CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SHEB2 (Acetylglutamate kinase OS=Shewanella baltica (strain OS223) GN=argB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.436e-14
Identity = 47/126 (37.30%), Postives = 71/126 (56.35%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            ++VHGGG  ++  L   G+E V  +GLRVT    M I++  L G  NK L     KAG  +VG+S  DG   +A+     ++LG VGEV   D   ++ ++  G +P+ +S+A  + GQ  N+NAD
Sbjct:   41 LMVHGGGCLVDEQLAANGMETVKLEGLRVTPPEQMPIIAGALAGTSNKILQGAATKAGIVSVGMSLADGNTVSAK--IKDERLGLVGEVTPKDGAYLKFILAQGWMPICSSIAMMDDGQMLNVNAD 164          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PHOPR (Acetylglutamate kinase OS=Photobacterium profundum GN=argB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.436e-14
Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 2
Query:  347 IVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            +V+K GGA +  N  D                    +LVHGGG  ++  +K+  +E + ++GLRVT    +  ++  L G  NK L     K+G  AVGLS  DG L   + +    +LG VG+ A  +  ++  ++ SG++P+++S+  D  G+  N+NAD
Sbjct:    6 LVIKLGGAVLSCN--DTLEKLFTAISAYQASAQRPLLLVHGGGYLVDDLMKKLQLETIKKEGLRVTPKAQIPFIAGALAGTANKMLQGRAIKSGVAAVGLSLADGGL--CQITELDPELGSVGKAAPGNGALVSQIMASGYLPIVSSIGLDANGELMNVNAD 163          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CENSY (Acetylglutamate/acetylaminoadipate kinase OS=Cenarchaeum symbiosum GN=argB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14
Identity = 48/142 (33.80%), Postives = 74/142 (52.11%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDG-----LRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTA-----------RPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            VLVHGGG E+    ++ G EP F         R TD  T EI +MV+ GR+NK +V ++ + G  AVGLSG+DG L  A           R    + + G+ G +  V+  ++E L+  G +PV++ +A     +  N++ D
Sbjct:   31 VLVHGGGKEVTKVCEQLGKEPRFVTSPGNIKSRYTDKETAEIFTMVMSGRINKCIVRMLQQHGVNAVGLSGIDGGLIRAERKSRLVIVNERGRKQAIEGGYTGRITSVNSELLETLLGKGIVPVVSPIAMGNEYELLNVDGD 172          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_AZOPC (Acetylglutamate kinase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=argB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.875e-14
Identity = 40/130 (30.77%), Postives = 66/130 (50.77%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKL--GFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +LVHGGG  +    +   IE    DG RVT    +++  MV  G +NK +V  +   G  A+G +G D  +  +   P  D +  G VG++  ++  ++   +N GH P+ A +  +  GQ  N NAD++
Sbjct:   35 ILVHGGGSMLTELARNLDIETQMIDGRRVTTEKILKLAVMVYAGLINKEIVVGLQALGVDALGFTGADSNIICSEKRPIRDSIDYGLVGDIQEINVQLLNEFLNKGHTPIFAPITHNGGGQLLNTNADSI 164          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_MORAB (Acetylglutamate kinase OS=Moritella abyssi GN=argB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 2
Query:  455 VLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            +LVHGGG  ++  L +  IE   ++GLR+T A+ +  ++   VG  NK L++   K G   VGL+  DG + T   S  +  LG VGE    DPT++  L++ G +P+I+S+  D  G   N+NAD
Sbjct:   44 ILVHGGGCFVDDLLAKMNIESEKKNGLRITPASDIGYITGAYVGTANKVLMAQGIKLGFNVVGLTLADGGISTVTLS--TAGLGAVGECEAGDPTLLTALLSGGFLPIISSIGIDAQGLLLNVNAD 167          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_DEIRA (Acetylglutamate/acetylaminoadipate kinase OS=Deinococcus radiodurans GN=argB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.449e-14
Identity = 60/164 (36.59%), Postives = 79/164 (48.17%), Query Frame = 2
Query:  347 IVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            ++VKYGG AMK                         V+VHGGGP I   L   G+   F  GLRVT    M++V M L  ++NK L   I +A    VGL G D  L  A       +LG VG V  V+  ++  L+ +G  PV+  VA  E G++ N+NADTV
