CK935520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 6.454e-45 Identity = 81/140 (57.86%), Postives = 106/140 (75.71%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 +G+ ++T+PT+GFNVE V YKNV F VWDVGGQ+K+RPLWRHY+ T GLI+VVD DR+RI +A+QE II D M +++IL+FANKQD+ AM P E+ E LGL +++R W++Q +CA GDGLYEGL WL S K Sbjct: 35 LGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK 174
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 6.454e-45 Identity = 81/140 (57.86%), Postives = 106/140 (75.71%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 +G+ ++T+PT+GFNVE V YKNV F VWDVGGQ+K+RPLWRHY+ T GLI+VVD DR+RI +A+QE II D M +++IL+FANKQD+ AM P E+ E LGL +++R W++Q +CA GDGLYEGL WL S K Sbjct: 35 LGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK 174
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 6.454e-45 Identity = 81/140 (57.86%), Postives = 106/140 (75.71%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 +G+ ++T+PT+GFNVE V YKNV F VWDVGGQ+K+RPLWRHY+ T GLI+VVD DR+RI +A+QE II D M +++IL+FANKQD+ AM P E+ E LGL +++R W++Q +CA GDGLYEGL WL S K Sbjct: 35 LGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK 174
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 6.454e-45 Identity = 81/140 (57.86%), Postives = 106/140 (75.71%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 +G+ ++T+PT+GFNVE V YKNV F VWDVGGQ+K+RPLWRHY+ T GLI+VVD DR+RI +A+QE II D M +++IL+FANKQD+ AM P E+ E LGL +++R W++Q +CA GDGLYEGL WL S K Sbjct: 35 LGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK 174
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF4_PONAB (ADP-ribosylation factor 4 OS=Pongo abelii GN=ARF4 PE=2 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 6.454e-45 Identity = 80/141 (56.74%), Postives = 110/141 (78.01%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLKE 431 +GE+++T+PTIGFNVE V+YKN+ FTVWDVGGQ+++RPLW+HYF NT GLI+VVDS DRERI + E Q ++ + ++V+L+FANKQD+ AM E+ + LGL L+NR W++Q TCA +G GLYEGLDWL++ L + Sbjct: 39 LGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSK 179
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF4_HUMAN (ADP-ribosylation factor 4 OS=Homo sapiens GN=ARF4 PE=1 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 6.454e-45 Identity = 80/141 (56.74%), Postives = 110/141 (78.01%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLKE 431 +GE+++T+PTIGFNVE V+YKN+ FTVWDVGGQ+++RPLW+HYF NT GLI+VVDS DRERI + E Q ++ + ++V+L+FANKQD+ AM E+ + LGL L+NR W++Q TCA +G GLYEGLDWL++ L + Sbjct: 39 LGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSK 179
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3) HSP 1 Score: 180.644 bits (457), Expect = 8.429e-45 Identity = 81/140 (57.86%), Postives = 106/140 (75.71%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 +G+ ++T+PT+GFNVE V YKNV F VWDVGGQ+K+RPLWRHY+ T GLI+VVD DR+RI +A+QE II D M +++IL+FANKQD+ AM P E+ E LGL +++R W++Q +CA GDGLYEGL WL S K Sbjct: 35 LGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGLTWLTSNYK 174
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF6_XENLA (ADP-ribosylation factor 6 OS=Xenopus laevis GN=arf6 PE=2 SV=2) HSP 1 Score: 180.259 bits (456), Expect = 1.101e-44 Identity = 81/140 (57.86%), Postives = 106/140 (75.71%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 +G+ ++T+PT+GFNVE V YKNV F VWDVGGQ+K+RPLWRHY+ T GLI+VVD DR+RI +A+QE II D M +++IL+FANKQD+ AM P E+ E LGL +++R W++Q +CA GDGLYEGL WL S K Sbjct: 35 LGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCPDRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCAASGDGLYEGLTWLTSNYK 174
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 3.203e-44 Identity = 77/139 (55.40%), Postives = 108/139 (77.70%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTL 425 +GE+++T+PTIGFNVE V+Y+ + FTVWDVGGQ+K+RPLWRHYF NT GLI+VVDS DR+R+ +A+ E ++ + + ++V+LVFANKQD+ AM E+ + GL L+ R W+IQ TCA G+GLYEGLDWL++ + Sbjct: 39 LGEIVTTIPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 177
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 4.183e-44 Identity = 82/142 (57.75%), Postives = 109/142 (76.76%), Query Frame = 3 Query: 3 VHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + +GEV+ST+PTIGFNVE VQY N+ F VWD+GGQ +RP WR YF NT +IYVVDS D +RIG AK+EF AI+++ + +V+L+FANKQD+ GA+ V E L L +K+R+W I TCA+KG+GL+EGLDWL++TLK Sbjct: 37 LQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLK 178 The following BLAST results are available for this feature:
BLAST of CK935520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK935520 ID=CK935520; Name=CK935520; organism=Citrus sinensis; type=EST; length=795bpback to top |