CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935524_ssr65 microsatellite CK935524_ssr65:65..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CALS8 (Acetylglutamate kinase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=argB PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.360e-39
Identity = 88/188 (46.81%), Postives = 116/188 (61.70%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPS---PNSDK--LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  IL E+LP+IQK  GKT+V+KYGG AM  ++  N                  P++VHGGGPEIN  LK+  +E  F +GLRVTD  TME+  MVLVG+ NK LVS++N+ G  A+G+ G+DG L  AR      N +K  LG+VGEV  ++  V+E L    +IPV+A +   E G SYNINADTV
Sbjct:   11 KASILIEALPYIQKLYGKTVVIKYGGNAMINDKLKNWVMEDITLLKYIGV---NPIVVHGGGPEINSVLKKLNVESQFVNGLRVTDMQTMEVAQMVLVGKTNKELVSMLNQKGGKAIGICGIDGNLIQARKHYEIVNGEKVDLGYVGEVVSINAKVLEMLAKDEYIPVVAPIGVGEDGTSYNINADTV 195          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_DESMR (Acetylglutamate kinase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=argB PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.092e-38
Identity = 92/193 (47.67%), Postives = 116/193 (60.10%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  +L E+LP+I+ F G+T+V+KYGG AM   Q                     PV+VHGGGP+I   LK   IE  F+ GLRVTD  TM++V MVLVG+VNK++V+LIN  G +AVGLSG DGRL TAR            P    LG VGEV  ++  +I  L+  G IPVIA V  DE G++YNINADTV
Sbjct:    7 KAHLLLEALPYIRNFYGQTVVIKYGGHAMVDEQLQESFALNVILLKYIGI---NPVIVHGGGPQIGRMLKLLNIESQFKQGLRVTDDATMDVVEMVLVGKVNKNIVNLINLKGGSAVGLSGKDGRLITARKLEMVLERGDAPPEIIDLGKVGEVTGINTQLITTLLAQGFIPVIAPVGVDEDGETYNINADTV 196          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ANATD (Acetylglutamate kinase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=argB PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.432e-38
Identity = 87/188 (46.28%), Postives = 115/188 (61.17%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPS---PNSDK--LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  IL E+LP+IQK  GKT+V+KYGG AM   +  N                  P++VHGGGP+IN  LK+  +E  F +GLRVTD  TME+  MVLVG+ NK LVS++N+ G  A+G+ G+DG L  AR      N +K  LG+VGEV  ++  V+E L    +IPV+A +   E G SYNINADTV
Sbjct:   11 KASILIEALPYIQKLYGKTVVIKYGGNAMINEKLKNWVMEDITLLKYIGV---NPIVVHGGGPDINSVLKKLNVESQFVNGLRVTDMQTMEVAQMVLVGKTNKELVSMLNQKGGKAIGICGIDGNLIQARKHYEYVNGEKIDLGYVGEVVSINAKVLEMLAKDEYIPVVAPIGVGEDGTSYNINADTV 195          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CARHZ (Acetylglutamate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=argB PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 4.149e-38
Identity = 88/192 (45.83%), Postives = 118/192 (61.46%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTA------RPSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  +L E+LP+I+KF GKTIV+KYGG AM     D                   PV+VHGGGPEI+  L +  I+  F +GLRVTD  T+E+V MVLVG+VNK +V LI KAG  AVGLSG D  L  A       P P  ++   LG+VGE++ V+P ++  L++ G+IPV+A V ++  G+ YNINAD V
Sbjct:    7 KTKVLIEALPYIKKFYGKTIVIKYGGHAMV---SDQLKEAVINDLVLMKFVGINPVVVHGGGPEISRMLNKLNIKSNFINGLRVTDEATLEVVEMVLVGKVNKEIVGLIEKAGGKAVGLSGKDAGLIKAHKKLAKNPEPTGEEYLDLGYVGEISEVNPEILLTLIDKGYIPVVAPVGSNGSGEFYNINADEV 195          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CHRSD (Acetylglutamate kinase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=argB PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.207e-37
Identity = 91/193 (47.15%), Postives = 114/193 (59.07%), Query Frame = 2
Query:  293 VDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            V+ILSE+LP+IQ+F GKT+VVKYGG AM    +D                   PV+VHGGGP+I   L+R  IE  F  G+RVTDA TM++V MVL G VNKS+V+LIN++G  A+GL+G DG   TAR            +P    +G VGEV  +   +IE L     IPVIA +  D  G SYNINAD V
Sbjct:   12 VEILSEALPYIQRFSGKTVVVKYGGNAMT---EDTLIDSFARDMVLMKEVGINPVVVHGGGPQIGELLERLNIESRFVGGMRVTDAETMDVVEMVLGGLVNKSIVNLINRSGGKAIGLTGKDGAQITARQLRVEHQTPEMTAPEIIDIGHVGEVEHIATDLIEMLAARDFIPVIAPIGVDAEGHSYNINADLV 201          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SYMTH (Acetylglutamate kinase OS=Symbiobacterium thermophilum GN=argB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.577e-37
Identity = 87/187 (46.52%), Postives = 113/187 (60.43%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTA-------RPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +L+E+LP+I++F GKT+V+KYGGAAM      +                  P++VHGGGPE++   +R GIEP F DGLRVTDA TMEI  MVLVG+ N+ +V+ +   G  AVGLSG D  L  A       R +     LGFVG+VA VD  V+  L  +G++PVIA +     GQ YNINADTV
