CK935461

Overview
NameCK935461
Unique NameCK935461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length522
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK935461 vs. ExPASy Swiss-Prot
Match: PSBI_LEPTE (Photosystem II reaction center protein I OS=Leptosira terrestris GN=psbI PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.813e-11
Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 2 
Query:  158 MLTLKLFVYTVVIFFVSLFIFGFLSNDPGRNPGR 259
            MLTLK+FVYTVV FFVSLF+FGFLSNDPGRNP R
Sbjct:    1 MLTLKIFVYTVVTFFVSLFVFGFLSNDPGRNPSR 34
The following BLAST results are available for this feature:
BLAST of CK935461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PSBI_LEPTE7.813e-1188.24Photosystem II reaction center protein I OS=Leptos... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_D06 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935461 ID=CK935461; Name=CK935461; organism=Citrus sinensis; type=EST; length=522bp
GGGTGTGAATTTAATTTATGAAAACGATTTTCTNNNTAGAGAATCAAATT
CTAAAAAGAACTTCATTTCTTGATGTCAAAATTGGATATGTAGTATAAAA
ATAGAGAATCTATTCTCTTTTTCCTTTTCCCCAAAAACCTGATTTGGAGA
TTGTGTAATGCTTACTCTCAAACTCTTTGTTTACACCGTAGTGATATTCT
TTGTTTCGCTCTTCATCTTCGGATTCCTGTCTAATGATCCAGGGCGTAAT
CCCGGACGCGAAGAATAAAAAAGGAAGGAGTTGCTTACTTTATTCGTATA
AACGTTCTTAGGATTTTTTGATTCCCAGTTACTATTAAAAATAAAGTAAA
AGTGTTCGCTAAAGTTAAATTTGAAAAATACCAAGCCATCGCCCGAAACG
GAAAGAGAGGGATTCGAACCCTCGGTACGAAGAACTCGTACACCGGATTA
GCAATCCGACGCTTTAATCCACTCAGCCATCTCTCCTAATTGAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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