CK935451

Overview
NameCK935451
Unique NameCK935451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.647e-80
Identity = 154/242 (63.64%), Postives = 171/242 (70.66%), Query Frame = 3
Query:   72 QNKNKREKMGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            +NK +  K+G +             + KDY +PPPAPL +  EL  WSFYRA IAEF+A            +G K       +   C  VGI G+AWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YMV QCLGAICG G VK F    Y R GGGAN +  GY KG GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPA
Sbjct:    3 ENKEEDVKLGANKFRETQPLGTAAQTDKDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKR------SDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 238          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 3.647e-80
Identity = 147/215 (68.37%), Postives = 165/215 (76.74%), Query Frame = 3
Query:  153 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            KDY +PPPAPL +  EL  WSFYRA IAEF+A            +G         +T +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y++ QCLGA+CG G VK FQ+  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPA
Sbjct:   32 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSK------STSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 240          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 4.763e-80
Identity = 147/215 (68.37%), Postives = 165/215 (76.74%), Query Frame = 3
Query:  153 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            KDY +PPPAPL +  EL  WSFYRA IAEF+A            +G         +T +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y++ QCLGAICG G VK FQ+  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPA
Sbjct:   35 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVSK------STSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 243          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 8.124e-80
Identity = 147/215 (68.37%), Postives = 165/215 (76.74%), Query Frame = 3
Query:  153 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            KDY +PPPAPL +  EL  WSFYRA IAEF+A            +G         ++ +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y+V QCLGAICG G VK FQ+  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPA
Sbjct:   32 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITILTVMGVSK------SSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 240          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 296.204 bits (757), Expect = 1.386e-79
Identity = 147/215 (68.37%), Postives = 163/215 (75.81%), Query Frame = 3
Query:  153 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            KDY +PP AP+ + EEL  WSFYRA IAEF+A            +G       N +  +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YM  QCLGAICG G VK FQ+  Y   GGGAN +  GY KG GLGAEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPA
Sbjct:   31 KDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGV------NKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 239          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 3.087e-79
Identity = 148/235 (62.98%), Postives = 170/235 (72.34%), Query Frame = 3
Query:   96 MGKDVEVAXXXXXXXXFSAK-DYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            M    EVA         +AK  Y DPPPAPL+D  ELGKWS YRA+IAEF+A            IGYK+Q       D C GVG  G+AW+FG  IF+LVYCT G+SGGHINPAVT GLF GRK+SL+R +LY+VAQCLGAI G G VK   K  Y+  GGGAN ++DGY+    LGAEI+GTF+LVYTVFSATDPKR+ARDS +PVL PLPIGFAVF+VHLATIPITGTGINPA
Sbjct:    1 MASKEEVAVETVEGGAAAAKAPYWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQ---RATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPA 232          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 3.413e-78
Identity = 143/215 (66.51%), Postives = 162/215 (75.35%), Query Frame = 3
Query:  153 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            +DY +PP APL +  EL  WSFYRA IAEF+A            +G         +  +CG VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL L RK+SL RA+ Y+V QCLGA+CG G VKAF  + Y   GGGAN ++ GY KG GLGAE++GTFVLVYTVFSATD KR+ARDSHVP LAPLPIGFAVF+VHLATIPITGTGINPA
Sbjct:   37 RDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSK------SPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPA 245          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 288.886 bits (738), Expect = 2.212e-77
Identity = 148/216 (68.52%), Postives = 163/216 (75.46%), Query Frame = 3
Query:  153 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQ-KSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            KDY +PPPAPL +  EL  WSFYRA IAEFIA            +G   ++       +C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YMV Q LGAICG G VK F+ K  +    GGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPA
Sbjct:   32 KDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESS------KCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPA 241          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.098e-76
Identity = 144/216 (66.67%), Postives = 162/216 (75.00%), Query Frame = 3
Query:  153 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKS-YYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            KDY DPPPAPL+D  ELGKWS YRA IAEF A            IG K Q+         GG G+ GIAWAFGG+IF+LVYCTAGISGGH+NPAVTF + L R+VSL RA LY +AQC+GA+CG G  +A      Y R+GGGANELA GY+ G G+ AE++GTFVLVYTVFSATDPKR ARDSHVPVLAPLPIG AV +VHLATIPITGTGINPA
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQSGE-------GGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPA 220          
BLAST of CK935451 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.318e-73
Identity = 140/215 (65.12%), Postives = 158/215 (73.49%), Query Frame = 3
Query:  153 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGIPGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPA 797
            KDY +PPPAPL +  EL  WSFYR  IAEF+A            +G         +T +C  VGI GIAW+FGGMI  LVYCTAGISG HINPAVTFGLFL RK+SL RA+ Y++ QCLGAICG G VK FQ+  Y   GG  N +A GY KG GLGAEI+GTF+LVYTVFSATD KR ARDSHVP+LAPLPIGFAVF+VHLAT+ ITGTGINPA
Sbjct:   31 KDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSK------STSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPA 238          
The following BLAST results are available for this feature:
BLAST of CK935451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
PIP1_SOLLC3.647e-8063.64Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP12_MAIZE3.647e-8068.37Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP13_MAIZE4.763e-8068.37Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP11_ORYSJ8.124e-8068.37Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP13_ORYSJ1.386e-7968.37Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP27_ORYSJ3.087e-7962.98Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP16_MAIZE3.413e-7866.51Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP2_PEA2.212e-7768.52Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP28_ORYSJ1.098e-7666.67Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP11_MAIZE4.318e-7365.12Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004555_E11 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935451 ID=CK935451; Name=CK935451; organism=Citrus sinensis; type=EST; length=799bp
GGGGACCCATCATTAAACTCTGTAGCAAACACAACAGTCGTAGCTCTTGT
TTCTCCCTCTCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGG
GAAGGATGTTGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAG
CCAAGGACTACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAG
CTGGGCAAGTGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTAC
GCTTTTGTTTCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCC
AGACTGATCCCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCCT
GGCATCGCTTGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCAC
AGCCGGTATTTCTGGTGGACATATCAACCCGGCTGTGACATTCGGACTGT
TCTTGGGGCGCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCA
CAGTGCTTGGGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAA
ATCATACTACAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGAT
ACAACAAGGGCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTT
GTCTACACTGTTTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTC
CCATGTTCCGGTCTTGGCACCACTCCCCATTGGGTTTGCTGTGTTCATGG
TTCACTTGGCCACCATCCCCATCACCGGAACCGGCATCAACCCAGCTAG
back to top