CK935520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.202e-12 Identity = 40/141 (28.37%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG + R +W++Y +G++++VD D ER+ ++K+E +++ D + N IL+ NK D A++ + E GL+ +L R + LK G EG W+A Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMA 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.202e-12 Identity = 40/141 (28.37%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG + R +W++Y +G++++VD D ER+ ++K+E +++ D + N IL+ NK D A++ + E GL+ +L R + LK G EG W+A Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMA 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.202e-12 Identity = 40/141 (28.37%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG + R +W++Y +G++++VD D ER+ ++K+E +++ D + N IL+ NK D A++ + E GL+ +L R + LK G EG W+A Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSISLKELNARPLEVFMCSVLKRQGYGEGFRWMA 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.202e-12 Identity = 40/141 (28.37%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG + R +W++Y +G++++VD D ER+ ++K+E +++ D + N IL+ NK D A++ + E GL+ +L R + LK G EG W+A Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGNVSLKELNARPLEVFMCSVLKRQGYGEGFRWMA 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.202e-12 Identity = 41/141 (29.08%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG E+ R +W++Y +G++++VD D R+ ++K E A++ D + N IL+ NK D A++ ++ E GL+ +L R + LK G EG WL+ Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLS 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.406e-12 Identity = 40/141 (28.37%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG + R +W++Y +G++++VD D ER+ ++K+E +++ D + N IL+ NK D A++ + E GL+ +L R + LK G EG W+A Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMA 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.406e-12 Identity = 40/141 (28.37%), Postives = 71/141 (50.35%), Query Frame = 3 Query: 30 VPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLF------------DLKNRKWHIQGTCALKGDGLYEGLDWLA 416 VPT+ E++ + FT +D+GG + R +W++Y +G++++VD D ER+ ++K+E +++ D + N IL+ NK D A++ + E GL+ +L R + LK G EG W+A Sbjct: 54 VPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMA 194
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.228e-11 Identity = 42/137 (30.66%), Postives = 71/137 (51.82%), Query Frame = 3 Query: 54 EKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQ--GT---------CAL-KGDGLYEGLDWLASTLK 428 E++ N+ F +D+GG + R +WR Y+ D ++Y+VD+ DRER +AK+E ++ D + N L+ NK D+ A + E+ LGL + K +I GT C++ + G EG W++ +K Sbjct: 57 EELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVTTGKGNINLAGTNVRPIEVFMCSIVRKMGYGEGFKWMSQYIK 193
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1_PICGU (Small COPII coat GTPase SAR1 OS=Pichia guilliermondii GN=SAR1 PE=3 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.228e-11 Identity = 39/139 (28.06%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLK----------NRKWHIQGTCALKGDGLYEGLDWLAS 419 PT+ E++ +V FT +D+GG ++ R LW+ YF +G++++VD+ D ER+ ++K E +++ + + L+ NK D A+ ME+ LGL++ R + + G EG WL+S Sbjct: 50 PTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAELESLFRIEELSQVPFLILGNKIDKSTAIGEMELKSALGLYNTTGKDVTKLPEGQRPIEVFMVSVVMRMGYGEGFKWLSS 188
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.228e-11 Identity = 40/137 (29.20%), Postives = 71/137 (51.82%), Query Frame = 3 Query: 33 PTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNR-KWHIQG--------TCALKGDGLYEGLDWLA 416 PT+ E++ NV FT +D+GG + R LWR YF G++++VD+ D ER+ ++K E A++ + N+ ++ NK D A++ ++ LGL+ + K ++G + G EG+ WL+ Sbjct: 46 PTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKNTPFVILGNKIDHPEAVSEDQLRATLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYGEGIRWLS 182 The following BLAST results are available for this feature:
BLAST of CK935520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935520 ID=CK935520; Name=CK935520; organism=Citrus sinensis; type=EST; length=795bpback to top |