CK935443

Overview
NameCK935443
Unique NameCK935443
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig239 contig Csv1_Contig239:80..938. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 5.957e-71
Identity = 137/245 (55.92%), Postives = 168/245 (68.57%), Query Frame = 1
Query:   91 IAVGHPREAIHPDALRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 825
            IA G   ++    +++A +AE I+TL+FVFAG GS +A+NKLT + A  P+                     N+SGGH+NPAVT G  VGGNI++L G+ YWIAQ LGSTVACLLLKFVTNG +     +++G+ A   VV EI++TF LVYTVYATA DPKKGSLG IAPIAIGFIVGANILA G F G SMNPA SFGPA+ S  +  +W+YW GPLIGG LAG +Y   FI  +H  LPT+E
Sbjct:    4 IAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFSQNWIYWAGPLIGGALAGFIYGDVFIT-AHAPLPTSE 247          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 7.780e-71
Identity = 139/245 (56.73%), Postives = 168/245 (68.57%), Query Frame = 1
Query:   91 IAVGHPREAIHPDALRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTE 825
            I +G   ++    +L+A L+E I+TL+FVFAG GS +AF KLT + A  P+                     NISGGH+NPAVT G  VGGNI+++ G  YWIAQ LGS VACLLL FVTNG++     +++G+GA   VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+VS  +   W+YWVGPL+GG LAG++Y   FI  S+   PTTE
Sbjct:    4 IEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGLIYGDVFIG-SYAPAPTTE 247          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 3.269e-69
Identity = 136/246 (55.28%), Postives = 174/246 (70.73%), Query Frame = 1
Query:   91 IAVGHPREAIHPDALRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 828
            +A G  R+++   +L+A +AE I+TL+FVFAG GS +A+++LT  GA  P+                     NISGGH+NPAVTFG  VGG+I++L GILYW+AQLLG++VAC LL++VT+GQ      +S G+     VV EIV+TF LVYTVYATA DPKKGSLGTIAP+AIGFIVGANILA G F G SMNPA SFGPA+ + ++  +WVYWVGPL+GGGLAG+VY   FI  S++ +   EY
Sbjct:    4 LAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHGVS-GISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLVGGGLAGLVYGDVFI-ASYQPVGQQEY 247          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 4.269e-69
Identity = 135/247 (54.66%), Postives = 166/247 (67.21%), Query Frame = 1
Query:   91 IAVGHPREAIHPDALRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQS-HEQLPTTEY 828
            +A G   ++    +LRA LAE ISTL+FVFAG GS +A+ KLT + A                         NISGGHVNPAVTFG  VGG I+++ G+ YWIAQLLGST AC LLK+VT G      ++++G+G+   VV EI++TF LVYTVYATA DPKKGSLGTIAP+AIG IVGANILA G F G SMNPA SFGPA+ +  +  HWVYWVGPLIGGGLAG++Y   F+  S H  L + ++
Sbjct:    4 VAFGSFDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSGHWVYWVGPLIGGGLAGLIYGNVFMGSSEHVPLASADF 250          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.242e-68
Identity = 135/247 (54.66%), Postives = 167/247 (67.61%), Query Frame = 1
Query:   88 NIAVGHPREAIHPDALRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 828
            NIA G   ++    +L+A +AE ISTL+FVFAG GS +A+ KLT      P+                     NISGGHVNPAVTFG  +GG I++L G+ YWIAQLLG+ V  +L++F T G  T    LS GVGA+  VV EI++TFGLVYTVYATA DPKKGSLGTIAPIAIGFIVGANIL  G F G SMNPA SFGPA+ S  + N W+YWVGPL+GGGLAG+VY + ++   H  + ++E+
Sbjct:    4 NIAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHGLS-GVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDYTNIWIYWVGPLVGGGLAGLVYRYVYMCGDHAPVASSEF 248          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 2.119e-68
Identity = 134/246 (54.47%), Postives = 172/246 (69.92%), Query Frame = 1
Query:   91 IAVGHPREAIHPDALRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSHEQLPTTEY 828
            +A G   ++    +++A +AE I+TL+FVFAG GS +A+ +LT+ GA  P+                     NISGGH+NPAVTFG  VGG+I++L G+ YWIAQLLG+++ACLLLKFVT+G+      ++ G+     VV EIV+TF LVYTVYATA DPKKGSLGTIAPIAIGFIVGANILA G F G SMNPA SFGPA+ + ++  +WVYWVGPLIGGGLAG+VY   FI  S++ +   +Y
Sbjct:    4 LAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVA-GISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAGNWVYWVGPLIGGGLAGLVYGDVFIG-SYQPVADQDY 247          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.418e-66
Identity = 125/241 (51.87%), Postives = 158/241 (65.56%), Query Frame = 1
Query:   82 IRNIAVGHPREAIHPDALRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQSH 804
            ++ I +GH  EA  PD ++A + E I+T +FVFAG GS MA + L  N                           +ISGGH+NPAVT G L+GG+IS+ R  LYWI QLL S+ AC LL ++T G  T    L+SGV     +++EI++TF L++TVYAT +DPKKGSL    P+  GF+VGANILAGGAF GASMNPA SFGPALVS +W +HWVYWVGPLIGGGLAG +YE   I++ H
