CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935524_ssr65 microsatellite CK935524_ssr65:65..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CHLTE (Acetylglutamate kinase OS=Chlorobium tepidum GN=argB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.624e-36
Identity = 81/178 (45.51%), Postives = 107/178 (60.11%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            +L E+LP+I+KF GKT V+KYGGAAMK     N                 + V+VHGGG  I     + G+E  F  G RVTD  T++++ M L G+VN+ +V LINK G  AVG+SG+D     A+PSPN+  LG VGEVA ++   I+ L ++G IPVIA +  D  G  YNINAD
Sbjct:    1 MLVEALPYIRKFEGKTFVIKYGGAAMKDEVLKNIFAENVTLLRKVGI---KVVIVHGGGDAITKTSAKLGLETTFVHGKRVTDRQTVDVIQMTLAGKVNQDIVQLINKDGGNAVGVSGLDADTILAKPSPNASTLGLVGEVAEINTRYIDLLCDAGLIPVIAPIGYDMEGNIYNINAD 175          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_BORPA (Acetylglutamate kinase OS=Bordetella parapertussis GN=argB PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.624e-36
Identity = 89/207 (43.00%), Postives = 121/207 (58.45%), Query Frame = 2
Query:  260 VTDTQTPAEF-----RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR---------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +TDT  PA       +  +LSE+LP+I++F GKTIVVKYGG AM    ++                   PV+VHGGGP+I+  L+R G +  F  G+RVTDA TME+V  VL G+V + +V +IN+ G  AVGL+G DG L  A          PS   D +GFVG++ RV+P V++ L +   IPVI+ +   E G +YNINAD V
Sbjct:    1 MTDTPDPAAVLSPAVKAAVLSEALPYIRRFHGKTIVVKYGGNAMT---EERLQRSFAHDVVLLKLVGLNPVVVHGGGPQIDDALRRIGKQGTFVQGIRVTDAETMEVVEWVLGGQVQQDIVMMINEVGGKAVGLTGKDGMLIQATKKLMVNKDDPSQPLD-IGFVGDITRVEPAVVKALQDDQFIPVISPIGYGEDGTAYNINADVV 203          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_BORBR (Acetylglutamate kinase OS=Bordetella bronchiseptica GN=argB PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.624e-36
Identity = 89/207 (43.00%), Postives = 121/207 (58.45%), Query Frame = 2
Query:  260 VTDTQTPAEF-----RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR---------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +TDT  PA       +  +LSE+LP+I++F GKTIVVKYGG AM    ++                   PV+VHGGGP+I+  L+R G +  F  G+RVTDA TME+V  VL G+V + +V +IN+ G  AVGL+G DG L  A          PS   D +GFVG++ RV+P V++ L +   IPVI+ +   E G +YNINAD V
Sbjct:    1 MTDTPDPAAVLSPAVKAAVLSEALPYIRRFHGKTIVVKYGGNAMT---EERLQRSFAHDVVLLKLVGLNPVVVHGGGPQIDDALRRIGKQGTFVQGMRVTDAETMEVVEWVLGGQVQQDIVMMINEVGGKAVGLTGKDGMLIQATKKLMVNKDDPSQPLD-IGFVGDITRVEPAVVKALQDDQFIPVISPIGYGEDGTAYNINADVV 203          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_MARMS (Acetylglutamate kinase OS=Marinomonas sp. (strain MWYL1) GN=argB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.652e-36
Identity = 84/191 (43.98%), Postives = 113/191 (59.16%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +LSESLP+IQ+F GKT+V+KYGG AM     +N                  P++VHGGGP+I   L +  IE  F +G+RVTD  TM++V MVL G+VNK +V+LI +AG  A+G++G D R   A+            +P    +G VGEVA VD + ++   NS  IPVIA +  D+ G SYNINAD V
Sbjct:   14 VLSESLPYIQRFAGKTLVIKYGGNAMTD---ENLQAGFARDIVLMKAIGINPIVVHGGGPQIGDMLAKLNIESKFINGMRVTDTATMDVVEMVLGGQVNKEIVNLICEAGGKAIGITGKDSRFIKAKKLFVKHQAEGMTAPEQVDIGHVGEVASVDTSFLKFFENSDLIPVIAPIGVDDEGNSYNINADLV 201          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_HYPNA (Acetylglutamate kinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=argB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.652e-36
Identity = 90/202 (44.55%), Postives = 117/202 (57.92%), Query Frame = 2
Query:  269 TQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK-----------LGFVGEVARVDPTVIEPLV--NSGHIPVIASVAADEFGQSYNINADT 835
            TQ+ A+F    LSE+LP+IQ++ G+TIVVKYGG AM      +                  PV+VHGGGP+I   L + GI   F+DGLRVTD  TME+V MVL G +NKS+V  IN+AG  AVGLSG DG L  A  +  + +           LGFVGE + VD +V+  L+  ++  IPV+A V     G  YN+NADT
Sbjct:    3 TQSDAQFTARTLSEALPYIQRYAGQTIVVKYGGHAMGDA---SLALSFARDVVLLKALGLNPVIVHGGGPQIGKLLDKLGIVSEFKDGLRVTDEATMEVVEMVLSGPINKSIVRAINQAGGKAVGLSGADGNLLRAEKATRTTRDPDSHIEQIVDLGFVGEPSEVDISVLNALLQADAALIPVVAPVGVGADGARYNVNADT 201          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_AZOSB (Acetylglutamate kinase OS=Azoarcus sp. (strain BH72) GN=argB PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.652e-36
Identity = 89/207 (43.00%), Postives = 125/207 (60.39%), Query Frame = 2
