CK935520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1_PICPG (Small COPII coat GTPase SAR1 OS=Pichia pastoris (strain GS115) GN=SAR1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.451e-12 Identity = 45/138 (32.61%), Postives = 73/138 (52.90%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDL--KNRKWHIQG-------TCAL-KGDGLYEGLDWLA 416 PT E++ NV FT +D+GG E+ R +W+ YF DG++Y+VD D ER +++ E A++K + +LV NK D A++ E+ LGL K++ ++G TC++ G EG+ WL+ Sbjct: 50 PTWHPTSEELSIGNVRFTTFDLGGHEQARRVWKDYFPEVDGIVYLVDIADPERFEESRVELDALLKIEELSKVPVLVLGNKIDKSTAVSENELRHALGLMTTTGKDKVQLVEGQRPLEVFTCSIYLRQGYGEGIRWLS 187
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.475e-12 Identity = 33/100 (33.00%), Postives = 59/100 (59.00%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF 332 PT+ E++ V FT +D+GG ++ R LW+ YF DG++++VD+ D ER +A+ E A++ + + L+ NK D GA++ E+ + +GL+ Sbjct: 50 PTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLY 149
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.233e-12 Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF 332 PT+ E++ NV FT +D+GG + R LWR YF DG++++VDS D ER ++K E +++ + L+ NK D GA++ ++ LGL+ Sbjct: 50 PTLHPTSEELAIGNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAELDSLLSIESLAQVPFLILGNKIDAYGAVSEEQLRHELGLY 149
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1_PICST (Small COPII coat GTPase SAR1 OS=Pichia stipitis GN=SAR1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12 Identity = 39/138 (28.26%), Postives = 71/138 (51.45%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLK----------NRKWHIQGTCALKGDGLYEGLDWLA 416 PT+ E++ +V FT +D+GG ++ R LW+ YF +G++++VD+ D ER ++K E +++ K + + L+ NK D+ A+ ME+ LGL++ +R + + G EG WL+ Sbjct: 50 PTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELSHVPFLILGNKIDVPTAVGEMELKSALGLYNTTGKDTGKLPEGSRPIEVYMVSVVMRSGYGEGFKWLS 187
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1A_PONAB (GTP-binding protein SAR1a OS=Pongo abelii GN=SAR1A PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12 Identity = 41/141 (29.08%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG E+ R +W++Y +G++++VD D R+ ++K E A++ D + N IL+ NK D A++ ++ E GL+ +L R + LK G EG WL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLS 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.222e-12 Identity = 41/141 (29.08%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG E+ R +W++Y +G++++VD D R+ ++K E A++ D + N IL+ NK D A++ ++ E GL+ +L R + LK G EG WL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLS 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.514e-12 Identity = 33/101 (32.67%), Postives = 60/101 (59.41%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFD 335 PT+ E++ +V FT +D+GG ++ R LW+ YF +G++++VD+ D ER ++K E +++ K + + L+ NK D A+ ME+ LGL++ Sbjct: 50 PTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILGNKIDASSAVGEMELKSALGLYN 150
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.514e-12 Identity = 41/141 (29.08%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG E+ R +W++Y +G++++VD D R+ ++K E A++ D + N IL+ NK D A++ ++ E GL+ +L R + LK G EG WL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLS 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.514e-12 Identity = 41/141 (29.08%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG E+ R +W++Y +G++++VD D R+ ++K E A++ D + N IL+ NK D A++ ++ E GL+ +L R + LK G EG WL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLS 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.514e-12 Identity = 35/87 (40.23%), Postives = 54/87 (62.07%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYF-NNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMK 287 +PT GFNVE + + V F +WD+GG+E R +RHY + D +I+V DS D + ++K+E+Q + + N L+ ANKQD+K Sbjct: 57 IPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLK 143 The following BLAST results are available for this feature:
BLAST of CK935520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935520 ID=CK935520; Name=CK935520; organism=Citrus sinensis; type=EST; length=795bpback to top |