CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935524_ssr65 microsatellite CK935524_ssr65:65..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_NITOC (Acetylglutamate kinase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=argB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.517e-35
Identity = 85/193 (44.04%), Postives = 113/193 (58.55%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARP-------------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +L+ESLP+IQ+F GKT+V+KYGG AM  +   N                  PV++HGGGP+I   L+R G +  F  G+RVTD  TM+IV MVL G+VNK +V+LIN+ G  AVGL+G DG L  A                P    +G VG+V +++  +++ LV S  IPVIA +   E GQSYNINAD V
Sbjct:   14 VLTESLPYIQRFAGKTVVIKYGGNAMVDDDLKNSFSRDVVLMKLVGI---NPVVIHGGGPQIGRLLERVGKQSEFIQGMRVTDKETMDIVEMVLSGQVNKEIVNLINRHGGHAVGLTGKDGTLIHAEKLHLTQDRDDPTINIPEIIDMGHVGKVKQINTRIVDLLVQSDFIPVIAPIGVGENGQSYNINADLV 203          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_MAGSM (Acetylglutamate kinase OS=Magnetococcus sp. (strain MC-1) GN=argB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.517e-35
Identity = 82/194 (42.27%), Postives = 113/194 (58.25%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPS-----------PNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +V +L E+LP++++F GKT V+KYGG AM     ++                  P++VHGGGP+I   +KR G+EP F DGLRVTD +TM +V MVL G+VNK +V+LIN  G  A GLSG DG    AR             P    LG+VG+V R++  +++    S  IPV+A V     G++YNINAD+V
Sbjct:    9 KVKVLIEALPYMRRFEGKTFVIKYGGNAMVD---EDLKSAFAQDVILMRQVGINPIIVHGGGPQIGLIMKRMGLEPKFIDGLRVTDEDTMSVVEMVLAGKVNKDIVNLINLNGGRAAGLSGKDGYTIQARKRTHVRKGPDVQVPEIIDLGWVGDVERIETNLLDRFRASDIIPVVAPVGVGANGETYNINADSV 199          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_LAWIP (Acetylglutamate kinase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=argB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.517e-35
Identity = 86/196 (43.88%), Postives = 111/196 (56.63%), Query Frame = 2
Query:  281 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPS----------PNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            A  R  +L ESLP++QKF+GK IV+KYGG AMK                        P++VHGGGP+I   L R  I+  FR+GLRVTD  TM++V MVL G VNK +V+ +N+AGA AVGLSG DG    A  +          P    LG VG V  ++ +++  L+  G IP+IA V  D   Q+YNINAD V
Sbjct:    6 ARLRSHMLIESLPYLQKFQGKVIVIKYGGHAMKDTLLKQSFAQSIALLNLVGI---HPIVVHGGGPQIGNMLSRLNIQSEFREGLRVTDKATMDVVEMVLAGSVNKEIVNQVNQAGAKAVGLSGKDGAFILAEKNDLILTKENQPPEIINLGNVGRVVHIETSLLYTLIEKGFIPIIAPVGTDN-KQTYNINADEV 197          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CAMC5 (Acetylglutamate kinase OS=Campylobacter curvus (strain 525.92) GN=argB PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.517e-35
Identity = 84/178 (47.19%), Postives = 109/178 (61.24%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            ++  +LP+IQKFR K  VVKYGG+A   +   N                 + V+VHGGG +IN +L R  I+  F DGLRVTD   MEIV MVL G +NK + +L+NK GA A+G+SG D  L  AR   N+ K GFVGE+ RV+  V+  L+ +G IPV+A VA D+   SYNINAD
Sbjct:   10 VIISALPYIQKFRNKIFVVKYGGSAQIDDTLKNDFVRDIALLQLVGC---KVVVVHGGGKKINSYLDRLHIKSEFVDGLRVTDKEAMEIVEMVLSGNINKEITALLNKNGARAIGVSGKDANLLKAR-ILNNGKYGFVGEIERVNTYVLNGLLENGLIPVVAPVATDDEANSYNINAD 183          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SINMW (Acetylglutamate kinase OS=Sinorhizobium medicae (strain WSM419) GN=argB PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.288e-35
Identity = 85/196 (43.37%), Postives = 114/196 (58.16%), Query Frame = 2
Query:  281 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            +E +  +L+++LP++Q++  KTIVVKYGG AM   +                     P++VHGGGP+I   L + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A         P  N ++   LGFVG+V  VD T+++ L  S  IPVIA VA    G +YNINADT
Sbjct:    6 SEIQARLLAQALPYMQRYENKTIVVKYGGHAMGNAELGRAFASDVALLKQSGV---NPIVVHGGGPQIGAMLNKMGIESKFEGGLRVTDEKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKAKKTIRDPDSNIERVLDLGFVGDVVEVDRTLLDLLARSEMIPVIAPVAPGRDGHTYNINADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_RHOCS (Acetylglutamate kinase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=argB PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.288e-35
Identity = 94/211 (44.55%), Postives = 122/211 (57.82%), Query Frame = 2
Query:  236 SLTSAATAVTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            S  S A A +  +  A+ R   LSE+LPF++++ G+T+VVKYGG AM     ++                  PV+VHGGGP+I   L+R  I+  F DGLRVTD  T+EI  MVL G +NK +V+LIN AG  AVGLSG D  L  AR        P  N +K   LGFVG+  RV+P ++  L  +  IPVIA +   E GQ+YNINADT
