CK935460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK935460 vs. ExPASy Swiss-Prot
Match: CAX3_ORYSJ (Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica GN=CAX3 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 5.000e-26 Identity = 77/192 (40.10%), Postives = 103/192 (53.65%), Query Frame = 1 Query: 205 LANIQEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTGGGLLNATCGNATELIIAIFALYGRKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKAT-LQLSRASSIVMLIGYFAYLVFQL 777 L +I+ VI +KL++L P P +II VF S+LG+TPLAER+ + TEQ+A YTGPT GGLLNAT GNATE+IIAI+AL I VV+ F GGI + K+Q + + A VNS + S++ A+ + LSR SS +ML+ Y +YL FQL Sbjct: 41 LRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLGYATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHF--THSEVRQGASEVSLSRFSSCIMLVAYASYLYFQL 230
BLAST of CK935460 vs. ExPASy Swiss-Prot
Match: CAX4_ORYSJ (Putative vacuolar cation/proton exchanger 4 OS=Oryza sativa subsp. japonica GN=Os02g0138900 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.548e-18 Identity = 69/186 (37.10%), Postives = 90/186 (48.39%), Query Frame = 1 Query: 223 VILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTE-QIAFYTGPTGGGLLNATCGNATELIIAIFALYGRKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQL 777 V L +KL+VL P LAI WVF LS+LG+ PLAER+ F T+ QI+ G LLN+ GNATELII+I AL K+ VV+ F GG+A + Q + + A VNS Y + + K+ L LSR SS +ML+ Y +YL FQL Sbjct: 67 VFLKSKLNVLIPCGFLAIFLNYMTQRYGWVFPLSMLGIIPLAERLGFATDWQISCEV----GRLLNSAFGNATELIISIHALSRGKLHVVQQCLLGSILSNLLLVLGSAFFSGGLACGKTMQTFSKADAVVNSGLLLMAVMGLLIPAALHYTHSEAQF-GKSELALSRFSSCIMLVAYASYLYFQL 247
BLAST of CK935460 vs. ExPASy Swiss-Prot
Match: VCX1_SCHPO (Vacuolar calcium ion transporter OS=Schizosaccharomyces pombe GN=vcx1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.846e-13 Identity = 51/187 (27.27%), Postives = 88/187 (47.06%), Query Frame = 1 Query: 217 QEVILGTKLSVLFPAIPLAIIGQCFGFAEPWVFALSLLGLTPLAERVSFLTEQIAFYTGPTGGGLLNATCGNATELIIAIFALYGRKIDVVKYXXXXXXXXXXXXXXXXXXFCGGIANLRKEQKYDRKQADVNSXXXXXXXXXXXXXXXFKYAAASSDITAKATLQLSRASSIVMLIGYFAYLVFQL 777 + V++ + +++ +P+ +I F + VF L++L + PLA +SF TEQ++ +GPT G LLNA+ GNA ELI+ + AL ++ +V+ GI R+ ++ A F Y+ + + A L +SR +++++LI Y LVFQL Sbjct: 54 KSVLMSSYFNLMLVFVPIGLIAGWFEWNAKSVFILNMLAIIPLASLLSFATEQLSIISGPTLGALLNASFGNAIELIVGVLALKRGELRIVQSSLLGSILSNLLLVFGMCLVTTGIR--REITTFNITVAQTMIAMLALSTATILIPATFHYSLPDNANSENALLHVSRGTAVIVLIVYVLLLVFQL 238 The following BLAST results are available for this feature:
BLAST of CK935460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935460 ID=CK935460; Name=CK935460; organism=Citrus sinensis; type=EST; length=780bpback to top |