CK935448

Overview
NameCK935448
Unique NameCK935448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length933
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935448 vs. ExPASy Swiss-Prot
Match: UDG_STRPN (UDP-glucose 6-dehydrogenase OS=Streptococcus pneumoniae GN=cap3A PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 81/283 (28.62%), Postives = 132/283 (46.64%), Query Frame = 2
Query:   83 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-TAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIG-GRETPEGQKAVKALKDVYAHWVPEDR--ILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGAKFLNASAGFGGSCFQKDILNL 919
            +KI   G+GYVG   +++  L     EV V+D+   ++ + N+ + PI +  ++  + + +  NL  S D   HV + D+ +  + TPT           D +  E+A +   + + +  IV+ KST+P   T E  EK  T        +I+ +PEFL E  A+ D   P R+++G   +  E  K      D+      ++   IL      AE++KL +N +LA R+   N +    E  G N   +   V  D RIG+ + N S G+GG C  KD   L
Sbjct:    1 MKIAIAGSGYVG---LSLAVLLAQHHEVKVIDVIKDKVESINNRKSPIKDEAIEKYLVE-KELNLEASLD-PAHVYK-DVEYAIIATPTNYDV--DLNQFDTSSVEAAIKTCMEYNDTCTIVI-KSTIPEGYTKEVREKFNTD-------RIIFSPEFLRESKALYDNLYPSRIVVGTDLDDSELTKRAWQFADLLKGGAIKEEVPILVVAFNEAEVAKLFSNTYLATRVRYFNEIDTYSEVKGLNPKTIIDIVCYDPRIGSYYNNPSFGYGGYCLPKDTKQL 267          
BLAST of CK935448 vs. ExPASy Swiss-Prot
Match: UDG_STRP3 (UDP-glucose 6-dehydrogenase OS=Streptococcus pyogenes serotype M3 GN=hasB PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.629e-16
Identity = 76/287 (26.48%), Postives = 128/287 (44.60%), Query Frame = 2
Query:   83 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-TAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDR------ILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGAKFLNASAGFGGSCFQKDILNLV 922
            +KI   G+GYVG     +++L+    EV +VDI  S+++  N+   PI +  ++  +K    K L     ++   +  +   V + TPT           D  + E+  + +  V+    +++ KST+P+    E  +K  T        +I+ +PEFL E  A+ D   P R+++   E    +  VKA  + +A  +          +L      AE  KL AN +LA R++  N +    E+   N   V   +  D RIG  + N S G+GG C  KD   L+
Sbjct:    1 MKIAVAGSGYVGLSLGVLLSLQN---EVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS---KQLSIKATLDSKAAYKEAELVIIATPTNYNS--RINYFDTQHVETVIKEVLSVNSHATLII-KSTIPIGFITEMRQKFQTD-------RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPK--VKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRKLNSHMVIQGISYDDRIGMHYNNPSFGYGGYCLPKDTKQLL 269          
BLAST of CK935448 vs. ExPASy Swiss-Prot
Match: UDG_STRPY (UDP-glucose 6-dehydrogenase OS=Streptococcus pyogenes GN=hasB PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.128e-16
Identity = 75/287 (26.13%), Postives = 128/287 (44.60%), Query Frame = 2
Query:   83 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-TAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDR------ILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGAKFLNASAGFGGSCFQKDILNLV 922
            +KI   G+GYVG     +++L+    EV +VDI  S+++  N+   PI +  ++  +K    K L     ++   +  +   V + TPT           D  + E+  + +  V+    +++ KST+P+    E  +K  T        +I+ +PEFL E  A+ D   P R+++   E    +  VKA  + +A  +          +L      AE  KL AN +LA R++  N +    E+   N   +   +  D RIG  + N S G+GG C  KD   L+
Sbjct:    1 MKIAVAGSGYVGLSLGVLLSLQN---EVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS---KQLSIKATLDSKAAYKEAELVIIATPTNYNS--RINYFDTQHVETVIKEVLSVNSHATLII-KSTIPIGFITEMRQKFQTD-------RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPK--VKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRKLNSHMIIQGISYDDRIGMHYNNPSFGYGGYCLPKDTKQLL 269          
BLAST of CK935448 vs. ExPASy Swiss-Prot
Match: UDG_STRP8 (UDP-glucose 6-dehydrogenase OS=Streptococcus pyogenes serotype M18 GN=hasB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.128e-16
Identity = 75/287 (26.13%), Postives = 128/287 (44.60%), Query Frame = 2
Query:   83 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-TAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDR------ILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGAKFLNASAGFGGSCFQKDILNLV 922
            +KI   G+GYVG     +++L+    EV +VDI  S+++  N+   PI +  ++  +K    K L     ++   +  +   V + TPT           D  + E+  + +  V+    +++ KST+P+    E  +K  T        +I+ +PEFL E  A+ D   P R+++   E    +  VKA  + +A  +          +L      AE  KL AN +LA R++  N +    E+   N   +   +  D RIG  + N S G+GG C  KD   L+
