CK935471

Overview
NameCK935471
Unique NameCK935471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1821 contig Csv1_Contig1821:1..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.354e-21
Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = 3
Query:   21 GENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPW-SGDFALKTLYYGEFQNTGPGSKTANRVPWSS--QIPAEHVNAYSVQNFIQGDEWI 410
            G+ N VTA GR D  Q +GFV  NC +   E+   +        K+YLGRPWK +SRTV +   +E ++ P GWL W   DFA+ TL Y E++N GP   TA RV W     +  E    ++V  F+QG EWI
Sbjct:  468 GQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQ----FKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVLNKEEAMKFTVGPFLQG-EWI 595          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.074e-21
Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = 3
Query:   30 NAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVH----KNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSS---QIPAEHVNAYSVQNFIQGDEWI 410
            N +TA  R +P Q +G V  N ++ G           P V     K YLGRPW+ Y+RTV I   L+ L+ P+GW+ W    AL TLYYGE+QN+GPGS T NRV W+        +    +++  FI    W+
Sbjct:  340 NTITAQSRFNPNQTTGIVIHNSVVKGA----------PGVQLGGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWL 463          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.526e-20
Identity = 48/136 (35.29%), Postives = 77/136 (56.62%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWS--SQIPAEHVNAYSVQNFIQGDEWI 410
            +P + +   VTA GR D  + +G V  N  I G   Y+ +       ++ +LGRPWKE+SRT+ ++  ++ ++ P+GWL W+  FAL TL+Y E++N G GS    RV W    +I       ++  NF++G+ WI
Sbjct:  560 RPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAK----NRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRISDRAAREFAPGNFLRGNTWI 691          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.399e-20
Identity = 52/140 (37.14%), Postives = 76/140 (54.29%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPW---SSQIPAEHVNAYSVQNFIQGDEWISTS 419
            +P   +    TA GR +  + +G    +  I    + + +  +     K YLGRPW+ YSRTV +   ++ LV P GWL W  DFAL+TLYYGE+ N GPGS   NRV W         E  + +SV  FI G++W++++
Sbjct:  375 RPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQAN----FKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNST 510          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.291e-19
Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSS---QIPAEHVNAYSVQNFIQGDEWISTS 419
            +P+ G++N +TA  R      SGF  QNC I  + +            K YLGRPW+ +S    +   +  LV P GW PW G+  L TL+Y E+QN GPG+ T+ RV WS        +    ++V   + G+ W+  S
Sbjct:  356 QPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDL------DTATVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKES 489          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 54/141 (38.30%), Postives = 74/141 (52.48%), Query Frame = 3
Query:   12 PEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWS--GDFALKTLYYGEFQNTGPGSKTANRVPWSS---QIPAEHVNAYSVQNFIQGDEWISTS 419
            P KG+ N +TA GRTD  Q +G    N +I    +   +  S     K Y+GRPW  YSRTV +   ++++V P GW PW+    + L TL+Y E++N GP S T  RV W        A   +A+SV  FI G  W+  S
Sbjct:  396 PLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSV----KTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGS 532          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.687e-19
Identity = 56/141 (39.72%), Postives = 74/141 (52.48%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVH--KNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPW--SGDFALKTLYYGEFQNTGPGSKTANRVPWSS---QIPAEHVNAYSVQNFIQGDEWI 410
            +P KG+ N +TA GR DP Q +G    N  I    +       KP V   K Y+GRPW ++SRTV +   L+ +V P GW PW     F L TL+Y E++NTGP S T  RV W        A   +A++V  FI G  W+
Sbjct:  391 RPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDL------KPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWL 525          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19
Identity = 48/140 (34.29%), Postives = 69/140 (49.29%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSS---QIPAEHVNAYSVQNFIQGDEWISTS 419
            +P  G++N +TA  R      SGF  QNC I  + +            K YLGRPW+ +S    +   +  LV P GW PW G+  L TL+Y E+QN GPG+ T+ RV WS        +    ++V   + G+ W+  S
Sbjct:  383 QPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDL------DTATVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKES 516          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19
Identity = 53/144 (36.81%), Postives = 72/144 (50.00%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHV-------NAYSVQNFIQGDEWISTS 419
            KP   +   +TA  R DP Q +G     C +  T +      S P     YLGRPWK YSR V++  ++   + P GWL W+G FAL +LYYGE+ N G GS    RV W    P  HV       + ++V  FI G  W+ ++
Sbjct:  442 KPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYP----TYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKW----PGYHVITSTVEASKFTVAQFISGSSWLPST 577          
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 3
Query:    9 KPEKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDF-ALKTLYYGEFQNTGPGSKTANRVPWSSQIPA---EHVNAYSVQNFIQGDEWISTSS 422
            +P   + N +TA G+ DP Q +G + Q   I          +        YLGRPWK++S TV +  ++ AL++P GW+ W  +     T++Y E+QN+GPG+  + RV W+   P     +   ++VQ+FIQG EW+  ++
Sbjct:  441 QPLPNQFNTITAQGKKDPNQNTGIIIQKSTITP--------FGNNLTAPTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAA 574          
The following BLAST results are available for this feature:
BLAST of CK935471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
PME45_ARATH2.354e-2142.11Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME38_ARATH3.074e-2138.81Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME43_ARATH1.526e-2035.29Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME40_ARATH3.399e-2037.14Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME30_ARATH1.291e-1934.29Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME60_ARATH1.687e-1938.30Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME59_ARATH1.687e-1939.72Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME42_ARATH2.203e-1934.29Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME61_ARATH3.758e-1936.81Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_PHAVU3.758e-1933.10Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004555_D05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IVF_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935471 ID=CK935471; Name=CK935471; organism=Citrus sinensis; type=EST; length=820bp
GGGAATTAAAGCCGGAGAAAGGTGAGAACAATGCAGTGACTGCTCATGGC
AGAACGGACCCTGCTCAATGGTCAGGTTTCGTTTTCCAGAACTGTTTGAT
CAACGGCACCGAGGAGTACATGAAATTATATTATAGTAAGCCTCGTGTGC
ACAAGAATTACTTGGGGAGGCCATGGAAAGAGTACTCGAGAACTGTTTTT
ATTCACTGTAACTTAGAAGCTCTTGTACATCCAGACGGGTGGCTGCCTTG
GAGCGGTGATTTTGCTTTGAAAACGCTTTACTATGGTGAATTCCAAAATA
CTGGACCCGGGTCTAAGACGGCTAATAGAGTTCCGTGGAGTTCCCAAATT
CCTGCAGAGCATGTTAATGCATATTCGGTGCAGAATTTTATCCAAGGTGA
TGAATGGATTTCGACATCATCTTAATTGCTGCACGCAATAGCAGAATCTG
CTGATTTTTCTTGTACAATTTGTATACCGTGGCTTAAATGATTAAATGAT
TGGGGACTATGGAAATATTTCCCTTTACTGATTTTCTATAAACATTAGTG
TAGTATGATGTAGGCCACATATGTTGCTTGACTTGAAGGCAAAGATGCCA
ATGTGACAAGGCATTAAGTTGAGCTTGTAGCACAAAACGTAATGTCATTC
TATCTGTCAATGTACTATTTTTTCAGCTTTATGAGATGGAGAATGGAGAT
GTACAGCTTAGAGCCTTAATATGATTAAGACTCCGCAATAATGGAAATGA
GTGGTGGGGGAAGCAGCTTCTGCATTTTCTTCTCCTTAAACAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA
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