CK935471
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 42/132 (31.82%), Postives = 62/132 (46.97%), Query Frame = 3 Query: 15 EKGENNAVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWI 410 E G +TA GRT+P +GF+F NCL+ GT +LGRPW+ YSR +F + NL +V P+GW W+ L + E G G+ RV W ++ + + +FI W+ Sbjct: 210 EPGLAGYITAQGRTNPYDANGFIFINCLVYGTG-------------MAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKWVKKLSESAIQNLADLSFINRGGWV 328
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13 Identity = 37/125 (29.60%), Postives = 63/125 (50.40%), Query Frame = 3 Query: 36 VTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWI 410 + AH + SG+ F +C + GT + YLGR W + + V+ + + ++V+P GW KT++YGE++ +GPGS A RVP++ I + N + +IQG +W+ Sbjct: 243 IAAHAGKSAEEKSGYSFVHCKVTGTGGGI------------YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANCFLSLGYIQGSKWL 355
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.024e-13 Identity = 37/125 (29.60%), Postives = 63/125 (50.40%), Query Frame = 3 Query: 36 VTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWI 410 + AH + SG+ F +C + GT + YLGR W + + V+ + + ++V+P GW KT++YGE++ +GPGS A RVP++ I + N + +IQG +W+ Sbjct: 243 IAAHAGKSAEEKSGYSFVHCKVTGTGGGI------------YLGRAWMSHPKVVYAYTEMTSVVNPTGWQENKTPAHDKTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWL 355
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.864e-13 Identity = 39/126 (30.95%), Postives = 61/126 (48.41%), Query Frame = 3 Query: 33 AVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWI 410 ++TAH R + +G+VF + G +E YLGR YSR +F L V PDGW WS + + LY+GE++ GPG++ R W+ + + V ++ +FI G W+ Sbjct: 224 SITAHHRESAEEKTGYVFIRGKVYGIDEV-------------YLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWAKDLTKQEVESFLSIDFIDGTSWL 336
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.529e-12 Identity = 36/125 (28.80%), Postives = 60/125 (48.00%), Query Frame = 3 Query: 36 VTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWI 410 +TA GR + +G+ F +C + GT + YLGR W + + V+ + ++V+P GW KT++YGE++ GPGS RVP++ I V + +I+G W+ Sbjct: 243 ITAQGRQSATEQNGYTFVHCKVTGTGTGI------------YLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFGPGSHLEKRVPYTQDIDKNEVTPFLTLGYIKGSTWL 355
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12 Identity = 40/126 (31.75%), Postives = 58/126 (46.03%), Query Frame = 3 Query: 36 VTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWIS 413 +TA GR P GFVF++C + G+ K LGR WK YSR +F + P GW W + + EF TG G+ T+ RVPW ++ + V ++ FI + W+S Sbjct: 221 ITAQGRDSPTDKGGFVFKDCTVMGSG-------------KALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPWLTKASEKDVLQFTNLTFIDEEGWLS 333
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.449e-12 Identity = 38/128 (29.69%), Postives = 60/128 (46.88%), Query Frame = 3 Query: 33 AVTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDF-ALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWIS 413 ++ AHGRT P + +GF F C + GT Y+GR +YSR V+ + +ALV GW W KT ++G + GPG+ V W+ + E + + ++F+ G WI+ Sbjct: 244 SIAAHGRTCPEEKTGFAFVGCRVTGTGPL-------------YVGRAMGQYSRIVYAYTYFDALVAHGGWDDWDHKSNKSKTAFFGVYNCYGPGAAATRGVSWARALDYESAHPFIAKSFVNGRHWIA 358
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.589e-12 Identity = 37/125 (29.60%), Postives = 61/125 (48.80%), Query Frame = 3 Query: 36 VTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWI 410 +TA+G+ +GFVF NC I G+ +LGR W+ Y+R +F + +V DGW +T+YYGE + GPG+ + RV ++ + ++ +FI G+EW+ Sbjct: 222 ITANGKDTLKDRTGFVFVNCKITGSARV-------------WLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRVTYAKLLSDVEAAPFTNISFIDGEEWL 333
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.208e-11 Identity = 34/125 (27.20%), Postives = 60/125 (48.00%), Query Frame = 3 Query: 36 VTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWI 410 + AH R + +G+ F +C + G + YLGR W + + V+ + + ++V+P GW KT++YGE+ TGPGS A RV + I + + + +I+G +W+ Sbjct: 243 IAAHNRQSTTEQNGYSFVHCKVTGVGTGI------------YLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFYGEYMCTGPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWL 355
BLAST of CK935471 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.884e-11 Identity = 36/125 (28.80%), Postives = 60/125 (48.00%), Query Frame = 3 Query: 36 VTAHGRTDPAQWSGFVFQNCLINGTEEYMKLYYSKPRVHKNYLGRPWKEYSRTVFIHCNLEALVHPDGWLPWSGDFALKTLYYGEFQNTGPGSKTANRVPWSSQIPAEHVNAYSVQNFIQGDEWI 410 +TAH A+ SG+ F +C + GT + YLGR W + + V+ + ++ ++V+P GW KT++YGE++ TG GS RV ++ I + +IQG W+ Sbjct: 220 ITAHAGKSAAEKSGYSFVHCKVTGTGTGI------------YLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRDKTVFYGEYKCTGTGSHKEKRVKYTQDIDDIEAKYFISLGYIQGSSWL 332 The following BLAST results are available for this feature:
BLAST of CK935471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935471 ID=CK935471; Name=CK935471; organism=Citrus sinensis; type=EST; length=820bpback to top |