Query:  248 AATAVTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMK-PNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR---------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +A + T++ TPA  + +IL+E+LP+I++F  KTIV+KYGG AM  P+ KD                   PV+VHGGGP+I   L + G +  F  G+RVTDA TME+V MVL G+VNK +V+LIN+AG  AVGL+G D     A+         P+ +   +G VGE+  +DP++I  L     IPVIA +   + G++YNINAD V
Sbjct:    2 SAASSTESVTPA-LKAEILAEALPYIKRFFDKTIVIKYGGNAMTDPHLKD----CFARDVVLLKLVGLNPVVVHGGGPQIETLLAKVGKKGEFVQGMRVTDAETMEVVEMVLGGQVNKEIVNLINQAGGKAVGLTGKDASFIRAKKLLMQKLDAPAGDVIDVGQVGEITTIDPSLISFLDQGDFIPVIAPIGVGDNGETYNINADVV 203          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SPHWW (Acetylglutamate kinase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=argB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.130e-35
Identity = 86/194 (44.33%), Postives = 113/194 (58.25%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            + + L E+LP++Q++ G+T VVKYGG AM   +                     PV+VHGGGP+I   LK  G+E  F DGLRVTDA T  +  MVL G +NK +VS I +AG  AVGLSG DGR+  A         P  N +K   LGFVGE A +D  VI+ +  +G IPV+A +A  E G +YN+NADT+
Sbjct:   14 KAETLVEALPYMQRYAGETFVVKYGGHAMGDPEAARDFAEDIVLLKAVGI---NPVVVHGGGPQIGKMLKTLGVESRFVDGLRVTDAETARVAEMVLCGSINKEIVSWIAQAGGRAVGLSGKDGRMVVAEKVRRTQRDPDSNIEKAVDLGFVGEPADIDRRVIDTISKAGMIPVVAPIAIGEDGHTYNVNADTM 204          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_RHISN (Acetylglutamate kinase OS=Rhizobium sp. (strain NGR234) GN=argB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.130e-35
Identity = 86/196 (43.88%), Postives = 113/196 (57.65%), Query Frame = 2
Query:  281 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            +E +  +L+++LP++Q++  KTIVVKYGG AM                         P++VHGGGP+I   L + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A         P  N ++   LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINADT
Sbjct:    6 SEIQARLLAQALPYMQRYENKTIVVKYGGHAMG---NPELGRAFASDIALLKQSGVNPIVVHGGGPQIGAMLNKMGIESKFEGGLRVTDEKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKARKTIKDPDSNIERILDLGFVGEVVEVDRTLLDLLARSEMIPVIAPVAPGRDGHTYNINADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PSEPK (Acetylglutamate kinase OS=Pseudomonas putida (strain KT2440) GN=argB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.130e-35
Identity = 84/192 (43.75%), Postives = 114/192 (59.38%), Query Frame = 2
Query:  296 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTD+ TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  AR            +P    +G VGEV  V+  ++  LV    IPVIA +     G+SYNINAD V
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDSATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRARKLTVSRQTPEMTTPEIIDIGHVGEVVSVNTDLLNMLVKGDFIPVIAPIGVGANGESYNINADLV 201          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PSEPG (Acetylglutamate kinase OS=Pseudomonas putida (strain GB-1) GN=argB PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.130e-35
Identity = 84/192 (43.75%), Postives = 114/192 (59.38%), Query Frame = 2
Query:  296 DILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            ++LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTD+ TM++V MVL G+VNK +V+LIN+ G +A+GL+G D  L  AR            +P    +G VGEV  V+  ++  LV    IPVIA +     G+SYNINAD V
Sbjct:   13 EVLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDSATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRARKLTVSRQTPEMTTPEIIDIGHVGEVVSVNTDLLNMLVKGDFIPVIAPIGVGANGESYNINADLV 201          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_CHLTE6.624e-3645.51Acetylglutamate kinase OS=Chlorobium tepidum GN=ar... [more]
ARGB_BORPA6.624e-3643.00Acetylglutamate kinase OS=Bordetella parapertussis... [more]
ARGB_BORBR6.624e-3643.00Acetylglutamate kinase OS=Bordetella bronchiseptic... [more]
ARGB_MARMS8.652e-3643.98Acetylglutamate kinase OS=Marinomonas sp. (strain ... [more]
ARGB_HYPNA8.652e-3644.55Acetylglutamate kinase OS=Hyphomonas neptunium (st... [more]
ARGB_AZOSB8.652e-3643.00Acetylglutamate kinase OS=Azoarcus sp. (strain BH7... [more]
ARGB_SPHWW1.130e-3544.33Acetylglutamate kinase OS=Sphingomonas wittichii (... [more]
ARGB_RHISN1.130e-3543.88Acetylglutamate kinase OS=Rhizobium sp. (strain NG... [more]
ARGB_PSEPK1.130e-3543.75Acetylglutamate kinase OS=Pseudomonas putida (stra... [more]
ARGB_PSEPG1.130e-3543.75Acetylglutamate kinase OS=Pseudomonas putida (stra... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
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