CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ANADF (Acetylglutamate kinase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=argB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.464e-16
Identity = 57/175 (32.57%), Postives = 80/175 (45.71%), Query Frame = 2
Query:  341 KTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR---------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            KTIV+K GG  +   + D                  R  +VHGGGP+ +   K  G+E     G R TDA T+E++  V+ G++N  L   +   G   VGL G  G +  AR           P    LG VG+V   +  ++  L    ++PVIA +  D  GQ+ NIN DTV
Sbjct:    2 KTIVLKLGGELVHAPELD----VIARDLRVLVDGFNRVAIVHGGGPQASALQKTLGLETRMVAGRRYTDAQTLEVMKYVVAGQLNVDLCGRLLANGVMGVGLHGASGHVVQARRRPPRVMKGAGPEPVDLGLVGDVLGFNLPLLGDLFERRYVPVIACLGCDAQGQALNINGDTV 172          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PSYIN (Acetylglutamate kinase OS=Psychromonas ingrahamii (strain 37) GN=argB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.830e-16
Identity = 56/165 (33.94%), Postives = 87/165 (52.73%), Query Frame = 2
Query:  341 KTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVL-VHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            K +++K GGA ++  Q                    RP+L VHGGG  +   LK+  I    ++GLR+T    +  V+  L G  NK L++   KAG +AVGLS  DG  F+ + +     LG VG  +  +P ++  L+  G++PVI+S+A  + G+ YN+NAD
Sbjct:    6 KPLLIKLGGAVLENEQA---LENLFSALTVYLQTEQRPLLIVHGGGVIVEDVLKKMNIVSYKKEGLRITPFEQIPYVAGALAGTSNKLLMAKALKAGLSAVGLSLADG--FSCKVTQLDPDLGAVGICSPNNPALLNTLLKEGYLPVISSIAIGDDGRLYNVNAD 165          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PELUB (Acetylglutamate kinase OS=Pelagibacter ubique GN=argB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.830e-16
Identity = 53/178 (29.78%), Postives = 89/178 (50.00%), Query Frame = 2
Query:  302 LSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            + E   +++K+  + I++K GG+ +   +                     P++VHGGG  IN  L    I+  F +GLRVTD +T+ IV  VL+   NK +V  +N+    A  ++  +  + T     N D LGFVG    ++   +  ++ +  +PVIA +  D+  Q++NINADT
Sbjct:   20 VEEVKKYLEKYNDEFIIIKCGGSVLVDPK---LFKVFIEDVVVLKKLGFNPIIVHGGGKRINSKLLEVNIKSNFINGLRVTDKDTINIVEDVLI-EFNKEIVEALNELDCKAKRITSKENNIITV-VQENKD-LGFVGRPTGINKEFLTEIIKANKVPVIAPLGLDKDNQTFNINADT 191          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARG56_NEUCR (Protein arg-6, mitochondrial OS=Neurospora crassa GN=arg-6 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.830e-16
Identity = 45/127 (35.43%), Postives = 74/127 (58.27%), Query Frame = 2
Query:  452 PVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            PV+VHG GP++N  L+  G+EP F +G+RVTDA T+ +   + +    +  + L+NK     V    +   +F A    N +K G VG+V  V+   IE  +++G++P++ S+A  + GQ  N+NAD
Sbjct:  112 PVIVHGAGPQLNRLLEDAGVEPQFEEGIRVTDAKTLRVARDLFL----QENLKLVNKLEEMGVHAQPLTTGMFRA-DYLNKEKWGLVGKVTGVNKQAIETAISNGYLPILTSMAETDDGQILNVNAD 233          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_STAAR (Acetylglutamate kinase OS=Staphylococcus aureus (strain MRSA252) GN=argB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.614e-16
Identity = 60/170 (35.29%), Postives = 87/170 (51.18%), Query Frame = 2
Query:  341 KTIVVKYGGAA---MKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEF-GQSYNINADTV 838
            K IV+K GG+    M P+  +N                  P++VHGGGP IN  L    IEP F +GLRVTD  TM I    L+  VN +LV+  N+   +A+GL G+D +LF  +      + G+VG    ++   +  L     +P+I S+  +   G+ YNINADT+
Sbjct:    2 KFIVIKIGGSTLSDMHPSIINNIKHLRSNNIY--------PIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQQQCSAIGLCGLDAQLFEIKRF--DQQYGYVGVPTTLNIDSLSYLCTK-FVPIINSIGFNNHDGEFYNINADTL 160          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_STAAB (Acetylglutamate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=argB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.945e-16
Identity = 60/170 (35.29%), Postives = 87/170 (51.18%), Query Frame = 2
