CK935502
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935502 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.613e-31 Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 482 S A +R+ ++ K LQ+DPP S P +++ W A I GP +PF G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 2 STPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138
BLAST of CK935502 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.613e-31 Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 482 S A +R+ ++ K LQ+DPP S P +++ W A I GP +PF G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 2 STPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138
BLAST of CK935502 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.613e-31 Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 482 S A +R+ ++ K LQ+DPP S P +++ W A I GP +PF G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 2 STPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138
BLAST of CK935502 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.719e-31 Identity = 67/147 (45.58%), Postives = 96/147 (65.31%), Query Frame = 3 Query: 90 RINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 518 R+ +EL+ L K+PP +M +A I+G S SP+ GG+F + I P YPF+PPK+ F T ++HPNI+S G ICLDIL K W PAL IS VL SI L+++PNPDDPL+ +I+ +K +RA + + A+ WT+K+A+ Sbjct: 6 RLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRFLTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEFKYNRAVFFSNAKKWTEKHAL 152
BLAST of CK935502 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.163e-31 Identity = 63/148 (42.57%), Postives = 88/148 (59.46%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 500 S + KR+ ++ K L DPP S P AD++ W A I GP+D+PF G F + + F YP KPP V F +K+FHPN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPNP+ P E A +Y+ + +Y T SW Sbjct: 2 STPSKKRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNPNSPANAEAASLYRENMKEYVRRVKATVEASW 149
BLAST of CK935502 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.163e-31 Identity = 64/149 (42.95%), Postives = 93/149 (62.42%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWT 503 S A +R+ ++ K LQ DPPA S P+ +++ WQA I GP DS + G F +S+ F +YP P V F +K+FHPN+ ++GSICLDIL+ QWSP I+ +L SI SLL DPNP+ P E A +++ ++ +Y E +SW+ Sbjct: 2 STAARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKFLSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKEIVEQSWS 150
BLAST of CK935502 vs. ExPASy Swiss-Prot
Match: UBC2_SCHPO (Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe GN=rhp6 PE=1 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 8.049e-31 Identity = 62/148 (41.89%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 500 S A +R+ ++ K +Q+DPPA SA PV+D++ W A I+GP+D+PF G F + + F YP KPP V F + +FHPN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPN P E A +++ ++ +Y +T SW Sbjct: 2 STTARRRLMRDFKRMQQDPPAGVSASPVSDNVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRKTVEDSW 149
BLAST of CK935502 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.373e-30 Identity = 60/148 (40.54%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 500 S A +R+ ++ K +++D P SA P+ D++ W A I+GP+D+P+ G F + + F DYP KPP V F +++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K +++Y ET +SW Sbjct: 2 STPARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETVEKSW 149
BLAST of CK935502 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.995e-30 Identity = 59/148 (39.86%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 500 S A +R+ ++ K +++D P SA P+ D++ W A I+GP+D+P+ G F + + F +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K +++Y ET +SW Sbjct: 2 STPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSW 149
BLAST of CK935502 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.995e-30 Identity = 59/148 (39.86%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 72 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 500 S A +R+ ++ K +++D P SA P+ D++ W A I+GP+D+P+ G F + + F +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K +++Y ET +SW Sbjct: 2 STPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSW 149 The following BLAST results are available for this feature:
BLAST of CK935502 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935502 ID=CK935502; Name=CK935502; organism=Citrus sinensis; type=EST; length=741bpback to top |