Sbjct:    1 MKIAVAGSGYVGLSLGVLLSLQN---EVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS---KQLSIKATLDSKAAYKEAELVIIATPTNYNS--RINYFDTQHVETVIKEVLSVNSHATLII-KSTIPIGFITEMRQKFQTD-------RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPK--VKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRKLNSHMIIQGISYDDRIGMHYNNPSFGYGGYCLPKDTKQLL 269          
BLAST of CK935448 vs. ExPASy Swiss-Prot
Match: UDG_STRP6 (UDP-glucose 6-dehydrogenase OS=Streptococcus pyogenes serotype M6 GN=hasB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.128e-16
Identity = 75/287 (26.13%), Postives = 128/287 (44.60%), Query Frame = 2
Query:   83 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-TAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDR------ILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGAKFLNASAGFGGSCFQKDILNLV 922
            +KI   G+GYVG     +++L+    EV +VDI  S+++  N+   PI +  ++  +K    K L     ++   +  +   V + TPT           D  + E+  + +  V+    +++ KST+P+    E  +K  T        +I+ +PEFL E  A+ D   P R+++   E    +  VKA  + +A  +          +L      AE  KL AN +LA R++  N +    E+   N   +   +  D RIG  + N S G+GG C  KD   L+
Sbjct:    1 MKIAVAGSGYVGLSLGVLLSLQN---EVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS---KQLSIKATLDSKAAYKEAELVIIATPTNYNS--RINYFDTQHVETVIKEVLSVNSHATLII-KSTIPIGFITEMRQKFQTD-------RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPK--VKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRKLNSHMIIQGISYDDRIGMHYNNPSFGYGGYCLPKDTKQLL 269          
BLAST of CK935448 vs. ExPASy Swiss-Prot
Match: UDG_STRP1 (UDP-glucose 6-dehydrogenase OS=Streptococcus pyogenes serotype M1 GN=hasB PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.128e-16
Identity = 75/287 (26.13%), Postives = 128/287 (44.60%), Query Frame = 2
Query:   83 VKICCIGAGYVGGPTMAVIALKCPSIEVAVVDISVSRINAWNSDQLPIYEPGLDGVVKQCRGKNLFFSTDVEKHVSEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARVIADVSKSDKIVVEKSTVPVK-TAEAIEKILTHNSKGIKFQILSNPEFLAEGTAIQDLFNPDRVLIGGRETPEGQKAVKALKDVYAHWVPEDR------ILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGAKFLNASAGFGGSCFQKDILNLV 922
            +KI   G+GYVG     +++L+    EV +VDI  S+++  N+   PI +  ++  +K    K L     ++   +  +   V + TPT           D  + E+  + +  V+    +++ KST+P+    E  +K  T        +I+ +PEFL E  A+ D   P R+++   E    +  VKA  + +A  +          +L      AE  KL AN +LA R++  N +    E+   N   +   +  D RIG  + N S G+GG C  KD   L+
Sbjct:    1 MKIAVAGSGYVGLSLGVLLSLQN---EVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS---KQLSIKATLDSKAAYKEAELVIIATPTNYNS--RINYFDTQHVETVIKEVLSVNSHATLII-KSTIPIGFITEMRQKFQTD-------RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPK--VKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRKLNSHMIIQGISYDDRIGMHYNNPSFGYGGYCLPKDTKQLL 269          
The following BLAST results are available for this feature:
BLAST of CK935448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
UDG_STRPN1.629e-1628.62UDP-glucose 6-dehydrogenase OS=Streptococcus pneum... [more]
UDG_STRP31.629e-1626.48UDP-glucose 6-dehydrogenase OS=Streptococcus pyoge... [more]
UDG_STRPY2.128e-1626.13UDP-glucose 6-dehydrogenase OS=Streptococcus pyoge... [more]
UDG_STRP82.128e-1626.13UDP-glucose 6-dehydrogenase OS=Streptococcus pyoge... [more]
UDG_STRP62.128e-1626.13UDP-glucose 6-dehydrogenase OS=Streptococcus pyoge... [more]
UDG_STRP12.128e-1626.13UDP-glucose 6-dehydrogenase OS=Streptococcus pyoge... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_E07 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935448 ID=CK935448; Name=CK935448; organism=Citrus sinensis; type=EST; length=933bp
GGGGATATCGTTGTAGAAACAGTTGTTTTGATTTTGAGAAATCGAAGCTC
ACTGAGGTTATATTGATTAGTAAAGGAAAATGGTGAAGATCTGCTGCATC
GGTGCTGGGTATGTTGGGGGGCCGACAATGGCAGTCATTGCACTGAAGTG
CCCATCCATTGAAGTGGCTGTTGTTGATATCTCTGTGTCTCGGATCAATG
CCTGGAACAGTGACCAGCTCCCCATCTATGAGCCTGGACTTGATGGTGTG
GTAAAGCAGTGCCGAGGGAAGAACCTGTTCTTCAGCACCGATGTTGAGAA
GCATGTCTCTGAGGCTGATATTGTCTTTGTTTCGGTCAATACCCCAACTA
AAACTCAGGGTCTTGGTGCTGGCAAAGCTGCAGATCTGACATACTGGGAG
AGCGCTGCTCGTGTGATTGCCGATGTGTCAAAGTCTGACAAAATTGTTGT
TGAGAAATCAACAGTTCCTGTAAAAACTGCTGAGGCAATTGAAAAAATTT
TGACCCACAACAGCAAGGGAATCAAATTCCAGATCCTTTCAAACCCGGAG
TTTCTTGCTGAGGGAACTGCAATACAGGATCTTTTTAACCCAGATCGGGT
CCTTATCGGTGGTAGAGAAACGCCAGAAGGCCAGAAAGCCGTCAAAGCCT
TGAAGGATGTGTATGCACACTGGGTCCCAGAAGACCGAATTTTGACCACC
AACCTCTGGTCTGCAGAGCTTTCGAAGCTTGCAGCCAATGCTTTCTTGGC
ACAGAGGATCTCATCTGTTAATGCCATGTCAGCTCTCTGCGAGGCAACTG
GAGCTAATGTCAGTCAGGTGGCATTTGCTGTTGGTACAGACTCTAGGATT
GGGGCCAAATTCTTGAATGCTAGTGCTGGGTTCGGTGGCTCCTGCTTCCA
GAAGGATATTTTGAATCTGGTTTACATCTGCGA
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