CK935520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARFRP_RAT (ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus GN=Arfrp1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.690e-16 Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 36 TIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLK--NRKWHIQGTCALKGDGLYEGLDWL 413 T+G N+ V WD+GGQE+L+ LW Y+ G+IYV+DS D ER+ ++K+ F+ ++ + ILV ANKQD++ ++ ++ K R Q AL G G+ EG++W+ Sbjct: 56 TVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIGRRDCLTQACSALTGKGVREGIEWM 183
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARFRP_MOUSE (ADP-ribosylation factor-related protein 1 OS=Mus musculus GN=Arfrp1 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.690e-16 Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 36 TIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLK--NRKWHIQGTCALKGDGLYEGLDWL 413 T+G N+ V WD+GGQE+L+ LW Y+ G+IYV+DS D ER+ ++K+ F+ ++ + ILV ANKQD++ ++ ++ K R Q AL G G+ EG++W+ Sbjct: 56 TVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKEAFEKVVSSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCTCKIGRRDCLTQACSALTGKGVREGIEWM 183
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARFRP_BOVIN (ADP-ribosylation factor-related protein 1 OS=Bos taurus GN=ARFRP1 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.820e-16 Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 3 Query: 36 TIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLG--LFDLKNRKWHIQGTCALKGDGLYEGLDWL 413 T+G N+ V WD+GGQE+L+ LW Y+ G+IYV+DS D ER+ ++KQ F+ ++ + ILV ANKQD++ ++ ++ + R Q AL G G+ EG++W+ Sbjct: 56 TVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKQAFEKMVTSEALDGVPILVLANKQDVETCLSIPDIKTAFSDCASKIGRRDCLTQACSALTGKGVREGIEWM 183
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: AR13B_DANRE (ADP-ribosylation factor-like protein 13B OS=Danio rerio GN=arl13b PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.074e-15 Identity = 44/144 (30.56%), Postives = 79/144 (54.86%), Query Frame = 3 Query: 21 LSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRK---WHIQGTCALKGDG------LYEGLDWLASTL 425 L PT+GF+ ++ T++D+GG +++R +W++Y++ + G+++VVDS D +RI + + +++ P + +LV ANKQD GAM ++ E L L L N I+ A+ G G + GL+WL + + Sbjct: 47 LDVAPTVGFSKVDLKQGKFEVTIFDLGGGKRIRGIWKNYYSESYGVVFVVDSSDVQRIQETRDTMAEVLRHPRIAGKPVLVLANKQDQDGAMAEADIIETLSLEKLVNENKCLCQIEPCSAVLGYGKKVDKSIKNGLNWLLNNI 190
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL3_YEAST (ADP-ribosylation factor-like protein 3 OS=Saccharomyces cerevisiae GN=ARL3 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.392e-15 Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNV-IFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF--DLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 PT+G NV + + I WDVGGQE LR +W Y++ G+I++VDS DRER+ + Q+++ D + IL+ ANKQD + M ++ E + R + AL G+G+ + ++W+ L+ Sbjct: 53 PTVGQNVATIPVDSKQILKFWDVGGQESLRSMWSEYYSLCHGIIFIVDSSDRERLDECSTTLQSVVMDEEIEGVPILMLANKQDRQDRMEVQDIKEVFNKIAEHISARDSRVLPISALTGEGVKDAIEWMIVRLE 187
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: AR13B_MOUSE (ADP-ribosylation factor-like protein 13B OS=Mus musculus GN=Arl13b PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.090e-15 Identity = 46/136 (33.82%), Postives = 77/136 (56.62%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRK---WHIQGTCALKGDG------LYEGLDWL 413 PT+GF+ ++ T++D+GG +++R +W++Y+ + G+I+VVDS D ER+ + K+ +++ P + ILV ANKQD +GA+ +V E L L L N I+ A+ G G + +GL WL Sbjct: 51 PTVGFSKIDLRQGKFQVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAVLGYGKKIDKSIKKGLYWL 186
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: AR13B_HUMAN (ADP-ribosylation factor-like protein 13B OS=Homo sapiens GN=ARL13B PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.550e-14 Identity = 46/136 (33.82%), Postives = 76/136 (55.88%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRK---WHIQGTCALKGDG------LYEGLDWL 413 PT+GF+ ++ T++D+GG ++R +W++Y+ + G+I+VVDS D ER+ + K+ +++ P + ILV ANKQD +GA+ +V E L L L N I+ A+ G G + +GL WL Sbjct: 51 PTVGFSKINLRQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKIDKSIKKGLYWL 186
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF_ENCCU (ADP-ribosylation factor OS=Encephalitozoon cuniculi GN=ARF-1 PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 3.454e-14 Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 12 GEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNS--VILVFANKQDM 284 GEV TVPT+GFN E V ++ F VWD+GGQ W Y N G+IY+VD D +R GK+ +E I+ +LNS +LV ANK D+ Sbjct: 48 GEVHQTVPTLGFNCENVTLGSMKFQVWDIGGQNSFMRFWHQYINEGCGIIYMVDCADPQRFGKSGEELWRILN---ILNSPRPLLVLANKIDL 137
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.988e-13 Identity = 40/108 (37.04%), Postives = 66/108 (61.11%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAII-KDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRK 350 VPT GFN ++ KN + ++G + LR W+ + N D L+++VDS DR R+ A+QE Q ++ +DP + +++ ANKQD+ GAM +E+ + LGL N++ Sbjct: 106 VPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDP---DLPVVIVANKQDLSGAMNMVELQQELGLLASYNQR 210
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1_SCHPO (Small COPII coat GTPase sar1 OS=Schizosaccharomyces pombe GN=sar1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.111e-12 Identity = 43/138 (31.16%), Postives = 67/138 (48.55%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKN----------RKWHIQGTCALKGDGLYEGLDWLA 416 PT+ E++ NV FT +D+GG ++ R LWR YF +G++Y+VD D ER+ ++K E A++ + L+ NK D GA++ E+ LGL+ R + + G EG WLA Sbjct: 50 PTLHPTSEELAIGNVRFTTFDLGGHQQARRLWRDYFPEVNGIVYLVDCCDFERLSESKAELDALLAMEELARVPFLILGNKIDAPGAISEDELKAALGLYQTTGKGVSKPVPGIRPIEVFMCSVVLRQGYGEGFKWLA 187 The following BLAST results are available for this feature:
BLAST of CK935520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935520 ID=CK935520; Name=CK935520; organism=Citrus sinensis; type=EST; length=795bpback to top |