CK935451

Overview
NameCK935451
Unique NameCK935451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.255e-12
Identity = 52/154 (33.77%), Postives = 80/154 (51.95%), Query Frame = 3
Query:  339 VGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            VG+  +A A   ++ ++V     +SGGHINPAVT GL    +++L R+ LY+ AQ LG+   C  + AF     +  G   + L  G     G+  E + TF L++ V+ +  DP+R+     V  + PL +G  V    LA  P +G  +NPA
Sbjct:   54 VGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLAC-LLLAFLAVADS--GVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRA-----VGGMGPLLVGLVVGANVLAGGPFSGASMNPA 199          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.551e-12
Identity = 60/211 (28.44%), Postives = 89/211 (42.18%), Query Frame = 3
Query:  183 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYT--VFSATDPKR----SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            L+D +        R+ +AEFI+            I  +  T P++ T   G +    +A AFG  +F  V   A +SGGH+NPAVTF   +G ++ +  A+ Y  +Q LGA   C  +  F              +A       G   E + TF+LVYT  V    +P+       R+     L  L +G       LA   +TG  +NPA
Sbjct:    7 LVDLKRCFSAPSLRSYLAEFISTFLFVFTAVGSAISARMLTTPDV-TSSAGPLVATAVAQAFG--LFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAG----EEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPA 210          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.469e-12
Identity = 47/142 (33.10%), Postives = 72/142 (50.70%), Query Frame = 3
Query:  387 LVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVY-----TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            +++  +GISG  +NPAVT G     ++ ++  + +++ QC+GA+ G G +KA   ++Y R    A  LA G N   G   E++ T  LV+      V++  DPK S        +APL IG AV          TG  +NPA
Sbjct:   80 IIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYER-DLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVAVYNEWDPKISR-------VAPLAIGCAVIAGVGFLNLFTGGSLNPA 213          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.237e-11
Identity = 52/153 (33.99%), Postives = 78/153 (50.98%), Query Frame = 3
Query:  357 AWAFGGMIFILVYCTAG--ISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGA---NELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            A A G  + + V  TAG  ISGGH+NPAVT  L +G  V+L R+ LY+ AQ L +   C  ++          GG A   + LA+G     G+ AE + TF L++ +++   DP++      +P   PL  G  V    +A   ++G  +NPA
Sbjct:   57 AVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLT-------GGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRKL-----LPGAGPLLTGLLVGANSVAGAALSGASMNPA 197          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.755e-11
Identity = 61/202 (30.20%), Postives = 87/202 (43.07%), Query Frame = 3
Query:  222 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC---GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIG---TFVLVYTVFSATDPKRSA----RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            RA  AEF +            I  +  T     T     +    +A AFG  +F  V+  A +SGGH+NPAVTF   +G  +++  A+ Y  +Q LG+   C    ++ A Q     R    A E+       TG GA I+    TF++VYTV  A DP+       +      L  L +G       LA   +TG  +NPA
Sbjct:   18 RAYFAEFFSTFLFVFIAVGSTISARMLTPDE--TSDASSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRI---AVEM-------TGFGAGILEGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPA 205          
The following BLAST results are available for this feature:
BLAST of CK935451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
TIP44_MAIZE3.255e-1233.77Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
TIP51_MAIZE5.551e-1228.44Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
AQPB_DICDI9.469e-1233.10Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
TIP43_MAIZE1.237e-1133.99Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1[more]
TIP51_ORYSJ2.755e-1130.20Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_E11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935451 ID=CK935451; Name=CK935451; organism=Citrus sinensis; type=EST; length=799bp
GGGGACCCATCATTAAACTCTGTAGCAAACACAACAGTCGTAGCTCTTGT
TTCTCCCTCTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGG
GAAGGATGTTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAG
CCAAGGACTACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAG
CTGGGCAAGTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTAC
GCTTTTGTTTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCC
AGACTGATCCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCCT
GGCATCGCTTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCAC
AGCCGGTATTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGT
TCTTGGGGCGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCA
CAGTGCTTGGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAA
ATCATACTACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGAT
ACAACAAGGGCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTT
GTCTACACTGTTTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTC
CCATGTTCCGGTCTTGGCACCACTCCCCATTGGGTTTGCTGTGTTCATGG
TTCACTTGGCCACCATCCCCATCACCGGAACCGGCATCAACCCAGCTAG
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