Sbjct:    1 MIVKYGGNAMKSLDLRRAVARELGTLRGAMPL----VVVHGGGPVIERELAARGVASEFIGGLRVTTPEAMDVVEMALC-QLNKQLSQDIGQA----VGLMGRDDELLRAEVL--DPQLGRVGRVTGVNAGLLRTLLGAGLTPVVGCVAVGEDGEALNVNADTV 153          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARG56_SCHPO (Protein arg11, mitochondrial OS=Schizosaccharomyces pombe GN=arg11 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 3.199e-14
Identity = 43/127 (33.86%), Postives = 72/127 (56.69%), Query Frame = 2
Query:  452 PVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            P++VHG GP++N  L    +EP + DG+R+TDA T+ +   V +   N  LV  + K G  A  ++   G +F A    + +K  +VG++ +V+   IE  + +G +P++ S+A    GQ  N+NAD
Sbjct:  124 PIVVHGAGPQLNKILASRNVEPEYSDGIRITDAETLSVARKVFL-EENAKLVDALEKLGTRARPIT---GGVFQAE-YLDKEKYKYVGKIVKVNKAPIEHSIRAGTLPILTSMAETASGQLLNVNAD 245          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_VIBHB (Acetylglutamate kinase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=argB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.178e-14
Identity = 51/162 (31.48%), Postives = 81/162 (50.00%), Query Frame = 2
Query:  347 IVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            +V+K GGAA+   Q                    +  +VHGGG  ++  + +  +E V ++GLRVT    + +++  L G  NK L       G  AVGLS  DG L          +LG VG+ +  D T+++ ++N+G +P+I+S+   E GQ  N+NAD
Sbjct:    9 LVIKLGGAALSCTQ--TLSQLFGAIAAYQKSAQRQIAIVHGGGYLVDELMTKLQLETVKKNGLRVTPYEQIPVIAGALAGTANKLLQGQAIADGLNAVGLSLADGGL--CHVEELDPELGAVGKASPGDSTLLQAVLNAGALPIISSIGLTEKGQMMNVNAD 166          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_VIBCM (Acetylglutamate kinase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=argB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.178e-14
Identity = 52/162 (32.10%), Postives = 82/162 (50.62%), Query Frame = 2
Query:  347 IVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            +V+K GGAA+  +  +                  R V+VHGGG  ++  + +  ++ V +DGLRVT  + + I++  L G  NK L     K G  AVGLS  DG L          +LG VG+    D T+++ ++ +G +P+I+S+     GQ  N+NAD
Sbjct:    9 LVIKLGGAAL--DCAETLSKLFGAIAQYQNQAQRRIVIVHGGGYLVDDLMAKLQLKSVKKDGLRVTPYDQIPIIAGALAGTANKMLQGQAIKDGINAVGLSLADGGL--CHVEELDPELGAVGKATPGDSTLLQAILATGAMPIISSIGLTAQGQMMNVNAD 166          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_VIBCH (Acetylglutamate kinase OS=Vibrio cholerae GN=argB PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.178e-14
Identity = 52/162 (32.10%), Postives = 82/162 (50.62%), Query Frame = 2
Query:  347 IVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINAD 832
            +V+K GGAA+  +  +                  R V+VHGGG  ++  + +  ++ V +DGLRVT  + + I++  L G  NK L     K G  AVGLS  DG L          +LG VG+    D T+++ ++ +G +P+I+S+     GQ  N+NAD
Sbjct:    9 LVIKLGGAAL--DCAETLSKLFGAIAQYQNQAQRRIVIVHGGGYLVDDLMAKLQLKSVKKDGLRVTPYDQIPIIAGALAGTANKMLQGQAIKDGINAVGLSLADGGL--CHVEELDPELGAVGKATPGDSTLLQAILATGAMPIISSIGLTAQGQMMNVNAD 166          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_SHEB21.436e-1437.30Acetylglutamate kinase OS=Shewanella baltica (stra... [more]
ARGB_PHOPR1.436e-1430.86Acetylglutamate kinase OS=Photobacterium profundum... [more]
ARGB_CENSY1.875e-1433.80Acetylglutamate/acetylaminoadipate kinase OS=Cenar... [more]
ARGB_AZOPC1.875e-1430.77Acetylglutamate kinase OS=Azobacteroides pseudotri... [more]
ARGB_MORAB2.449e-1437.30Acetylglutamate kinase OS=Moritella abyssi GN=argB... [more]
ARGB_DEIRA2.449e-1436.59Acetylglutamate/acetylaminoadipate kinase OS=Deino... [more]
ARG56_SCHPO3.199e-1433.86Protein arg11, mitochondrial OS=Schizosaccharomyce... [more]
ARGB_VIBHB4.178e-1431.48Acetylglutamate kinase OS=Vibrio harveyi (strain A... [more]
ARGB_VIBCM4.178e-1432.10Acetylglutamate kinase OS=Vibrio cholerae serotype... [more]
ARGB_VIBCH4.178e-1432.10Acetylglutamate kinase OS=Vibrio cholerae GN=argB ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
back to top