Sbjct:   11 VLAEALPYIREFSGKTVVIKYGGAAMAAA---DLKAAVMQDIALMKYVGMHPIVVHGGGPEVSELARRMGIEPQFVDGLRVTDAATMEIAQMVLVGKTNREIVTHLCAQGVKAVGLSGQDAGLIRAARHLHRSRETGEMVDLGFVGDVAAVDTEVLTTLTTAGYVPVIAPIGVGPGGQPYNINADTV 194          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_NITMU (Acetylglutamate kinase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=argB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.577e-37
Identity = 91/198 (45.96%), Postives = 118/198 (59.60%), Query Frame = 2
Query:  269 TQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK--------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +Q  ++ +  IL+E+LP+IQ+F GKTIV+KYGG AM    ++N                  PV+VHGGGP+IN  LKR G +  F  G+RVTDA TM++V MVL G +NK +V+LIN+ G  AVGL+G DG    A+     DK        LG VGE+  +DP +IE L     IPVIA V     G+SYNINAD V
Sbjct:    3 SQPSSQDKAKILAEALPYIQRFHGKTIVIKYGGNAMT---EENLKKCFAHDVALLKVVGMNPVIVHGGGPQINDMLKRVGKQGAFIQGMRVTDAETMDVVEMVL-GLINKEIVNLINQHGGRAVGLTGKDGSFIRAKKMLVRDKERGQEWVDLGQVGEIEGIDPALIELLETRDFIPVIAPVGVGSRGESYNINADLV 196          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_AGRT5 (Acetylglutamate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=argB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.577e-37
Identity = 90/200 (45.00%), Postives = 117/200 (58.50%), Query Frame = 2
Query:  269 TQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            T + +E +  +L+++LPF+QK+  KTIVVKYGG AM  +                      P++VHGGGP+I   L + GIE  F  GLRVTDA T+EIV MVL G +NK +V+LIN+ G  A+GL G DG +  A         P  N ++   LGFVGEV  VD T+++ L  S  IPVIA VA    G +YNINADT
Sbjct:    2 TSSESEIQARLLAQALPFMQKYENKTIVVKYGGHAMGDS---TLGKAFAEDIALLKQSGINPIVVHGGGPQIGAMLSKMGIESKFEGGLRVTDAKTVEIVEMVLAGSINKEIVALINQTGEWAIGLCGKDGNMVFAEKAKKTVIDPDSNIERVLDLGFVGEVVEVDRTLLDLLAKSEMIPVIAPVAPGRDGATYNINADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_DESVV (Acetylglutamate kinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=argB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.059e-37
Identity = 88/196 (44.90%), Postives = 118/196 (60.20%), Query Frame = 2
Query:  281 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            A  +  +L ESLP++++F G+T+V+KYGG AMK    +                   PV+VHGGGP+I   L++  I+  FR+GLRVTD  TM++V MVLVG+VNK +V+ +N AGA AVGLSG DG L  AR           +P    LG VGEV  V+ T++  L   G +PVIA V  D+ G++YNINAD V
Sbjct:    7 ARLQSKVLIESLPYLRQFHGETVVIKYGGHAMKD---EALKKAFALNVALLKLVGINPVIVHGGGPQIGKMLEQLNIQSHFREGLRVTDDATMDVVEMVLVGKVNKEIVNQMNLAGAKAVGLSGKDGMLIRARKMEMVISKEAQAPEIIDLGKVGEVMGVNTTLLRSLERDGFVPVIAPVGVDDNGETYNINADAV 199          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_DESVH (Acetylglutamate kinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=argB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.059e-37
Identity = 88/196 (44.90%), Postives = 118/196 (60.20%), Query Frame = 2
Query:  281 AEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            A  +  +L ESLP++++F G+T+V+KYGG AMK    +                   PV+VHGGGP+I   L++  I+  FR+GLRVTD  TM++V MVLVG+VNK +V+ +N AGA AVGLSG DG L  AR           +P    LG VGEV  V+ T++  L   G +PVIA V  D+ G++YNINAD V
Sbjct:    7 ARLQSKVLIESLPYLRQFHGETVVIKYGGHAMKD---EALKKAFALNVALLKLVGINPVIVHGGGPQIGKMLEQLNIQSHFREGLRVTDDATMDVVEMVLVGKVNKEIVNQMNLAGAKAVGLSGKDGMLIRARKMEMVISKEAQAPEIIDLGKVGEVMGVNTTLLRSLERDGFVPVIAPVGVDDNGETYNINADAV 199          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_CALS88.360e-3946.81Acetylglutamate kinase OS=Caldicellulosiruptor sac... [more]
ARGB_DESMR1.092e-3847.67Acetylglutamate kinase OS=Desulfovibrio magneticus... [more]
ARGB_ANATD2.432e-3846.28Acetylglutamate kinase OS=Anaerocellum thermophilu... [more]
ARGB_CARHZ4.149e-3845.83Acetylglutamate kinase OS=Carboxydothermus hydroge... [more]
ARGB_CHRSD1.207e-3747.15Acetylglutamate kinase OS=Chromohalobacter salexig... [more]
ARGB_SYMTH1.577e-3746.52Acetylglutamate kinase OS=Symbiobacterium thermoph... [more]
ARGB_NITMU1.577e-3745.96Acetylglutamate kinase OS=Nitrosospira multiformis... [more]
ARGB_AGRT51.577e-3745.00Acetylglutamate kinase OS=Agrobacterium tumefacien... [more]
ARGB_DESVV2.059e-3744.90Acetylglutamate kinase OS=Desulfovibrio vulgaris s... [more]
ARGB_DESVH2.059e-3744.90Acetylglutamate kinase OS=Desulfovibrio vulgaris (... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
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