Sbjct:    1 MKKIELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGNTL----VGLFAVAVAHAFVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVSGNWTDHWVYWVGPLIGGGLAGFIYENVLIDRPH 237          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.622e-60
Identity = 124/243 (51.03%), Postives = 155/243 (63.79%), Query Frame = 1
Query:   94 AVGHPREAIHPDALRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQT-TSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ-SHEQLP 816
            A+GH REA     +RA LAELI T +FVFAG GS MA  KL   G +T                       ++SGGH+NPAVT G    G I+L R  LY  AQLLGST+ACLLL F+    +     AL +GVGA   V+ E V+TF L++ VYAT +DP++ ++G + P+ +G +VGAN+LAGG F GASMNPA SFGPALV+  W +HWVYWVGPLIGG LAG+VY+  F+ Q  HE LP
Sbjct:    5 ALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWADHWVYWVGPLIGGPLAGLVYDGLFMAQGGHEPLP 246          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 2.348e-59
Identity = 118/229 (51.53%), Postives = 145/229 (63.32%), Query Frame = 1
Query:  112 EAIHPDALRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFINQ 798
            E + P A RAAL+E ++T +FVFA EGS     K+ +    T                       N SGGHVNPAVTFG LVG  IS  R  LYW AQLLG+ +A LLL+  + G     F L   +   +A++ E+VMTFGLVYTVYATA+D + G  G IAP+AIG + GANILAGG FDGA+MNPA +FGPALV W+W +HWVYW+GPLIG G+AG +YEF    Q
Sbjct:   21 EPLVPGATRAALSEFVATAVFVFAAEGSVYGLWKM-YRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGG-GDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQ 247          
BLAST of CK935443 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.165e-58
Identity = 121/247 (48.99%), Postives = 157/247 (63.56%), Query Frame = 1
Query:   91 IAVGHPREAIHPDALRAALAELISTLIFVFAGEGSGMAFNKLTHNGANTPSXXXXXXXXXXXXXXXXXXXXXNISGGHVNPAVTFGALVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQ-TTSAFALSSGVGAWNAVVFEIVMTFGLVYTVYATALDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWDNHWVYWVGPLIGGGLAGIVYEFFFIN-QSHEQLPTTE 825
            +A+GH REA  P  LRA +AEL+ T +FVF+G GS MA  KL   G +T                       ++SGGH+NPAVT G   GG+I+L R  LY  AQLLGS++ACLLL  +T G+      A + GVGA  AV  E V+TF L++ VYAT +D ++ ++G + P+ +G +VGANILAGG + GASMNPA SFGPAL +  W +HW+YWVGPLIGG LAG+VYE  F+    HE LP  +
Sbjct:    4 LALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLG-GGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRR-AVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWADHWIYWVGPLIGGPLAGLVYEGLFMGPPGHEPLPRND 248          
The following BLAST results are available for this feature:
BLAST of CK935443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
TIP_ANTMA5.957e-7155.92Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP22_ARATH7.780e-7156.73Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
TIP23_MAIZE3.269e-6955.28Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
TIP21_ARATH4.269e-6954.66Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP22_ORYSJ1.242e-6854.66Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP21_ORYSJ2.119e-6854.47Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP41_ARATH4.418e-6651.87Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP44_MAIZE3.622e-6051.03Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP32_ORYSJ2.348e-5951.53Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
TIP43_ORYSJ1.165e-5848.99Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_F11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935443 ID=CK935443; Name=CK935443; organism=Citrus sinensis; type=EST; length=859bp
GGGGGACCAGTACACTTACGTGAACCAGTAGTAATCACACCCCAAAGGTT
CAATCTTCATCGTTTGTTCTCCATCATGCCGATCAGAAACATTGCCGTTG
GCCATCCCCGTGAGGCGATTCACCCAGATGCCCTAAGGGCAGCCCTAGCA
GAGCTCATCTCAACTCTAATATTTGTCTTTGCCGGTGAAGGCTCGGGCAT
GGCCTTCAACAAGCTCACTCACAACGGCGCCAATACCCCCTCCGGCCTCG
TCGCCGCCTCTGTTGCTCACGCTTTCGCCCTTTTCGTTGCTGTCGCCGTT
GGCGCCAACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGC
CCTCGTTGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATCG
CCCAGCTTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACC
AACGGCCAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATG
GAACGCAGTCGTTTTCGAGATCGTGATGACATTCGGACTAGTGTACACAG
TGTATGCCACAGCCCTGGACCCAAAGAAGGGAAGCTTGGGGACAATTGCA
CCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCGGGCGGGGC
GTTTGATGGAGCTTCAATGAACCCAGCAGTGTCATTCGGGCCAGCTTTGG
TGAGCTGGAGCTGGGACAACCACTGGGTCTACTGGGTCGGGCCACTCATC
GGTGGTGGGCTAGCTGGCATCGTCTACGAGTTCTTCTTCATTAACCAGTC
GCATGAGCAGCTCCCAACAACCGAGTACTAAGCTAAAAGCTTGCCATCTA
TGTGAGTTT
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