CK935524

Overview
NameCK935524
Unique NameCK935524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Developing fruit 24 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK935524_ssr65 microsatellite CK935524_ssr65:65..82. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2619 contig Csv1_Contig2619:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_DESRM (Acetylglutamate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=argB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.059e-37
Identity = 88/185 (47.57%), Postives = 115/185 (62.16%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSD--KLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  IL E+LP+I+KF GKTIV+KYGG AM      +                  PV+VHGGGPEI   L R GIE  F  GLRVTDA TME+V MVL G++NK +V+LIN  G  +VGLSG D  L  A    ++D   +GFVGEV  V+P +++ ++  G+IPV++ V     G++YNINADTV
Sbjct:    7 KAGILVEALPYIKKFSGKTIVIKYGGHAML---NADLKKAVMTDLVLMKFVGINPVVVHGGGPEITGMLHRLGIESQFVSGLRVTDAPTMEVVEMVL-GKLNKEIVALINGLGGRSVGLSGKDANLIMANKKYSNDCQDIGFVGEVTGVNPQLLQTVIQEGYIPVVSPVGISTEGETYNINADTV 187          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_CYAME (Acetylglutamate kinase OS=Cyanidioschyzon merolae GN=argB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.059e-37
Identity = 85/185 (45.95%), Postives = 115/185 (62.16%), Query Frame = 2
Query:  284 EFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            + RV +L+E+LP+IQK+R + +V+KYGGA +K +                     + V+VHGGGP IN WLK+    P + +G+RVTD  TMEIV MVL G+VNK LV  IN  G  A+GL G D  L  A+ S +  +LG VGE+ ++ P VI+ L+   +IPVIASVAA   G +YN+NAD V
Sbjct:   16 DLRVQVLTEALPYIQKWRNEIMVIKYGGAVVKQDAD------IIKDILFLTCCGFQIVVVHGGGPLINEWLKQLNKSPQYWEGIRVTDKVTMEIVEMVLAGKVNKQLVGSINANGGKAIGLCGKDANLIVAKAS-SKKELGLVGEIEQIHPQVIDMLLEKHYIPVIASVAASHDGTTYNLNADVV 193          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_BORA1 (Acetylglutamate kinase OS=Bordetella avium (strain 197N) GN=argB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 2.059e-37
Identity = 91/206 (44.17%), Postives = 122/206 (59.22%), Query Frame = 2
Query:  260 VTDTQTPAEF-----RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK--------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +TDT  PA       +  ILSE+LP+I++F GKTIVVKYGG AM    ++                   PV+VHGGGP+I+  L+R G +  F  G+RVTDA TME+V  VL G+V + +V +IN+AG  AVGL+G DG L  AR    +DK        +G VG+V RV+P V++ L +   IPVI+ +   E G +YNINAD V
Sbjct:    1 MTDTPDPAAVLSPAVKAAILSEALPYIRRFHGKTIVVKYGGNAMT---EERLQRSFAHDVVLLKLVGLNPVVVHGGGPQIDDALRRLGKQGTFVQGMRVTDAETMEVVEWVLGGQVQQDIVMMINEAGGKAVGLTGKDGMLLQARKKLMADKEKPGELLDIGLVGDVTRVEPAVVKALQDDQFIPVISPIGYGEDGTAYNINADVV 203          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SACD2 (Acetylglutamate kinase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=argB PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.689e-37
Identity = 92/201 (45.77%), Postives = 119/201 (59.20%), Query Frame = 2
Query:  269 TQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTA------RPSPNSD-----KLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            TQ  A     +L+E+LP+IQ+F GKTIVVK+GG AM   +  N                  P++VHGGGP+I   LK+  IE  F DG+RVTD+ TM++V MVL G VNK +VSLIN+ G  A+G++G DG L  A      R SP         +G VGEV  ++ +VI+ LVNS  IPVIA +   + G SYNINAD V
Sbjct:    3 TQDQALEVAKVLTEALPYIQRFTGKTIVVKFGGNAMTDTELQNSFARDIVLMKLVGM---NPIVVHGGGPQIGDLLKKLNIESSFVDGMRVTDSATMDVVEMVLGGTVNKQIVSLINRNGGQAIGVTGKDGNLIHAKKLTVNRKSPEVQASEIIDIGHVGEVKTINRSVIDVLVNSDFIPVIAPIGVGDDGASYNINADLV 200          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_PSEU5 (Acetylglutamate kinase OS=Pseudomonas stutzeri (strain A1501) GN=argB PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.689e-37
