CK935488
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935488 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 1.267e-37 Identity = 75/113 (66.37%), Postives = 90/113 (79.65%), Query Frame = 3 Query: 129 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 464 M ++DSQ+PT++DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ +V KD IKIHGF Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CK935488 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.816e-37 Identity = 76/115 (66.09%), Postives = 89/115 (77.39%), Query Frame = 3 Query: 129 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 464 M D+D QIPT++DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CK935488 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.816e-37 Identity = 76/115 (66.09%), Postives = 89/115 (77.39%), Query Frame = 3 Query: 129 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 464 M D+D QIPT++DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CK935488 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.816e-37 Identity = 76/115 (66.09%), Postives = 89/115 (77.39%), Query Frame = 3 Query: 129 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 464 M D+D QIPT++DPFA+ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CK935488 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.816e-37 Identity = 74/113 (65.49%), Postives = 89/113 (78.76%), Query Frame = 3 Query: 129 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 464 M D++ Q+PT++DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ +V KD IKIHGF Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
BLAST of CK935488 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.290e-37 Identity = 76/113 (67.26%), Postives = 90/113 (79.65%), Query Frame = 3 Query: 129 MVDIDSQIPTSYDPFADIKDSLAPGD-KGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 464 MVD D QIPTS+DPFA+ + + A G K YVH+R+QQRNG+K LTTVQGLK++ Y KILKDLKK CCNG VVNDK LGKVIQLQGD RKNV F+V++ IV KD+IK+H F Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113
BLAST of CK935488 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.290e-37 Identity = 74/113 (65.49%), Postives = 90/113 (79.65%), Query Frame = 3 Query: 129 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 464 M ++DSQ+PT++DPFAD + G K YVH+RVQQRNG+K LTTVQGLK+++ Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ +V KD I+IHGF Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDDIQIHGF 113
BLAST of CK935488 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.073e-36 Identity = 75/115 (65.22%), Postives = 89/115 (77.39%), Query Frame = 3 Query: 129 MVDIDSQIPTSYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 464 M D+D QIPT++DPF++ A G K YVH+R+QQRNG+K LTTVQGLK++F Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
BLAST of CK935488 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.077e-36 Identity = 74/113 (65.49%), Postives = 88/113 (77.88%), Query Frame = 3 Query: 129 MVDIDSQIPTSYDPFADIK-DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 464 M + D+ IPT++DPFA+ + G K YVH+RVQQRNG+K LTTVQGLK+D+ Y KILKDLKKEFCCNG VV D LG+VIQLQGD RKNV FLV++ IV K+ IKIHGF Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
BLAST of CK935488 vs. ExPASy Swiss-Prot
Match: EIF1_PONAB (Eukaryotic translation initiation factor 1 OS=Pongo abelii GN=EIF1 PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.238e-25 Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 3 Query: 159 SYDPFADIK---DSLAPGDKGYVHLRVQQRNGKKCLTTVQGLKEDFGYQKILKDLKKEFCCNGNVVNDKVLGKVIQLQGDHRKNVMIFLVKSKIVDKDRIKIHGF 464 S+DPFAD D L G + Y+H+R+QQRNG+K LTTVQG+ +D+ +K++K KK+F CNG V+ G+VIQLQGD RKN+ FLV+ + D++K+HGF Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEIGLAKDDQLKVHGF 113 The following BLAST results are available for this feature:
BLAST of CK935488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935488 ID=CK935488; Name=CK935488; organism=Citrus sinensis; type=EST; length=673bpback to top |