +   V   A D +  +    APIAIG  +    L        S+NPA S GPAL    W+    W++WV PLIG  + G +Y
Sbjct:   57 HISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGK--AGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMT-AMFLVVIMGATDAR--APAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGPALFVGGWALQQLWLFWVAPLIGAAIGGALY 223          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: AQPZ2_RHIME (Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.718e-15
Identity = 55/169 (32.54%), Postives = 81/169 (47.93%), Query Frame = 1
Query:  310 ISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT---TSAFALS-------SGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALV--SWSWDNHWVYWVGPLIGGGLAGIVYE 780
            ISGGH NPAV+ G  V G +     + Y IAQ+ G+ +A  +L  +  G+      +FA +        G     A+V E+VMTF  +  +  +     +      APIAIG  +    L        S+NPA S G AL    W+    W++W+ PL G  +AGIV++
Sbjct:   57 ISGGHFNPAVSLGLAVAGRVPAASLVSYVIAQVAGAIIAAAVLYVIATGKADFQLGSFAANGYGEHSPGGYSLTAALVTEVVMTFFFLIIILGST---HRRVPAGFAPIAIGLALTLIHLVSIPVTNTSVNPARSTGQALFVGGWALSQLWLFWIAPLFGAAIAGIVWK 222          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP31_MAIZE (Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.549e-15
Identity = 53/178 (29.78%), Postives = 86/178 (48.31%), Query Frame = 1
Query:  307 NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLK-----FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 825
            +ISG H+NP++T       +   L+   Y   Q L S  A   LK     F++ G T     +S+      A   E +++F L++ V A A D +  ++G +A IA+G  V  NIL  G   G SMNP  + GPA+ + ++   W+Y + P +G      VY+   +   + + P T+
Sbjct:  126 HISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQALASVCAAFALKGVFHPFLSGGVTVPDATVSTA----QAFFTEFIISFNLLFVVTAVATDTR--AVGELAGIAVGAAVTLNILVAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLLAPTLGALAGASVYKAVKLRDENGETPRTQ 297          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: NIP31_ORYSJ (Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica GN=NIP3-1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.636e-15
Identity = 54/175 (30.86%), Postives = 85/175 (48.57%), Query Frame = 1
Query:  307 NISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLK-----FVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLP 816
            +ISG H+NP++T       +   L+   Y   Q+LGS  A   LK     F++ G T     +S+      A   E ++TF L++ V A A D +  ++G +A IA+G  V  NIL  G   G SMNP  + GPA+ + ++   W+Y + P +G      VY    +   + + P
Sbjct:  135 HISGAHLNPSLTIAFAALRHFPWLQVPAYVAVQVLGSICAGFALKGVFHPFLSGGVTVPDPTISTA----QAFFTEFIITFNLLFVVTAVATDTR--AVGELAGIAVGAAVTLNILIAGPTTGGSMNPVRTLGPAVAAGNYRQLWIYLIAPTLGAVAGAGVYTAVKLRDENGETP 303          
The following BLAST results are available for this feature:
BLAST of CK935443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
AQPZ_ECO573.210e-1632.75Aquaporin Z OS=Escherichia coli O157:H7 GN=aqpZ PE... [more]
NIP61_ARATH4.193e-1630.00Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1... [more]
AQPZ_SHEON4.193e-1634.09Aquaporin Z OS=Shewanella oneidensis GN=aqpZ PE=3 ... [more]
AQPM_METTM4.193e-1630.17Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
AQPZ_BRAJA1.220e-1534.10Aquaporin Z OS=Bradyrhizobium japonicum GN=aqpZ PE... [more]
NIP31_ARATH2.081e-1535.90Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1... [more]
AQPZ_PSEPK2.081e-1533.72Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
AQPZ2_RHIME2.718e-1532.54Aquaporin Z 2 OS=Rhizobium meliloti GN=aqpZ2 PE=3 ... [more]
NIP31_MAIZE3.549e-1529.78Aquaporin NIP3-1 OS=Zea mays GN=NIP3-1 PE=2 SV=1[more]
NIP31_ORYSJ4.636e-1530.86Aquaporin NIP3-1 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_F11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935443 ID=CK935443; Name=CK935443; organism=Citrus sinensis; type=EST; length=859bp
GGGGGACCAGTACACTTACGTGAACCAGTAGTAATCACACCCCAAAGGTT
CAATCTTCATCGTTTGTTCTCCATCATGCCGATCAGAAACATTGCCGTTG
GCCATCCCCGTGAGGCGATTCACCCAGATGCCCTAAGGGCAGCCCTAGCA
GAGCTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCAT
GGCCTTCAACAAGCTCACTCACAACGGCGCCAATACCCCCTCCGGCCTCG
TCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTT
GGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGC
CCTCGTTGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATCG
CCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACC
AACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATG
GAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACAG
TGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCA
CCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGGC
GTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGG
TGAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCATC
GGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGTC
GCATGAGCAGCTCCCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCTA
TGTGAGTTT
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