Identity = 88/191 (46.07%), Postives = 115/191 (60.21%), Query Frame = 2
Query:  299 ILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +LSE+LP+I++F GKT+V+KYGG AM   + +                   PV+VHGGGP+I   LKR  IE  F DG+RVTD+ TM++V MVL G+VNKS+VSLIN+ G +A+GL+G D  L  AR             P    +G VGEV  V+  ++E LV    IPVIA +   E G+SYNINAD V
Sbjct:   14 VLSEALPYIRRFVGKTLVIKYGGNAM---ESEELKTGFARDIVLMKAVGINPVVVHGGGPQIGDLLKRLNIESHFIDGMRVTDSQTMDVVEMVLGGQVNKSIVSLINQHGGSAIGLTGKDAGLIRARKLKATRQTPEMTKPEIIDIGHVGEVTGVNAELLEMLVQGNFIPVIAPIGVGENGESYNINADLV 201          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_ACIC1 (Acetylglutamate kinase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=argB PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.689e-37
Identity = 91/196 (46.43%), Postives = 121/196 (61.73%), Query Frame = 2
Query:  275 TPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTA-RPSPNSD----KLGFVGEVARVDPTVIEPLVNSGHIPVIASVA--ADEFGQS--YNINADT 835
            T  + +   L E+LP++  F G+T+V+KYGG AM                        RPV+VHGGGP+I+  L+R GIEPVF  GLRVT   TM++V MVLVG+V + +V L+N  G  AVG+SG DGRLFTA R S   D     LG VGE+  V+PTVI+ L++ GH+PV++S+A   D  G+   YN+NADT
Sbjct:    6 TAVQAKAATLVEALPWLATFHGRTVVIKYGGHAMID---PGLAASFAADVVFLRYAGLRPVVVHGGGPQIDAMLRRLGIEPVFAAGLRVTTPETMDVVRMVLVGQVQREVVGLLNAHGPFAVGVSGEDGRLFTAVRRSAVVDGHDVDLGLVGEITEVNPTVIQSLLDDGHVPVVSSIAGGVDSDGRRCVYNVNADT 198          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_METJA (Probable acetylglutamate kinase OS=Methanocaldococcus jannaschii GN=argB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.587e-37
Identity = 85/193 (44.04%), Postives = 116/193 (60.10%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTARPSPNSDK----------LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            + +IL E+LPFIQKF GK  V+KYGG AM   +  N                  PV+VHGGGPEIN  +++ G +P F  GLRVTD  T++IV MVL G++N  +VS ++K G  AVGLSG  GR+  A+      K          LG VGE   V+  ++E L+N+G+IPV++ +  DE G++YN+NADTV
Sbjct:   11 KAEILMEALPFIQKFYGKIFVIKYGGHAMIDEKAKNWTAQDVVLLKYVGI---NPVVVHGGGPEINKAMEKMGKKPEFVHGLRVTDEETLDIVEMVLAGKINGDIVSKLSKFGGKAVGLSGKSGRIILAKKKLKKIKTEKGEEIEVDLGRVGETVEVNTELLEILINNGYIPVVSPIGLDEKGEAYNLNADTV 200          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_SYNFM (Acetylglutamate kinase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=argB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.991e-37
Identity = 89/194 (45.88%), Postives = 114/194 (58.76%), Query Frame = 2
Query:  290 RVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR-----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            +  IL E+LP+I++F GKT+V+KYGG AM   +                     PV+VHGGGP+I   LKR G E  F  G+RVTDA+TM+IV MVL G++NK +VSLIN+ G  AVGLSG DG L  AR             P    +G VGEV RV+ ++++ L     IPVIA V   E G++YNINAD V
Sbjct:    4 KAGILIEALPYIRRFYGKTVVIKYGGNAMVAEELKESFAKDIVLMKYIGI---NPVVVHGGGPQIGRMLKRIGKESDFCAGMRVTDADTMDIVEMVLAGKINKEIVSLINRHGGHAVGLSGKDGNLIEARKLHVYRYKGDDQPPEIIDIGLVGEVNRVNVSILDTLAGGNLIPVIAPVGVGEQGETYNINADLV 194          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_DESDG (Acetylglutamate kinase OS=Desulfovibrio desulfuricans (strain G20) GN=argB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.991e-37
Identity = 88/194 (45.36%), Postives = 117/194 (60.31%), Query Frame = 2
Query:  287 FRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR----------PSPNSDKLGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADTV 838
