CK935520
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3) HSP 1 Score: 178.333 bits (451), Expect = 4.183e-44 Identity = 82/142 (57.75%), Postives = 109/142 (76.76%), Query Frame = 3 Query: 3 VHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + +GEV+ST+PTIGFNVE VQY N+ F VWD+GGQ +RP WR YF NT +IYVVDS D +RIG AK+EF AI+++ + +V+L+FANKQD+ GA+ V E L L +K+R+W I TCA+KG+GL+EGLDWL++TLK Sbjct: 37 LQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLK 178
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF_GIALA (ADP-ribosylation factor OS=Giardia lamblia PE=3 SV=3) HSP 1 Score: 176.407 bits (446), Expect = 1.590e-43 Identity = 82/138 (59.42%), Postives = 106/138 (76.81%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRE--RIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLA 416 +GEV++TVPTIGFNVE V+YKN+ FTVWDVGGQ+ +RPLWRHY+ NTD LIYV+DS D E RI AK E ++ + + ++ +LVFANKQD+ AM+ ++ E LGL +LK R W+IQ TCA GDGLY+GLDWL+ Sbjct: 39 LGEVVTTVPTIGFNVETVEYKNINFTVWDVGGQDSIRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNELHTLLGEDELRDAALLVFANKQDLPKAMSTTDLTERLGLQELKKRDWYIQPTCARSGDGLYQGLDWLS 176
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3) HSP 1 Score: 174.866 bits (442), Expect = 4.625e-43 Identity = 84/157 (53.50%), Postives = 110/157 (70.06%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTL--KEMRAAGYSSVGTSSF 473 +GEV++TVPTIGFN+E V+YK + FTVWD+GGQEK+R LWRHYF N GLI+VVDS D ER+ +A+ E I+ D + + +LVFANKQD + A+ EV LGL L R W IQGT A+ G GLYEGL+WL++T+ K R+ SS + S+ Sbjct: 39 LGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNELEGACVLVFANKQDSRNALPVAEVANKLGLHSLSKRCWLIQGTSAISGQGLYEGLEWLSTTIPNKPERSTSVSSFRSDSY 195
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 1.030e-42 Identity = 79/140 (56.43%), Postives = 104/140 (74.29%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 +G+ ++T+PT+GFNVE V YKNV F VWDVGGQ+K+RPLWRHY+ T GLI+VVD DR+RI +A+ E II D M +++IL+FANKQD+ AM P E+ E LGL +++R W++Q +CA GDGL EGL WL S K Sbjct: 35 LGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGLIWLTSNHK 174
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL1_RAT (ADP-ribosylation factor-like protein 1 OS=Rattus norvegicus GN=Arl1 PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.488e-41 Identity = 79/142 (55.63%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 3 VHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + +GEV++T+PTIGFNVE V YKN+ F VWD+GGQ +RP WR Y++NTD +IYVVDS DR+RIG +K E A++++ + ++++VFANKQDM+ AMTP E+ LGL LK+RKW I T A KG GL E ++WL TLK Sbjct: 37 LQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL1_MOUSE (ADP-ribosylation factor-like protein 1 OS=Mus musculus GN=Arl1 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.488e-41 Identity = 79/142 (55.63%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 3 VHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + +GEV++T+PTIGFNVE V YKN+ F VWD+GGQ +RP WR Y++NTD +IYVVDS DR+RIG +K E A++++ + ++++VFANKQDM+ AMTP E+ LGL LK+RKW I T A KG GL E ++WL TLK Sbjct: 37 LQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL1_BOVIN (ADP-ribosylation factor-like protein 1 OS=Bos taurus GN=ARL1 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.488e-41 Identity = 79/142 (55.63%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 3 VHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + +GEV++T+PTIGFNVE V YKN+ F VWD+GGQ +RP WR Y++NTD +IYVVDS DR+RIG +K E A++++ + ++++VFANKQDM+ AMTP E+ LGL LK+RKW I T A KG GL E ++WL TLK Sbjct: 37 LQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.488e-41 Identity = 78/140 (55.71%), Postives = 102/140 (72.86%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + + + T+PT+GFNVE V YKN+ F VWDVGGQ+K+RPLWRHYF T GLI+VVDS D RI +A+QE II D M + ++LV ANKQD+ GA++P ++ + L L LK+R W++Q TCAL GDGL EGL WL+ K Sbjct: 43 LNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGLAWLSQNAK 182
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARL1_HUMAN (ADP-ribosylation factor-like protein 1 OS=Homo sapiens GN=ARL1 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.260e-40 Identity = 78/142 (54.93%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 3 VHIGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTLK 428 + +GEV++T+PTIGFNVE V YKN+ F VWD+GGQ +RP WR Y++NTD +IYVVDS DR+RIG +K E A++++ + ++++VFANKQDM+ AMT E+ LGL LK+RKW I T A KG GL E ++WL TLK Sbjct: 37 LQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 178
BLAST of CK935520 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.806e-40 Identity = 71/139 (51.08%), Postives = 104/139 (74.82%), Query Frame = 3 Query: 9 IGEVLSTVPTIGFNVEKVQYKNVIFTVWDVGGQEKLRPLWRHYFNNTDGLIYVVDSLDRERIGKAKQEFQAIIKDPFMLNSVILVFANKQDMKGAMTPMEVCEGLGLFDLKNRKWHIQGTCALKGDGLYEGLDWLASTL 425 +G+V+ST+PTIGFNVE ++YKN+ TVWDVGGQ K+RPLW+HY++ ++ +I+VVDS DRER+ + K+E ++ + + ILVFANKQDM AM E+ L L +K+RKW++Q A++ DG+YEG DW+A++L Sbjct: 47 LGDVVSTIPTIGFNVETIEYKNLSMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFDWVANSL 185 The following BLAST results are available for this feature:
BLAST of CK935520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935520 ID=CK935520; Name=CK935520; organism=Citrus sinensis; type=EST; length=795bpback to top |