Sbjct:    2 STPSPAAAPSREEWLAKART--LSEALPFMRRYAGRTVVVKYGGHAMGD---ESLGRRFANDIVLMKQMGISPVVVHGGGPQIGQMLERLKIKSEFVDGLRVTDKETVEIAEMVLSGSINKQIVALINDAGGDAVGLSGKDDDLIEARKVTRSKRDPDSNIEKVIDLGFVGDPFRVNPGLLHKLQQADIIPVIAPIGIGEDGQTYNINADT 207          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_BORPE (Acetylglutamate kinase OS=Bordetella pertussis GN=argB PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.288e-35
Identity = 88/207 (42.51%), Postives = 120/207 (57.97%), Query Frame = 2
Query:  260 VTDTQTPAEF-----RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR---------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +TDT  PA       +  +LSE+LP+I++F GKTIVVKYGG AM    ++                   PV+VHGGGP+I+  L+R G +  F  G+RVTDA TME+V  VL G+V + +V +IN+ G  AVGL+G DG L  A          PS   D +G VG++ RV+P V++ L +   IPVI+ +   E G +YNINAD V
Sbjct:    1 MTDTPDPAAVLSPAVKAAVLSEALPYIRRFHGKTIVVKYGGNAMT---EERLQRSFAHDVVLLKLVGLNPVVVHGGGPQIDDALRRIGKQGTFVQGMRVTDAETMEVVEWVLGGQVQQDIVMMINEVGGKAVGLTGKDGMLIQATKKLMVNKDDPSQPLD-IGLVGDITRVEPAVVKALQDDQFIPVISPIGYGEDGTAYNINADVV 203          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_AGRVS (Acetylglutamate kinase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=argB PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.288e-35
Identity = 89/204 (43.63%), Postives = 118/204 (57.84%), Query Frame = 2
Query:  257 AVTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPS------PNSD-----KLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            + +++QT A     +L+++LPF+Q++  KTIVVKYGG AM   +                     P++VHGGGP+I   L + GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A  +      P+S       LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINADT
Sbjct:    2 SASESQTQAR----LLAQALPFMQRYENKTIVVKYGGHAMGDAELGRAFAADIALLKQSGV---NPIVVHGGGPQIGAMLTKMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKAKKTVIDPDSHIERVLDLGFVGEVVEVDRTLLDLLAKSEMIPVIAPVAPGRDGHTYNINADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SACEN (Acetylglutamate kinase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=argB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 83/197 (42.13%), Postives = 116/197 (58.88%), Query Frame = 2
Query:  260 VTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            V+D  + A  +  +L E+LP++Q+F G T+VVKYGG AM     D                   PV+VHGGGP+I   L+R G++  FR GLRVT   TM++V MVL G+V + LV LIN+ G  AVG+SG D  LFTAR         +  +G VG+V  V+P  +  L+ +G IPV++++A D  G  +N+NADT
Sbjct:    6 VSDRLSTAAEKASVLIEALPWLQRFHGATVVVKYGGNAMID---DELKTAFAQDMVFLRLAGLHPVVVHGGGPQITAMLERLGMQGEFRGGLRVTTPETMDVVRMVLFGQVGRELVGLINQHGPHAVGMSGEDAGLFTARRRTATVDGEAVDVGLVGDVVSVNPDAVLDLIRAGRIPVVSTIAPDPDGVVHNVNADT 199          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_MESSB (Acetylglutamate kinase OS=Mesorhizobium sp. (strain BNC1) GN=argB PE=3 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 89/205 (43.41%), Postives = 116/205 (56.59%), Query Frame = 2
Query:  254 TAVTDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            T +T+T   AE +  +LS +LP++Q++  KT+V+KYGG AM                         P++VHGGGP+I   LKR GIE  F  GLRVTD  T+EIV MVL G +NK +V+LIN  G  A+GL G DG +  A         P  N ++   LGFVGE   VD T+++ L  S  IPV+A VA    G +YNINADT
Sbjct:    2 TEITET---AEAQAALLSAALPYMQRYENKTVVIKYGGHAMGDIALGRAFARDVALLKQSGV---NPIVVHGGGPQIGDMLKRMGIESKFEGGLRVTDQKTVEIVEMVLAGSINKEIVALINAEGEWAIGLCGKDGNMVFAEKARKTVVDPDSNIERVLDLGFVGEPVEVDRTLLDLLARSEMIPVLAPVAPGRDGYTYNINADT 200          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_NITOC2.517e-3544.04Acetylglutamate kinase OS=Nitrosococcus oceani (st... [more]
ARGB_MAGSM2.517e-3542.27Acetylglutamate kinase OS=Magnetococcus sp. (strai... [more]
ARGB_LAWIP2.517e-3543.88Acetylglutamate kinase OS=Lawsonia intracellularis... [more]
ARGB_CAMC52.517e-3547.19Acetylglutamate kinase OS=Campylobacter curvus (st... [more]
ARGB_SINMW3.288e-3543.37Acetylglutamate kinase OS=Sinorhizobium medicae (s... [more]
ARGB_RHOCS3.288e-3544.55Acetylglutamate kinase OS=Rhodospirillum centenum ... [more]
ARGB_BORPE3.288e-3542.51Acetylglutamate kinase OS=Bordetella pertussis GN=... [more]
ARGB_AGRVS3.288e-3543.63Acetylglutamate kinase OS=Agrobacterium vitis (str... [more]
ARGB_SACEN4.294e-3542.13Acetylglutamate kinase OS=Saccharopolyspora erythr... [more]
ARGB_MESSB4.294e-3543.41Acetylglutamate kinase OS=Mesorhizobium sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
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