            F+  +L ESLP+ ++F G+T+V+KYGG AM     ++                  PV+VHGGGP+I   L++  I   FR+GLRVTD  TM++V MVLVG+VNK +V+L+N +GA AVGLSG DG+L  AR           +P    LG VGEV  V+  ++  L   G IPVIA V  DE G++YNINAD V
Sbjct:    6 FKSKVLIESLPYFRQFSGETVVIKYGGNAMID---ESLKQAFALNIVLLKYVGVNPVVVHGGGPQIGRMLQQLNIPTNFREGLRVTDDATMDVVEMVLVGKVNKQIVNLLNLSGAKAVGLSGKDGQLIRARQMEMVISKEAQAPEIIDLGKVGEVTGVETKLLHSLQRDGFIPVIAPVGVDENGETYNINADLV 196          
BLAST of CK935524 vs. ExPASy Swiss-Prot
Match: ARGB_GRABC (Acetylglutamate kinase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=argB PE=3 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 7.825e-37
Identity = 94/202 (46.53%), Postives = 117/202 (57.92%), Query Frame = 2
Query:  263 TDTQTPAEFRVDILSESLPFIQKFRGKTIVVKYGGAAMKPNQKDNXXXXXXXXXXXXXXXXXRPVLVHGGGPEINFWLKRFGIEPVFRDGLRVTDANTMEIVSMVLVGRVNKSLVSLINKAGATAVGLSGMDGRLFTAR--------PSPNSDK---LGFVGEVARVDPTVIEPLVNSGHIPVIASVAADEFGQSYNINADT 835
            TD    A  +  IL+ +LPF++++ G T+VVKYGG AM     +                   PV+VHGGGP+IN  LKR  I+  F DGLRVTDA  +E+V MVL G VNK +  LIN+AGA AVG+ G DG L  AR        P  + +K   LGFVGE A +D  VI  L  +G IPVIA V   E GQ+YNINAD+
Sbjct:    3 TDDFGSAGEQARILAHALPFMRRYAGATVVVKYGGHAMGD---ERLAEQFGADIALLKQVGINPVVVHGGGPQINDMLKRLAIQSRFVDGLRVTDAAMVEVVEMVLAGTVNKMVAGLINRAGAMAVGICGKDGGLIHARKLQRTAIDPDSHIEKALDLGFVGEPAHIDVRVIHALTGAGLIPVIAPVGIGEDGQTYNINADS 201          
The following BLAST results are available for this feature:
BLAST of CK935524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARGB_DESRM2.059e-3747.57Acetylglutamate kinase OS=Desulfotomaculum reducen... [more]
ARGB_CYAME2.059e-3745.95Acetylglutamate kinase OS=Cyanidioschyzon merolae ... [more]
ARGB_BORA12.059e-3744.17Acetylglutamate kinase OS=Bordetella avium (strain... [more]
ARGB_SACD22.689e-3745.77Acetylglutamate kinase OS=Saccharophagus degradans... [more]
ARGB_PSEU52.689e-3746.07Acetylglutamate kinase OS=Pseudomonas stutzeri (st... [more]
ARGB_ACIC12.689e-3746.43Acetylglutamate kinase OS=Acidothermus cellulolyti... [more]
ARGB_METJA4.587e-3744.04Probable acetylglutamate kinase OS=Methanocaldococ... [more]
ARGB_SYNFM5.991e-3745.88Acetylglutamate kinase OS=Syntrophobacter fumaroxi... [more]
ARGB_DESDG5.991e-3745.36Acetylglutamate kinase OS=Desulfovibrio desulfuric... [more]
ARGB_GRABC7.825e-3746.53Acetylglutamate kinase OS=Granulibacter bethesdens... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004554_F05 Developing fruit 24 DAFB Citrus sinensis cDNA clone T24DAB0004_IIIF_F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935524 ID=CK935524; Name=CK935524; organism=Citrus sinensis; type=EST; length=893bp
GGGGCTGCCCGAAGTGAGGAAGGAAGAGTCTCTCTGAACCCAAGCAATAT
CTGCGGAGAATATGGCCGCCGCCGCCGCCGCCTCCCTAGAAATTGCTCCT
TTTTTACAGTCACAGCTTTCATTCTCATCAAAGTCAAAAGCAGGCTCTCA
TTCTCCCTCCATCTTCAAAATCAAAACCCCACATGTCGAGAATTTCGCTT
CGAACCACCGCACCGAAATAACAAAATCATCCCGCTCTCTCACATCAGCA
GCAACAGCCGTAACTGACACACAGACCCCAGCCGAGTTCCGTGTCGACAT
TCTTTCCGAATCTCTTCCCTTCATTCAGAAATTCCGCGGAAAGACCATCG
TCGTCAAATACGGCGGCGCCGCTATGAAACCCAACCAAAAGGACAACCTC
CTCGCCTCCGTCGTAAAAGACCTCGTTCTCCTGTCCGTTGTGGGACTCCG
TCCTGTCTTGGTCCACGGCGGCGGTCCTGAGATCAATTTCTGGCTTAAAC
GTTTCGGAATCGAGCCCGTTTTCCGTGACGGCCTCCGCGTCACTGATGCC
AACACTATGGAGATCGTGTCCATGGTTCTGGTGGGGAGGGTGAACAAGAG
CTTGGTTTCTCTCATCAACAAAGCCGGCGCCACCGCGGTTGGGCTCTCGG
GCATGGACGGGCGCCTCTTCACGGCCCGGCCCAGCCCAAACTCCGATAAA
CTGGGTTTCGTTGGTGAGGTAGCCCGCGTGGACCCCACGGTCATTGAGCC
TCTGGTAAACAGTGGACACATACCAGTGATTGCTTCTGTGGCTGCGGATG
AGTTTGGGCAATCTTATAACATCAATGCGGACACTGTGGCTGGGGAACTG
GCGGCGGCATTGGGTGCTGAGAAGCTGATATTGTTGACTGATG
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