CK935450

Overview
NameCK935450
Unique NameCK935450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length762
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK935450 vs. ExPASy Swiss-Prot
Match: SPI6_SOLTU (Probable serine protease inhibitor 6 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.753e-11
Identity = 55/186 (29.57%), Postives = 92/186 (49.46%), Query Frame = 1 
Query:    7 PVFDIIGNKVKSTLEYKLIPVLDGAGGFSTHLG----TNGQCPLDVIQLSSP-SERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGIEGHPGAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNKIGVSSKDGVRRLALVGDD 513
            PV D+ G ++   L Y +I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD  L    + TGG  G   +    +WFKI ++  F Y    N+++CP +  +SCP     + C K+GV  ++G RRLALV D+
Sbjct:   35 PVLDVTGKELDPRLSYHIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVQSSQFGY----NLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDN 211
The following BLAST results are available for this feature:
BLAST of CK935450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
SPI6_SOLTU5.753e-1129.57Probable serine protease inhibitor 6 OS=Solanum tu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_E09 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_E09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935450 ID=CK935450; Name=CK935450; organism=Citrus sinensis; type=EST; length=762bp
GGGGAACCTGTCTTTGATATCATTGGCAACAAGGTCAAATCCACCCTCGA
GTATAAACTTATCCCAGTCCTAGATGGCGCCGGTGGATTCAGCACACACC
TAGGCACAAATGGACAGTGTCCCTTGGACGTTATCCAATTAAGTTCTCCT
AGCGAAAGGGGAGATAATTTAAGATTACTTCCGTACGACAATTACAAAAT
TGTCAAGGTATCCACTGATGTCAACCTGAGATTCCCCGTAAAAGTTTCTG
TTAAGCCCTGTAATGAAGAACCATTGTGGAAAGTTGATAGCTATGACGAT
CCATTAATTGTAACCGGCGGAATTGAGGGCCACCCAGGAGCTGAAACGTT
GCTAAATTGGTTTAAGATTGAGAAAGCTGGAAATTTTTCATATGGTGGTG
TATACAATATTGTCCATTGTCCGAGTGTCTGTCTTTCTTGTCCTAGACGC
TGCAACAAAATTGGCGTTTCTTCTAAGGATGGCGTTCGACGTCTGGCTCT
AGTTGGTGATGATGAACCGGCTTTGAATGTTCTGTTTTTTCCATCAGAGG
AAAGATCAAGGCTACTTCAAGCTGCTAACGCAATATCAAGGTTTTTTGAA
GCTGCTGAAGCAATATCAATGGCCGCGTAATGAATGAACTAGCGGTATCA
TTCTAAATAATAGACCAGGCTAGTAACCTTTTATCTCTATTACAGAATAA
AAATAACACCGCCTGTGATCCTTTTGCTGTTGCAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
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