Query:  341 KTIVVKYGGAA---MKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEF-GQSYNINADTV 838
            K IV+K GG+    M P+  +N                  P++VHGGGP IN  L    IEP F +GLRVTD  TM I    L+  VN +LV+  N+   +A+GL G+D +LF  +      + G+VG    ++   +  L     +P+I S+  +   G+ YNINADT+
Sbjct:    2 KFIVIKIGGSTLSDMHPSIINNIKHLRSNNIY--------PIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLFEIKRF--DQQYGYVGVPTTLNIDSLSYLCTK-FVPIINSIGFNNHDGEFYNINADTL 160          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SHESR (Acetylglutamate kinase OS=Shewanella sp. (strain MR-7) GN=argB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.945e-16
Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            ++VHGGG  ++  L   G+E V  +GLRVT    M I++  L G  NK L     KAG  +VG+S  DG   +A+     ++LG VGEV+  D T ++ +++ G +P+ +S+A  + GQ  N+NAD
Sbjct:   41 LMVHGGGCLVDEQLAANGMETVKLEGLRVTPPEQMPIIAGALAGTSNKILQGAATKAGIVSVGMSLADGNTVSAK--IKDERLGLVGEVSPKDATYLKFILSQGWMPICSSIAMMDDGQMLNVNAD 164          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SHESM (Acetylglutamate kinase OS=Shewanella sp. (strain MR-4) GN=argB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.945e-16
Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            ++VHGGG  ++  L   G+E V  +GLRVT    M I++  L G  NK L     KAG  +VG+S  DG   +A+     ++LG VGEV+  D T ++ +++ G +P+ +S+A  + GQ  N+NAD
Sbjct:   41 LMVHGGGCLVDEQLAANGMETVKLEGLRVTPPEQMPIIAGALAGTSNKILQGAATKAGIVSVGMSLADGNTVSAK--IKDERLGLVGEVSPKDATYLKFILSQGWMPICSSIAMMDDGQMLNVNAD 164          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_LISMO (Acetylglutamate kinase OS=Listeria monocytogenes GN=argB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.945e-16
Identity = 54/164 (32.93%), Postives = 82/164 (50.00%), Query Frame = 2
Query:  344 TIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            TIV+K GG A      DN                 + VLVHGGG  I   ++   I    ++GLRVT+  T+E+  MVL+G+V  ++ +   K   + +GL+  D  L  A    ++D LG VG++ +V   +IE L++   I VIA +  +      N+NADT
Sbjct:    4 TIVIKLGGVA-----SDNLTEGFFRQITEWQAANKKIVLVHGGGHYITKMMEALAIPVETKNGLRVTNKATLEVTKMVLIGQVQPAITTAFQKRNISVIGLNASDTGLLEADRLSDTD-LGLVGKITKVKTNLIEQLLSENIITVIAPLGINSEHDWLNVNADT 161          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ANADE (Acetylglutamate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=argB PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.945e-16
Identity = 57/175 (32.57%), Postives = 81/175 (46.29%), Query Frame = 2
Query:  341 KTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLF--TARP-------SPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            KTIV+K GG  +   + D                  R  +VHGGGP+     KR G+E     G R TD  T+E++  V+ G++N  L + +   G   VGL G  G     T RP        P    LG VG+V   +  ++  L    ++PV+A +  D+ GQ+ NIN DTV
Sbjct:    2 KTIVLKLGGEIVHSPELD----LVARDLRTLVDGWNRVAIVHGGGPQATALQKRLGLETRMVAGRRYTDEATLEVMKYVVAGQLNVDLCARLLANGVMPVGLHGASGHAVQATRRPPRVMQGAGPEPVDLGLVGDVVGFNLPLLGDLFERRYVPVLACLGCDDAGQALNINGDTV 172          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_ANADF4.464e-1632.57Acetylglutamate kinase OS=Anaeromyxobacter sp. (st... [more]
ARGB_PSYIN5.830e-1633.94Acetylglutamate kinase OS=Psychromonas ingrahamii ... [more]
ARGB_PELUB5.830e-1629.78Acetylglutamate kinase OS=Pelagibacter ubique GN=a... [more]
ARG56_NEUCR5.830e-1635.43Protein arg-6, mitochondrial OS=Neurospora crassa ... [more]
ARGB_STAAR7.614e-1635.29Acetylglutamate kinase OS=Staphylococcus aureus (s... [more]
ARGB_STAAB9.945e-1635.29Acetylglutamate kinase OS=Staphylococcus aureus (s... [more]
ARGB_SHESR9.945e-1638.10Acetylglutamate kinase OS=Shewanella sp. (strain M... [more]
ARGB_SHESM9.945e-1638.10Acetylglutamate kinase OS=Shewanella sp. (strain M... [more]
ARGB_LISMO9.945e-1632.93Acetylglutamate kinase OS=Listeria monocytogenes G... [more]
ARGB_ANADE9.945e-1632.57Acetylglutamate kinase OS=Anaeromyxobacter dehalog... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
back to top